RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 NBPF4Q96M43 638 aa24.87■■□□□ 1.57
SSB-206ENST00000461708 FLT4P35916 1363 aa24.86■■□□□ 1.57
SSB-206ENST00000461708 DCAF8L1A6NGE4 600 aa24.86■■□□□ 1.57
SSB-206ENST00000461708 CARD14Q9BXL6 1004 aa24.86■■□□□ 1.57
SSB-206ENST00000461708 LRRC4BQ9NT99 713 aa24.85■■□□□ 1.57
SSB-206ENST00000461708 ATF5Q9Y2D1 282 aaPredicted RBP24.84■■□□□ 1.57
SSB-206ENST00000461708 PRIM1P49642 420 aaKnown RBP24.83■■□□□ 1.57
SSB-206ENST00000461708 HSP90AB2PQ58FF8 381 aa24.83■■□□□ 1.57
SSB-206ENST00000461708 RAPGEF4Q8WZA2 1011 aa24.83■■□□□ 1.57
SSB-206ENST00000461708 SGIP1Q9BQI5 828 aa24.83■■□□□ 1.57
SSB-206ENST00000461708 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
SSB-206ENST00000461708 QSER1Q2KHR3 1735 aa24.82■■□□□ 1.56
SSB-206ENST00000461708 NSD3Q9BZ95 1437 aa24.82■■□□□ 1.56
SSB-206ENST00000461708 NSD2O96028 1365 aa24.81■■□□□ 1.56
SSB-206ENST00000461708 ZNF827Q17R98 1081 aa24.81■■□□□ 1.56
SSB-206ENST00000461708 AKT1S1Q96B36 256 aa24.81■■□□□ 1.56
SSB-206ENST00000461708 LY75O60449 1722 aa24.81■■□□□ 1.56
SSB-206ENST00000461708 SYTL4Q96C24 671 aaPredicted RBP24.8■■□□□ 1.56
SSB-206ENST00000461708 TATP17735 454 aaPredicted RBP24.79■■□□□ 1.56
SSB-206ENST00000461708 SLC16A10Q8TF71 515 aa24.79■■□□□ 1.56
SSB-206ENST00000461708 USHBP1Q8N6Y0 703 aa24.78■■□□□ 1.56
SSB-206ENST00000461708 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
SSB-206ENST00000461708 ANKRD26Q9UPS8 1709 aa24.78■■□□□ 1.56
SSB-206ENST00000461708 PCDH11XQ9BZA7 1347 aa24.76■■□□□ 1.55
SSB-206ENST00000461708 PCDH11YQ9BZA8 1340 aa24.76■■□□□ 1.55
SSB-206ENST00000461708 NCAPD2Q15021 1401 aa24.76■■□□□ 1.55
SSB-206ENST00000461708 YY1P25490 414 aa24.75■■□□□ 1.55
SSB-206ENST00000461708 SYT17Q9BSW7 474 aa24.75■■□□□ 1.55
SSB-206ENST00000461708 FHDC1Q9C0D6 1143 aaPredicted RBP24.75■■□□□ 1.55
SSB-206ENST00000461708 MAP3K5Q99683 1374 aa24.75■■□□□ 1.55
SSB-206ENST00000461708 HMGB2P26583 209 aaKnown RBP24.74■■□□□ 1.55
SSB-206ENST00000461708 ARXQ96QS3 562 aa24.74■■□□□ 1.55
SSB-206ENST00000461708 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
SSB-206ENST00000461708 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
SSB-206ENST00000461708 WASHC2AQ641Q2 1341 aa24.73■■□□□ 1.55
SSB-206ENST00000461708 PNPLA7Q6ZV29 1317 aa24.71■■□□□ 1.55
SSB-206ENST00000461708 MAP2P11137 1827 aaKnown RBP24.71■■□□□ 1.55
SSB-206ENST00000461708 TFCP2L1Q9NZI6 479 aa24.71■■□□□ 1.55
SSB-206ENST00000461708 CCNL1Q9UK58 526 aaPredicted RBP24.71■■□□□ 1.55
SSB-206ENST00000461708 PKD1L3Q7Z443 1732 aa24.71■■□□□ 1.55
SSB-206ENST00000461708 CYP27B1O15528 508 aa24.69■■□□□ 1.54
SSB-206ENST00000461708 EIF4G2P78344 907 aaKnown RBP eCLIP24.69■■□□□ 1.54
SSB-206ENST00000461708 TUBGCP6Q96RT7 1819 aa24.69■■□□□ 1.54
SSB-206ENST00000461708 KCNQ4P56696 695 aa24.68■■□□□ 1.54
SSB-206ENST00000461708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.67■■□□□ 1.543e-7■■■□□ 17.9
SSB-206ENST00000461708 POLKQ9UBT6 870 aa24.67■■□□□ 1.54
SSB-206ENST00000461708 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
SSB-206ENST00000461708 POLD1P28340 1107 aa24.66■■□□□ 1.54
SSB-206ENST00000461708 NKX1-1Q15270 411 aaPredicted RBP24.66■■□□□ 1.54
SSB-206ENST00000461708 PLEKHG2Q9H7P9 1386 aa24.66■■□□□ 1.54
SSB-206ENST00000461708 SPG7Q9UQ90 795 aa24.65■■□□□ 1.54
SSB-206ENST00000461708 ITGB4P16144 1822 aa24.63■■□□□ 1.53
SSB-206ENST00000461708 UTRNP46939 3433 aa24.63■■□□□ 1.53
SSB-206ENST00000461708 HSPA5P11021 654 aaKnown RBP24.63■■□□□ 1.53
SSB-206ENST00000461708 SMARCC1Q92922 1105 aaPredicted RBP24.63■■□□□ 1.53
SSB-206ENST00000461708 EYA1Q99502 592 aa24.63■■□□□ 1.53
SSB-206ENST00000461708 TOGARAM1Q9Y4F4 1720 aa24.62■■□□□ 1.53
SSB-206ENST00000461708 MPRIPQ6WCQ1 1025 aa24.62■■□□□ 1.53
SSB-206ENST00000461708 PALLDQ8WX93 1383 aa24.62■■□□□ 1.53
SSB-206ENST00000461708 C5P01031 1676 aa24.62■■□□□ 1.53
SSB-206ENST00000461708 TAF1LQ8IZX4 1826 aa24.61■■□□□ 1.53
SSB-206ENST00000461708 FLAD1Q8NFF5 587 aa24.6■■□□□ 1.53
SSB-206ENST00000461708 POLR3GLQ9BT43 218 aa24.6■■□□□ 1.53
SSB-206ENST00000461708 CHD4Q14839 1912 aa24.6■■□□□ 1.53
SSB-206ENST00000461708 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
SSB-206ENST00000461708 COL23A1Q86Y22 540 aaPredicted RBP24.58■■□□□ 1.53
SSB-206ENST00000461708 PANK3Q9H999 370 aa24.58■■□□□ 1.53
SSB-206ENST00000461708 EIF4A2Q14240 407 aaKnown RBP24.57■■□□□ 1.52
SSB-206ENST00000461708 PIGBQ92521 554 aa24.57■■□□□ 1.52
SSB-206ENST00000461708 IFNL2Q8IZJ0 200 aa24.55■■□□□ 1.52
SSB-206ENST00000461708 TNNT2P45379 298 aaPredicted RBP24.54■■□□□ 1.52
SSB-206ENST00000461708 IGSF1Q8N6C5 1336 aa24.54■■□□□ 1.52
SSB-206ENST00000461708 C4BP0C0L5 1744 aa24.53■■□□□ 1.52
SSB-206ENST00000461708 PHKG2P15735 406 aa24.53■■□□□ 1.52
SSB-206ENST00000461708 MSH5O43196 834 aa24.52■■□□□ 1.52
SSB-206ENST00000461708 TMOD3Q9NYL9 352 aa24.51■■□□□ 1.51
SSB-206ENST00000461708 GOLGB1Q14789 3259 aaKnown RBP24.51■■□□□ 1.51
SSB-206ENST00000461708 GPR162Q16538 588 aa24.5■■□□□ 1.51
SSB-206ENST00000461708 LOC102724428A0A0B4J2F2 783 aa24.49■■□□□ 1.51
SSB-206ENST00000461708 SIK1P57059 783 aa24.49■■□□□ 1.51
SSB-206ENST00000461708 UBR3Q6ZT12 1888 aa24.49■■□□□ 1.51
SSB-206ENST00000461708 KLHL34Q8N239 644 aa24.48■■□□□ 1.51
SSB-206ENST00000461708 ZNF784Q8NCA9 323 aaPredicted RBP24.48■■□□□ 1.51
SSB-206ENST00000461708 AK7Q96M32 723 aa24.48■■□□□ 1.51
SSB-206ENST00000461708 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
SSB-206ENST00000461708 ERVV-2B6SEH9 535 aa24.46■■□□□ 1.51
SSB-206ENST00000461708 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
SSB-206ENST00000461708 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
SSB-206ENST00000461708 KNSTRNQ9Y448 316 aa24.46■■□□□ 1.51
SSB-206ENST00000461708 SSFA2P28290 1259 aa24.45■■□□□ 1.5
SSB-206ENST00000461708 AMOTQ4VCS5 1084 aa24.45■■□□□ 1.5
SSB-206ENST00000461708 PLEKHO1Q53GL0 409 aaPredicted RBP24.45■■□□□ 1.5
SSB-206ENST00000461708 NLGN2Q8NFZ4 835 aa24.45■■□□□ 1.5
SSB-206ENST00000461708 DCAF5Q96JK2 942 aa24.45■■□□□ 1.5
SSB-206ENST00000461708 CD2APQ9Y5K6 639 aa24.45■■□□□ 1.5
SSB-206ENST00000461708 ATG3Q9NT62 314 aa24.44■■□□□ 1.5
SSB-206ENST00000461708 MSL1Q68DK7 614 aa24.43■■□□□ 1.5
SSB-206ENST00000461708 LINC00116Q8NCU8 138 aa24.43■■□□□ 1.5
SSB-206ENST00000461708 ZNF831Q5JPB2 1677 aa24.43■■□□□ 1.5
SSB-206ENST00000461708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms