RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 AAMPQ13685 434 aa21.79■■□□□ 1.08
YIPF3-205ENST00000460547 CENPQQ7L2Z9 268 aaPredicted RBP21.79■■□□□ 1.08
YIPF3-205ENST00000460547 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.78■■□□□ 1.08
YIPF3-205ENST00000460547 NWD2Q9ULI1 1742 aa21.78■■□□□ 1.08
YIPF3-205ENST00000460547 CPDO75976 1380 aa21.78■■□□□ 1.08
YIPF3-205ENST00000460547 PHRF1Q9P1Y6 1649 aaKnown RBP21.78■■□□□ 1.08
YIPF3-205ENST00000460547 PLCH1Q4KWH8 1693 aa21.78■■□□□ 1.08
YIPF3-205ENST00000460547 SOX12O15370 315 aa21.78■■□□□ 1.08
YIPF3-205ENST00000460547 MS4A1P11836 297 aa21.76■■□□□ 1.07
YIPF3-205ENST00000460547 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
YIPF3-205ENST00000460547 A0A0G2JS52 829 aa21.75■■□□□ 1.07
YIPF3-205ENST00000460547 HMOX1P09601 288 aa21.75■■□□□ 1.07
YIPF3-205ENST00000460547 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
YIPF3-205ENST00000460547 MYT1Q01538 1121 aa21.75■■□□□ 1.07
YIPF3-205ENST00000460547 TSR2Q969E8 191 aaKnown RBP21.75■■□□□ 1.07
YIPF3-205ENST00000460547 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
YIPF3-205ENST00000460547 LMOD3Q0VAK6 560 aa21.74■■□□□ 1.07
YIPF3-205ENST00000460547 EIF4A2Q14240 407 aaKnown RBP21.74■■□□□ 1.07
YIPF3-205ENST00000460547 SEPT12Q8IYM1 358 aa21.74■■□□□ 1.07
YIPF3-205ENST00000460547 KIF24Q5T7B8 1368 aa21.73■■□□□ 1.07
YIPF3-205ENST00000460547 ONECUT3O60422 494 aaPredicted RBP21.73■■□□□ 1.07
YIPF3-205ENST00000460547 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
YIPF3-205ENST00000460547 SPATA31A5Q5VU36 1347 aa21.73■■□□□ 1.07
YIPF3-205ENST00000460547 SPATA31A7Q8IWB4 1347 aa21.73■■□□□ 1.07
YIPF3-205ENST00000460547 FAM98CQ17RN3 349 aaKnown RBP21.72■■□□□ 1.07
YIPF3-205ENST00000460547 UPF1Q92900 1129 aaKnown RBP eCLIP21.72■■□□□ 1.07
YIPF3-205ENST00000460547 GLI3P10071 1580 aa21.72■■□□□ 1.07
YIPF3-205ENST00000460547 SLIT3O75094 1523 aa21.72■■□□□ 1.07
YIPF3-205ENST00000460547 FLT4P35916 1363 aa21.72■■□□□ 1.07
YIPF3-205ENST00000460547 ARHGEF25Q86VW2 580 aa21.71■■□□□ 1.07
YIPF3-205ENST00000460547 ZNF428Q96B54 188 aa21.71■■□□□ 1.07
YIPF3-205ENST00000460547 USP35Q9P2H5 1018 aa21.71■■□□□ 1.07
YIPF3-205ENST00000460547 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
YIPF3-205ENST00000460547 PANK1Q8TE04 598 aa21.69■■□□□ 1.06
YIPF3-205ENST00000460547 FRAT1Q92837 279 aaPredicted RBP21.69■■□□□ 1.06
YIPF3-205ENST00000460547 IFT57Q9NWB7 429 aa21.69■■□□□ 1.06
YIPF3-205ENST00000460547 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
YIPF3-205ENST00000460547 LARP1Q6PKG0 1096 aaKnown RBP21.69■■□□□ 1.06
YIPF3-205ENST00000460547 CLUAP1Q96AJ1 413 aa21.69■■□□□ 1.06
YIPF3-205ENST00000460547 NRAPQ86VF7 1730 aa21.68■■□□□ 1.06
YIPF3-205ENST00000460547 CAMTA1Q9Y6Y1 1673 aa21.68■■□□□ 1.06
YIPF3-205ENST00000460547 DLG5Q8TDM6 1919 aa21.68■■□□□ 1.06
YIPF3-205ENST00000460547 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
YIPF3-205ENST00000460547 GNAI1P63096 354 aa21.67■■□□□ 1.06
YIPF3-205ENST00000460547 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
YIPF3-205ENST00000460547 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
YIPF3-205ENST00000460547 COG6Q9Y2V7 657 aa21.67■■□□□ 1.06
YIPF3-205ENST00000460547 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
YIPF3-205ENST00000460547 HSP90AB2PQ58FF8 381 aa21.66■■□□□ 1.06
YIPF3-205ENST00000460547 KRT27Q7Z3Y8 459 aa21.66■■□□□ 1.06
YIPF3-205ENST00000460547 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
YIPF3-205ENST00000460547 AXIN2Q9Y2T1 843 aa21.66■■□□□ 1.06
YIPF3-205ENST00000460547 KDRP35968 1356 aa21.66■■□□□ 1.06
YIPF3-205ENST00000460547 RLBP1P12271 317 aa21.65■■□□□ 1.06
YIPF3-205ENST00000460547 BRPF1P55201 1214 aaPredicted RBP21.65■■□□□ 1.06
YIPF3-205ENST00000460547 SSH1Q8WYL5 1049 aa21.65■■□□□ 1.06
YIPF3-205ENST00000460547 KIF16BQ96L93 1317 aa21.64■■□□□ 1.06
YIPF3-205ENST00000460547 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.05
YIPF3-205ENST00000460547 SULT6B1Q6IMI4 303 aa21.64■■□□□ 1.05
YIPF3-205ENST00000460547 TOM1L2Q6ZVM7 507 aa21.64■■□□□ 1.05
YIPF3-205ENST00000460547 AEBP1Q8IUX7 1158 aa21.63■■□□□ 1.05
YIPF3-205ENST00000460547 COL5A2P05997 1499 aaPredicted RBP21.63■■□□□ 1.05
YIPF3-205ENST00000460547 RTL1A6NKG5 1358 aa21.63■■□□□ 1.05
YIPF3-205ENST00000460547 THRAP3Q9Y2W1 955 aaKnown RBP21.63■■□□□ 1.05
YIPF3-205ENST00000460547 LMO7Q8WWI1 1683 aa21.62■■□□□ 1.05
YIPF3-205ENST00000460547 MVPQ14764 893 aaKnown RBP21.62■■□□□ 1.05
YIPF3-205ENST00000460547 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
YIPF3-205ENST00000460547 DZIP1LQ8IYY4 767 aaKnown RBP21.62■■□□□ 1.05
YIPF3-205ENST00000460547 CFAP44Q96MT7 982 aa21.62■■□□□ 1.05
YIPF3-205ENST00000460547 IGSF1Q8N6C5 1336 aa21.61■■□□□ 1.05
YIPF3-205ENST00000460547 CRB1P82279 1406 aa21.6■■□□□ 1.05
YIPF3-205ENST00000460547 ATF7IPQ6VMQ6 1270 aa21.6■■□□□ 1.05
YIPF3-205ENST00000460547 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
YIPF3-205ENST00000460547 WDR17Q8IZU2 1322 aa21.6■■□□□ 1.05
YIPF3-205ENST00000460547 NFAT5O94916 1531 aa21.6■■□□□ 1.05
YIPF3-205ENST00000460547 THUMPD2Q9BTF0 503 aaKnown RBP21.6■■□□□ 1.05
YIPF3-205ENST00000460547 TRIM27P14373 513 aa21.59■■□□□ 1.05
YIPF3-205ENST00000460547 CCDC125Q86Z20 511 aa21.59■■□□□ 1.05
YIPF3-205ENST00000460547 FTSJ3Q8IY81 847 aaKnown RBP21.59■■□□□ 1.05
YIPF3-205ENST00000460547 BACH2Q9BYV9 841 aa21.59■■□□□ 1.05
YIPF3-205ENST00000460547 IPO8O15397 1037 aaKnown RBP21.58■■□□□ 1.05
YIPF3-205ENST00000460547 PDE4AP27815 886 aa21.58■■□□□ 1.05
YIPF3-205ENST00000460547 AMPHP49418 695 aa21.58■■□□□ 1.05
YIPF3-205ENST00000460547 MBIPQ9NS73 344 aa21.58■■□□□ 1.05
YIPF3-205ENST00000460547 VAMP4O75379 141 aa21.56■■□□□ 1.04
YIPF3-205ENST00000460547 IGHDP01880 384 aa21.56■■□□□ 1.04
YIPF3-205ENST00000460547 HOXC9P31274 260 aa21.56■■□□□ 1.04
YIPF3-205ENST00000460547 IP6K1Q92551 441 aa21.55■■□□□ 1.04
YIPF3-205ENST00000460547 NOB1Q9ULX3 412 aaKnown RBP21.55■■□□□ 1.04
YIPF3-205ENST00000460547 LAS1LQ9Y4W2 734 aaKnown RBP21.55■■□□□ 1.04
YIPF3-205ENST00000460547 COL18A1P39060 1754 aa21.54■■□□□ 1.04
YIPF3-205ENST00000460547 SF3B2Q13435 895 aaKnown RBP21.54■■□□□ 1.04
YIPF3-205ENST00000460547 CARD10Q9BWT7 1032 aa21.54■■□□□ 1.04
YIPF3-205ENST00000460547 DDX19BQ9UMR2 479 aa21.54■■□□□ 1.04
YIPF3-205ENST00000460547 FAM182BQ5T319 152 aa21.53■■□□□ 1.04
YIPF3-205ENST00000460547 ANKRD24Q8TF21 1146 aa21.53■■□□□ 1.04
YIPF3-205ENST00000460547 ARHGAP45Q92619 1136 aa21.53■■□□□ 1.04
YIPF3-205ENST00000460547 EYA1Q99502 592 aa21.53■■□□□ 1.04
YIPF3-205ENST00000460547 NLRP2Q9NX02 1062 aa21.53■■□□□ 1.04
YIPF3-205ENST00000460547 ABCC6O95255 1503 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms