RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
PGBD2-203ENST00000462488 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
PGBD2-203ENST00000462488 EYA1Q99502 592 aa11.3□□□□□ -0.6
PGBD2-203ENST00000462488 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
PGBD2-203ENST00000462488 KCNQ2O43526 872 aa11.29□□□□□ -0.6
PGBD2-203ENST00000462488 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
PGBD2-203ENST00000462488 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
PGBD2-203ENST00000462488 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
PGBD2-203ENST00000462488 SBF2Q86WG5 1849 aa11.29□□□□□ -0.6
PGBD2-203ENST00000462488 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
PGBD2-203ENST00000462488 MTHFSP49914 203 aa11.28□□□□□ -0.6
PGBD2-203ENST00000462488 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
PGBD2-203ENST00000462488 PTF1AQ7RTS3 328 aa11.28□□□□□ -0.6
PGBD2-203ENST00000462488 MEGF6O75095 1541 aa11.28□□□□□ -0.6
PGBD2-203ENST00000462488 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
PGBD2-203ENST00000462488 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
PGBD2-203ENST00000462488 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
PGBD2-203ENST00000462488 PLSCR1O15162 318 aa11.27□□□□□ -0.61
PGBD2-203ENST00000462488 PRIM1P49642 420 aaKnown RBP11.27□□□□□ -0.61
PGBD2-203ENST00000462488 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
PGBD2-203ENST00000462488 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
PGBD2-203ENST00000462488 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
PGBD2-203ENST00000462488 SULT6B1Q6IMI4 303 aa11.25□□□□□ -0.61
PGBD2-203ENST00000462488 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
PGBD2-203ENST00000462488 CFAP53Q96M91 514 aa11.25□□□□□ -0.61
PGBD2-203ENST00000462488 BCL9O00512 1426 aa11.25□□□□□ -0.61
PGBD2-203ENST00000462488 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
PGBD2-203ENST00000462488 TXNRD1Q16881 649 aa11.24□□□□□ -0.61
PGBD2-203ENST00000462488 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
PGBD2-203ENST00000462488 HMOX1P09601 288 aa11.23□□□□□ -0.61
PGBD2-203ENST00000462488 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
PGBD2-203ENST00000462488 C1orf141Q5JVX7 400 aa11.23□□□□□ -0.61
PGBD2-203ENST00000462488 IFNL2Q8IZJ0 200 aa11.23□□□□□ -0.61
PGBD2-203ENST00000462488 NHSQ6T4R5 1651 aa11.23□□□□□ -0.61
PGBD2-203ENST00000462488 BTAF1O14981 1849 aa11.22□□□□□ -0.61
PGBD2-203ENST00000462488 CYP27B1O15528 508 aa11.22□□□□□ -0.61
PGBD2-203ENST00000462488 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
PGBD2-203ENST00000462488 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
PGBD2-203ENST00000462488 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.61
PGBD2-203ENST00000462488 NPC1L1Q9UHC9 1359 aa11.21□□□□□ -0.61
PGBD2-203ENST00000462488 IL13P35225 146 aa11.21□□□□□ -0.61
PGBD2-203ENST00000462488 AMOTQ4VCS5 1084 aa11.21□□□□□ -0.61
PGBD2-203ENST00000462488 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
PGBD2-203ENST00000462488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.61
PGBD2-203ENST00000462488 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.61
PGBD2-203ENST00000462488 HSP90AB1P08238 724 aaKnown RBP11.2□□□□□ -0.62
PGBD2-203ENST00000462488 PHKG2P15735 406 aa11.2□□□□□ -0.62
PGBD2-203ENST00000462488 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
PGBD2-203ENST00000462488 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
PGBD2-203ENST00000462488 NUP188Q5SRE5 1749 aa11.19□□□□□ -0.62
PGBD2-203ENST00000462488 SHANK3Q9BYB0 1731 aa11.19□□□□□ -0.62
PGBD2-203ENST00000462488 KCNQ4P56696 695 aa11.19□□□□□ -0.62
PGBD2-203ENST00000462488 PROM2Q8N271 834 aa11.19□□□□□ -0.62
PGBD2-203ENST00000462488 RREB1Q92766 1687 aa11.19□□□□□ -0.62
PGBD2-203ENST00000462488 PPP2R1AP30153 589 aa11.18□□□□□ -0.62
PGBD2-203ENST00000462488 CABP4P57796 275 aa11.18□□□□□ -0.62
PGBD2-203ENST00000462488 SLC27A3Q5K4L6 730 aa11.18□□□□□ -0.62
PGBD2-203ENST00000462488 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
PGBD2-203ENST00000462488 PPP1R1BQ9UD71 204 aaPredicted RBP11.18□□□□□ -0.62
PGBD2-203ENST00000462488 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
PGBD2-203ENST00000462488 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
PGBD2-203ENST00000462488 NEFMP07197 916 aa11.17□□□□□ -0.62
PGBD2-203ENST00000462488 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
PGBD2-203ENST00000462488 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
PGBD2-203ENST00000462488 SLC15A2Q16348 729 aa11.17□□□□□ -0.62
PGBD2-203ENST00000462488 DCAF5Q96JK2 942 aa11.17□□□□□ -0.62
PGBD2-203ENST00000462488 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
PGBD2-203ENST00000462488 TFCP2L1Q9NZI6 479 aa11.17□□□□□ -0.62
PGBD2-203ENST00000462488 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
PGBD2-203ENST00000462488 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
PGBD2-203ENST00000462488 HMGB2P26583 209 aaKnown RBP11.16□□□□□ -0.62
PGBD2-203ENST00000462488 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
PGBD2-203ENST00000462488 PIGBQ92521 554 aa11.16□□□□□ -0.62
PGBD2-203ENST00000462488 PALLDQ8WX93 1383 aa11.16□□□□□ -0.62
PGBD2-203ENST00000462488 ITGB4P16144 1822 aa11.15□□□□□ -0.62
PGBD2-203ENST00000462488 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
PGBD2-203ENST00000462488 ZBTB7AO95365 584 aa11.15□□□□□ -0.62
PGBD2-203ENST00000462488 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
PGBD2-203ENST00000462488 SPON1Q9HCB6 807 aa11.15□□□□□ -0.62
PGBD2-203ENST00000462488 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
PGBD2-203ENST00000462488 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
PGBD2-203ENST00000462488 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
PGBD2-203ENST00000462488 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
PGBD2-203ENST00000462488 ATP6V1AP38606 617 aa11.13□□□□□ -0.63
PGBD2-203ENST00000462488 RALBP1Q15311 655 aa11.13□□□□□ -0.63
PGBD2-203ENST00000462488 AK7Q96M32 723 aa11.13□□□□□ -0.63
PGBD2-203ENST00000462488 ASAP1Q9ULH1 1129 aa11.13□□□□□ -0.63
PGBD2-203ENST00000462488 KDRP35968 1356 aa11.13□□□□□ -0.63
PGBD2-203ENST00000462488 LOC102724428A0A0B4J2F2 783 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 SIK1P57059 783 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
PGBD2-203ENST00000462488 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 GAS2L2Q8NHY3 880 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
PGBD2-203ENST00000462488 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
PGBD2-203ENST00000462488 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
PGBD2-203ENST00000462488 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms