RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NBPF6Q5VWK0 638 aa18.07■□□□□ 0.48
RAB11FIP3-207ENST00000461009 PROM2Q8N271 834 aa18.07■□□□□ 0.48
RAB11FIP3-207ENST00000461009 NBPF4Q96M43 638 aa18.07■□□□□ 0.48
RAB11FIP3-207ENST00000461009 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
RAB11FIP3-207ENST00000461009 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
RAB11FIP3-207ENST00000461009 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
RAB11FIP3-207ENST00000461009 NSD2O96028 1365 aa18.05■□□□□ 0.48
RAB11FIP3-207ENST00000461009 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
RAB11FIP3-207ENST00000461009 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
RAB11FIP3-207ENST00000461009 USHBP1Q8N6Y0 703 aa18.03■□□□□ 0.48
RAB11FIP3-207ENST00000461009 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
RAB11FIP3-207ENST00000461009 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
RAB11FIP3-207ENST00000461009 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
RAB11FIP3-207ENST00000461009 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
RAB11FIP3-207ENST00000461009 MAP2P11137 1827 aaKnown RBP18.01■□□□□ 0.47
RAB11FIP3-207ENST00000461009 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
RAB11FIP3-207ENST00000461009 PER1O15534 1290 aaPredicted RBP18.01■□□□□ 0.47
RAB11FIP3-207ENST00000461009 PRIM1P49642 420 aaKnown RBP18.01■□□□□ 0.47
RAB11FIP3-207ENST00000461009 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
RAB11FIP3-207ENST00000461009 PCDH11XQ9BZA7 1347 aa18■□□□□ 0.47
RAB11FIP3-207ENST00000461009 PCDH11YQ9BZA8 1340 aa18■□□□□ 0.47
RAB11FIP3-207ENST00000461009 RGPD2P0DJD1 1756 aa18■□□□□ 0.47
RAB11FIP3-207ENST00000461009 MEGF6O75095 1541 aa18■□□□□ 0.47
RAB11FIP3-207ENST00000461009 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
RAB11FIP3-207ENST00000461009 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
RAB11FIP3-207ENST00000461009 BTAF1O14981 1849 aa17.99■□□□□ 0.47
RAB11FIP3-207ENST00000461009 ZBTB7AO95365 584 aa17.97■□□□□ 0.47
RAB11FIP3-207ENST00000461009 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
RAB11FIP3-207ENST00000461009 SPG7Q9UQ90 795 aa17.97■□□□□ 0.47
RAB11FIP3-207ENST00000461009 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
RAB11FIP3-207ENST00000461009 CC2D1BQ5T0F9 858 aaKnown RBP17.95■□□□□ 0.46
RAB11FIP3-207ENST00000461009 MTFR1LQ9H019 292 aa17.95■□□□□ 0.46
RAB11FIP3-207ENST00000461009 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
RAB11FIP3-207ENST00000461009 EYA1Q99502 592 aa17.93■□□□□ 0.46
RAB11FIP3-207ENST00000461009 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
RAB11FIP3-207ENST00000461009 CCNL1Q9UK58 526 aaPredicted RBP17.93■□□□□ 0.46
RAB11FIP3-207ENST00000461009 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
RAB11FIP3-207ENST00000461009 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
RAB11FIP3-207ENST00000461009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.461e-7■■□□□ 12.1
RAB11FIP3-207ENST00000461009 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
RAB11FIP3-207ENST00000461009 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
RAB11FIP3-207ENST00000461009 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
RAB11FIP3-207ENST00000461009 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
RAB11FIP3-207ENST00000461009 SHANK3Q9BYB0 1731 aa17.91■□□□□ 0.46
RAB11FIP3-207ENST00000461009 EIF4A2Q14240 407 aaKnown RBP17.9■□□□□ 0.46
RAB11FIP3-207ENST00000461009 SLC16A10Q8TF71 515 aa17.9■□□□□ 0.46
RAB11FIP3-207ENST00000461009 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
RAB11FIP3-207ENST00000461009 CYP27B1O15528 508 aa17.89■□□□□ 0.45
RAB11FIP3-207ENST00000461009 DDX10Q13206 875 aaKnown RBP17.89■□□□□ 0.45
RAB11FIP3-207ENST00000461009 ZNF827Q17R98 1081 aa17.89■□□□□ 0.45
RAB11FIP3-207ENST00000461009 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
RAB11FIP3-207ENST00000461009 PTGER2P43116 358 aa17.88■□□□□ 0.45
RAB11FIP3-207ENST00000461009 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
RAB11FIP3-207ENST00000461009 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
RAB11FIP3-207ENST00000461009 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
RAB11FIP3-207ENST00000461009 POLD1P28340 1107 aa17.87■□□□□ 0.45
RAB11FIP3-207ENST00000461009 NKX1-1Q15270 411 aaPredicted RBP17.87■□□□□ 0.45
RAB11FIP3-207ENST00000461009 MTHFSP49914 203 aa17.86■□□□□ 0.45
RAB11FIP3-207ENST00000461009 KCNQ4P56696 695 aa17.86■□□□□ 0.45
RAB11FIP3-207ENST00000461009 PLEKHG2Q9H7P9 1386 aa17.86■□□□□ 0.45
RAB11FIP3-207ENST00000461009 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
RAB11FIP3-207ENST00000461009 MSH5O43196 834 aa17.85■□□□□ 0.45
RAB11FIP3-207ENST00000461009 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
RAB11FIP3-207ENST00000461009 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
RAB11FIP3-207ENST00000461009 ARXQ96QS3 562 aa17.85■□□□□ 0.45
RAB11FIP3-207ENST00000461009 TMOD3Q9NYL9 352 aa17.85■□□□□ 0.45
RAB11FIP3-207ENST00000461009 LY75O60449 1722 aa17.84■□□□□ 0.45
RAB11FIP3-207ENST00000461009 PKD1L3Q7Z443 1732 aa17.84■□□□□ 0.45
RAB11FIP3-207ENST00000461009 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
RAB11FIP3-207ENST00000461009 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
RAB11FIP3-207ENST00000461009 IGSF1Q8N6C5 1336 aa17.83■□□□□ 0.44
RAB11FIP3-207ENST00000461009 PHKG2P15735 406 aa17.83■□□□□ 0.44
RAB11FIP3-207ENST00000461009 FLAD1Q8NFF5 587 aa17.83■□□□□ 0.44
RAB11FIP3-207ENST00000461009 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
RAB11FIP3-207ENST00000461009 PIGBQ92521 554 aa17.82■□□□□ 0.44
RAB11FIP3-207ENST00000461009 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
RAB11FIP3-207ENST00000461009 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
RAB11FIP3-207ENST00000461009 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
RAB11FIP3-207ENST00000461009 QSER1Q2KHR3 1735 aa17.81■□□□□ 0.44
RAB11FIP3-207ENST00000461009 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
RAB11FIP3-207ENST00000461009 AK7Q96M32 723 aa17.8■□□□□ 0.44
RAB11FIP3-207ENST00000461009 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
RAB11FIP3-207ENST00000461009 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
RAB11FIP3-207ENST00000461009 DCAF5Q96JK2 942 aa17.79■□□□□ 0.44
RAB11FIP3-207ENST00000461009 ITGB4P16144 1822 aa17.78■□□□□ 0.44
RAB11FIP3-207ENST00000461009 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
RAB11FIP3-207ENST00000461009 SULT6B1Q6IMI4 303 aa17.78■□□□□ 0.44
RAB11FIP3-207ENST00000461009 ZNF530Q6P9A1 599 aaPredicted RBP17.78■□□□□ 0.44
RAB11FIP3-207ENST00000461009 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 YY1P25490 414 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 IL13P35225 146 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 SIK1P57059 783 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 RALBP1Q15311 655 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 KLHL34Q8N239 644 aa17.77■□□□□ 0.44
RAB11FIP3-207ENST00000461009 CABP4P57796 275 aa17.76■□□□□ 0.43
RAB11FIP3-207ENST00000461009 COL23A1Q86Y22 540 aaPredicted RBP17.76■□□□□ 0.43
RAB11FIP3-207ENST00000461009 TOGARAM1Q9Y4F4 1720 aa17.75■□□□□ 0.43
RAB11FIP3-207ENST00000461009 C5P01031 1676 aa17.75■□□□□ 0.43
RAB11FIP3-207ENST00000461009 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms