RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 TSR2Q969E8 191 aaKnown RBP14.02□□□□□ -0.16
IFT88-204ENST00000461115 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.16
IFT88-204ENST00000461115 ORAI2Q96SN7 254 aa14.02□□□□□ -0.16
IFT88-204ENST00000461115 AMPHP49418 695 aa14.01□□□□□ -0.17
IFT88-204ENST00000461115 PROM2Q8N271 834 aa14.01□□□□□ -0.17
IFT88-204ENST00000461115 IP6K1Q92551 441 aa14.01□□□□□ -0.17
IFT88-204ENST00000461115 EYA1Q99502 592 aa14.01□□□□□ -0.17
IFT88-204ENST00000461115 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
IFT88-204ENST00000461115 MS4A1P11836 297 aa14□□□□□ -0.17
IFT88-204ENST00000461115 ABCC6O95255 1503 aa14□□□□□ -0.17
IFT88-204ENST00000461115 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
IFT88-204ENST00000461115 CRB1P82279 1406 aa13.99□□□□□ -0.17
IFT88-204ENST00000461115 CENPQQ7L2Z9 268 aaPredicted RBP13.99□□□□□ -0.17
IFT88-204ENST00000461115 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
IFT88-204ENST00000461115 KIAA0232Q92628 1395 aa13.99□□□□□ -0.17
IFT88-204ENST00000461115 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 CADPS2Q86UW7 1296 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 ARHGEF25Q86VW2 580 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 CHL1O00533 1208 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 VAMP4O75379 141 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 MBIPQ9NS73 344 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
IFT88-204ENST00000461115 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
IFT88-204ENST00000461115 COL18A1P39060 1754 aa13.97□□□□□ -0.17
IFT88-204ENST00000461115 MED1Q15648 1581 aaPredicted RBP13.97□□□□□ -0.17
IFT88-204ENST00000461115 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
IFT88-204ENST00000461115 KRT28Q7Z3Y7 464 aa13.97□□□□□ -0.17
IFT88-204ENST00000461115 GAS2L2Q8NHY3 880 aa13.97□□□□□ -0.17
IFT88-204ENST00000461115 ARHGAP45Q92619 1136 aa13.97□□□□□ -0.17
IFT88-204ENST00000461115 RBM19Q9Y4C8 960 aaKnown RBP13.97□□□□□ -0.17
IFT88-204ENST00000461115 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
IFT88-204ENST00000461115 PXDNQ92626 1479 aa13.96□□□□□ -0.17
IFT88-204ENST00000461115 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.18
IFT88-204ENST00000461115 FOXO3O43524 673 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 GCP02774 474 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 RLBP1P12271 317 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 ATF3P18847 181 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 HSPA2P54652 639 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.18
IFT88-204ENST00000461115 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
IFT88-204ENST00000461115 MTHFSDQ2M296 383 aaKnown RBP13.95□□□□□ -0.18
IFT88-204ENST00000461115 ATF7IPQ6VMQ6 1270 aa13.95□□□□□ -0.18
IFT88-204ENST00000461115 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
IFT88-204ENST00000461115 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
IFT88-204ENST00000461115 MSH6P52701 1360 aa13.95□□□□□ -0.18
IFT88-204ENST00000461115 FAM83GA6ND36 823 aa13.94□□□□□ -0.18
IFT88-204ENST00000461115 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
IFT88-204ENST00000461115 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
IFT88-204ENST00000461115 MVPQ14764 893 aaKnown RBP13.94□□□□□ -0.18
IFT88-204ENST00000461115 NUTM2GQ5VZR2 741 aa13.94□□□□□ -0.18
IFT88-204ENST00000461115 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
IFT88-204ENST00000461115 SMC4Q9NTJ3 1288 aa13.94□□□□□ -0.18
IFT88-204ENST00000461115 SOX12O15370 315 aa13.93□□□□□ -0.18
IFT88-204ENST00000461115 TRIM27P14373 513 aa13.93□□□□□ -0.18
IFT88-204ENST00000461115 CANXP27824 592 aaKnown RBP13.93□□□□□ -0.18
IFT88-204ENST00000461115 DZIP1LQ8IYY4 767 aaKnown RBP13.93□□□□□ -0.18
IFT88-204ENST00000461115 COG6Q9Y2V7 657 aa13.93□□□□□ -0.18
IFT88-204ENST00000461115 FAM208AQ9UK61 1670 aaKnown RBP13.93□□□□□ -0.18
IFT88-204ENST00000461115 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
IFT88-204ENST00000461115 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
IFT88-204ENST00000461115 FRAT1Q92837 279 aaPredicted RBP13.92□□□□□ -0.18
IFT88-204ENST00000461115 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
IFT88-204ENST00000461115 ADAMTS7Q9UKP4 1686 aa13.92□□□□□ -0.18
IFT88-204ENST00000461115 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
IFT88-204ENST00000461115 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
IFT88-204ENST00000461115 SOS1Q07889 1333 aaPredicted RBP13.91□□□□□ -0.18
IFT88-204ENST00000461115 TWISTNBQ3B726 338 aaPredicted RBP13.91□□□□□ -0.18
IFT88-204ENST00000461115 BCL2L13Q9BXK5 485 aa13.91□□□□□ -0.18
IFT88-204ENST00000461115 CEMIPQ8WUJ3 1361 aa13.91□□□□□ -0.18
IFT88-204ENST00000461115 TSPYL6Q8N831 410 aa13.9□□□□□ -0.18
IFT88-204ENST00000461115 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
IFT88-204ENST00000461115 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
IFT88-204ENST00000461115 TNNQ9UQP3 1299 aa13.9□□□□□ -0.18
IFT88-204ENST00000461115 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
IFT88-204ENST00000461115 MAP3K5Q99683 1374 aa13.9□□□□□ -0.18
IFT88-204ENST00000461115 DCTN1Q14203 1278 aa13.9□□□□□ -0.19
IFT88-204ENST00000461115 NBPF6Q5VWK0 638 aa13.9□□□□□ -0.19
IFT88-204ENST00000461115 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.19
IFT88-204ENST00000461115 NBPF4Q96M43 638 aa13.9□□□□□ -0.19
IFT88-204ENST00000461115 CPDO75976 1380 aa13.89□□□□□ -0.19
IFT88-204ENST00000461115 SPATA31A3Q5VYP0 1347 aa13.89□□□□□ -0.19
IFT88-204ENST00000461115 GNAT3A8MTJ3 354 aa13.89□□□□□ -0.19
IFT88-204ENST00000461115 MCM10Q7L590 875 aa13.89□□□□□ -0.19
IFT88-204ENST00000461115 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
IFT88-204ENST00000461115 NHSL1Q5SYE7 1610 aa13.88□□□□□ -0.19
IFT88-204ENST00000461115 ABCC4O15439 1325 aa13.88□□□□□ -0.19
IFT88-204ENST00000461115 GABBR2O75899 941 aa13.88□□□□□ -0.19
IFT88-204ENST00000461115 IGHDP01880 384 aa13.88□□□□□ -0.19
IFT88-204ENST00000461115 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
IFT88-204ENST00000461115 SIPA1L3O60292 1781 aaPredicted RBP13.87□□□□□ -0.19
IFT88-204ENST00000461115 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
IFT88-204ENST00000461115 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
IFT88-204ENST00000461115 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
IFT88-204ENST00000461115 SOS2Q07890 1332 aaPredicted RBP13.86□□□□□ -0.19
IFT88-204ENST00000461115 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
IFT88-204ENST00000461115 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms