RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 NLGN2Q8NFZ4 835 aa19.23■□□□□ 0.67
SCAMP4-206ENST00000460767 TFCP2L1Q9NZI6 479 aa19.22■□□□□ 0.67
SCAMP4-206ENST00000460767 KAT6BQ8WYB5 2073 aa19.21■□□□□ 0.67
SCAMP4-206ENST00000460767 ADCY9O60503 1353 aa19.21■□□□□ 0.67
SCAMP4-206ENST00000460767 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.676e-7■□□□□ 11.3
SCAMP4-206ENST00000460767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.21■□□□□ 0.67
SCAMP4-206ENST00000460767 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
SCAMP4-206ENST00000460767 KLHL34Q8N239 644 aa19.2■□□□□ 0.66
SCAMP4-206ENST00000460767 IP6K1Q92551 441 aa19.2■□□□□ 0.66
SCAMP4-206ENST00000460767 C5P01031 1676 aa19.2■□□□□ 0.66
SCAMP4-206ENST00000460767 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-206ENST00000460767 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-206ENST00000460767 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
SCAMP4-206ENST00000460767 A0A1W2PP64 1363 aa19.17■□□□□ 0.66
SCAMP4-206ENST00000460767 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
SCAMP4-206ENST00000460767 DDX54Q8TDD1 881 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-206ENST00000460767 TAF1LQ8IZX4 1826 aa19.16■□□□□ 0.66
SCAMP4-206ENST00000460767 MEGF6O75095 1541 aa19.15■□□□□ 0.66
SCAMP4-206ENST00000460767 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-206ENST00000460767 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
SCAMP4-206ENST00000460767 CD2APQ9Y5K6 639 aa19.15■□□□□ 0.66
SCAMP4-206ENST00000460767 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.66
SCAMP4-206ENST00000460767 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
SCAMP4-206ENST00000460767 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
SCAMP4-206ENST00000460767 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
SCAMP4-206ENST00000460767 CGNL1Q0VF96 1302 aa19.13■□□□□ 0.65
SCAMP4-206ENST00000460767 CICQ96RK0 1608 aaPredicted RBP19.12■□□□□ 0.65
SCAMP4-206ENST00000460767 KCNQ4P56696 695 aa19.12■□□□□ 0.65
SCAMP4-206ENST00000460767 SYTL4Q96C24 671 aaPredicted RBP19.12■□□□□ 0.65
SCAMP4-206ENST00000460767 HSPA6P17066 643 aa19.11■□□□□ 0.65
SCAMP4-206ENST00000460767 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
SCAMP4-206ENST00000460767 ZCRB1Q8TBF4 217 aaKnown RBP19.11■□□□□ 0.65
SCAMP4-206ENST00000460767 TOGARAM1Q9Y4F4 1720 aa19.11■□□□□ 0.65
SCAMP4-206ENST00000460767 MAP3K19Q56UN5 1328 aa19.1■□□□□ 0.65
SCAMP4-206ENST00000460767 HOXC9P31274 260 aa19.1■□□□□ 0.65
SCAMP4-206ENST00000460767 SLC12A5Q9H2X9 1139 aa19.1■□□□□ 0.65
SCAMP4-206ENST00000460767 GPBP1L1Q9HC44 474 aaPredicted RBP19.1■□□□□ 0.65
SCAMP4-206ENST00000460767 GOLGB1Q14789 3259 aaKnown RBP19.1■□□□□ 0.65
SCAMP4-206ENST00000460767 C4BP0C0L5 1744 aa19.08■□□□□ 0.65
SCAMP4-206ENST00000460767 TMC1Q8TDI8 760 aa19.08■□□□□ 0.64
SCAMP4-206ENST00000460767 UBR3Q6ZT12 1888 aa19.07■□□□□ 0.64
SCAMP4-206ENST00000460767 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
SCAMP4-206ENST00000460767 CEP350Q5VT06 3117 aa19.07■□□□□ 0.64
SCAMP4-206ENST00000460767 TMF1P82094 1093 aa19.06■□□□□ 0.64
SCAMP4-206ENST00000460767 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
SCAMP4-206ENST00000460767 MSL1Q68DK7 614 aa19.04■□□□□ 0.64
SCAMP4-206ENST00000460767 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
SCAMP4-206ENST00000460767 COG3Q96JB2 828 aa19.04■□□□□ 0.64
SCAMP4-206ENST00000460767 PALLDQ8WX93 1383 aa19.04■□□□□ 0.64
SCAMP4-206ENST00000460767 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
SCAMP4-206ENST00000460767 ITGB4P16144 1822 aa19.03■□□□□ 0.64
SCAMP4-206ENST00000460767 MSH5O43196 834 aa19.03■□□□□ 0.64
SCAMP4-206ENST00000460767 EIF4G2P78344 907 aaKnown RBP eCLIP19.03■□□□□ 0.64
SCAMP4-206ENST00000460767 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
SCAMP4-206ENST00000460767 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
SCAMP4-206ENST00000460767 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-206ENST00000460767 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-206ENST00000460767 AMPHP49418 695 aa19.02■□□□□ 0.64
SCAMP4-206ENST00000460767 KIF24Q5T7B8 1368 aa19.02■□□□□ 0.64
SCAMP4-206ENST00000460767 KIF13BQ9NQT8 1826 aa19.02■□□□□ 0.63
SCAMP4-206ENST00000460767 CDCA8Q53HL2 280 aa19■□□□□ 0.63
SCAMP4-206ENST00000460767 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
SCAMP4-206ENST00000460767 NBPF4Q96M43 638 aa19■□□□□ 0.63
SCAMP4-206ENST00000460767 NCAPD2Q15021 1401 aa19■□□□□ 0.63
SCAMP4-206ENST00000460767 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
SCAMP4-206ENST00000460767 KIF3CO14782 793 aa18.99■□□□□ 0.63
SCAMP4-206ENST00000460767 RAPGEF4Q8WZA2 1011 aa18.99■□□□□ 0.63
SCAMP4-206ENST00000460767 KIAA1551Q9HCM1 1747 aa18.99■□□□□ 0.63
SCAMP4-206ENST00000460767 INSRP06213 1382 aa18.98■□□□□ 0.63
SCAMP4-206ENST00000460767 SMARCC1Q92922 1105 aaPredicted RBP18.98■□□□□ 0.63
SCAMP4-206ENST00000460767 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
SCAMP4-206ENST00000460767 SSFA2P28290 1259 aa18.96■□□□□ 0.63
SCAMP4-206ENST00000460767 KIF20BQ96Q89 1820 aa18.95■□□□□ 0.62
SCAMP4-206ENST00000460767 AK7Q96M32 723 aa18.95■□□□□ 0.62
SCAMP4-206ENST00000460767 FLT4P35916 1363 aa18.94■□□□□ 0.62
SCAMP4-206ENST00000460767 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
SCAMP4-206ENST00000460767 APLP1P51693 650 aa18.94■□□□□ 0.62
SCAMP4-206ENST00000460767 ZNF831Q5JPB2 1677 aa18.94■□□□□ 0.62
SCAMP4-206ENST00000460767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-206ENST00000460767 CYP27B1O15528 508 aa18.93■□□□□ 0.62
SCAMP4-206ENST00000460767 FBLN1P23142 703 aa18.93■□□□□ 0.62
SCAMP4-206ENST00000460767 AMIGO3Q86WK7 504 aa18.93■□□□□ 0.62
SCAMP4-206ENST00000460767 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
SCAMP4-206ENST00000460767 CARD14Q9BXL6 1004 aa18.93■□□□□ 0.62
SCAMP4-206ENST00000460767 PXDNLA1KZ92 1463 aa18.92■□□□□ 0.62
SCAMP4-206ENST00000460767 RRS1Q15050 365 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-206ENST00000460767 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-206ENST00000460767 USHBP1Q8N6Y0 703 aa18.92■□□□□ 0.62
SCAMP4-206ENST00000460767 BRCA1P38398 1863 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-206ENST00000460767 FYB1O15117 783 aa18.91■□□□□ 0.62
SCAMP4-206ENST00000460767 MPRIPQ6WCQ1 1025 aa18.91■□□□□ 0.62
SCAMP4-206ENST00000460767 WDR90Q96KV7 1748 aa18.9■□□□□ 0.62
SCAMP4-206ENST00000460767 PLEKHG2Q9H7P9 1386 aa18.9■□□□□ 0.62
SCAMP4-206ENST00000460767 TOMM70O94826 608 aa18.89■□□□□ 0.61
SCAMP4-206ENST00000460767 C10orf71Q711Q0 1435 aa18.89■□□□□ 0.61
SCAMP4-206ENST00000460767 DNAJC5GQ8N7S2 189 aa18.88■□□□□ 0.61
SCAMP4-206ENST00000460767 PIGBQ92521 554 aa18.88■□□□□ 0.61
SCAMP4-206ENST00000460767 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
SCAMP4-206ENST00000460767 PHF14O94880 888 aa18.87■□□□□ 0.61
SCAMP4-206ENST00000460767 SIK1P57059 783 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1045.3 ms