RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 ADAMTS7Q9UKP4 1686 aa10.04□□□□□ -0.8
THUMPD2-203ENST00000460072 PTF1AQ7RTS3 328 aa10.04□□□□□ -0.8
THUMPD2-203ENST00000460072 VIRMAQ69YN4 1812 aaKnown RBP10.04□□□□□ -0.8
THUMPD2-203ENST00000460072 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
THUMPD2-203ENST00000460072 ANKRD24Q8TF21 1146 aa10.03□□□□□ -0.8
THUMPD2-203ENST00000460072 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
THUMPD2-203ENST00000460072 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
THUMPD2-203ENST00000460072 ZNF827Q17R98 1081 aa10.02□□□□□ -0.8
THUMPD2-203ENST00000460072 SMG6Q86US8 1419 aaKnown RBP10.02□□□□□ -0.8
THUMPD2-203ENST00000460072 TNRC6CQ9HCJ0 1690 aaKnown RBP10.02□□□□□ -0.81
THUMPD2-203ENST00000460072 INSRP06213 1382 aa10.02□□□□□ -0.81
THUMPD2-203ENST00000460072 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
THUMPD2-203ENST00000460072 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.81
THUMPD2-203ENST00000460072 C10orf71Q711Q0 1435 aa10.01□□□□□ -0.81
THUMPD2-203ENST00000460072 FLAD1Q8NFF5 587 aa10.01□□□□□ -0.81
THUMPD2-203ENST00000460072 TJP1Q07157 1748 aa10.01□□□□□ -0.81
THUMPD2-203ENST00000460072 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 SCN11AQ9UI33 1791 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 CSB-PGBD3P0DP91 1061 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 C1QTNF8P60827 252 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 TESK2Q96S53 571 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 MAP3K19Q56UN5 1328 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 TONSLQ96HA7 1378 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 ZBTB7AO95365 584 aa10□□□□□ -0.81
THUMPD2-203ENST00000460072 NME9Q86XW9 330 aa9.99□□□□□ -0.81
THUMPD2-203ENST00000460072 POLD1P28340 1107 aa9.99□□□□□ -0.81
THUMPD2-203ENST00000460072 HOXC9P31274 260 aa9.99□□□□□ -0.81
THUMPD2-203ENST00000460072 PDGFDQ9GZP0 370 aaPredicted RBP9.99□□□□□ -0.81
THUMPD2-203ENST00000460072 CD2APQ9Y5K6 639 aa9.99□□□□□ -0.81
THUMPD2-203ENST00000460072 ARFGEF2Q9Y6D5 1785 aa9.99□□□□□ -0.81
THUMPD2-203ENST00000460072 FLT4P35916 1363 aa9.98□□□□□ -0.81
THUMPD2-203ENST00000460072 GRIN3BO60391 1043 aa9.98□□□□□ -0.81
THUMPD2-203ENST00000460072 WDR90Q96KV7 1748 aa9.98□□□□□ -0.81
THUMPD2-203ENST00000460072 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
THUMPD2-203ENST00000460072 UBR2Q8IWV8 1755 aa9.97□□□□□ -0.81
THUMPD2-203ENST00000460072 PCDH11XQ9BZA7 1347 aa9.97□□□□□ -0.81
THUMPD2-203ENST00000460072 PCDH11YQ9BZA8 1340 aa9.97□□□□□ -0.81
THUMPD2-203ENST00000460072 KDRP35968 1356 aa9.97□□□□□ -0.81
THUMPD2-203ENST00000460072 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
THUMPD2-203ENST00000460072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.822e-7■■□□□ 14.5
THUMPD2-203ENST00000460072 ATF5Q9Y2D1 282 aaPredicted RBP9.96□□□□□ -0.82
THUMPD2-203ENST00000460072 MRC1P22897 1456 aa9.95□□□□□ -0.82
THUMPD2-203ENST00000460072 ZCRB1Q8TBF4 217 aaKnown RBP9.95□□□□□ -0.82
THUMPD2-203ENST00000460072 USP47Q96K76 1375 aa9.95□□□□□ -0.82
THUMPD2-203ENST00000460072 SMARCC1Q92922 1105 aaPredicted RBP9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 COG3Q96JB2 828 aa9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 CARD11Q9BXL7 1154 aa9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 SIPA1L3O60292 1781 aaPredicted RBP9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 N4BP2Q86UW6 1770 aaPredicted RBP9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 ATP10DQ9P241 1426 aa9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 SBF1O95248 1867 aa9.94□□□□□ -0.82
THUMPD2-203ENST00000460072 PALLDQ8WX93 1383 aa9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 DICER1Q9UPY3 1922 aaKnown RBP9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 KAT6BQ8WYB5 2073 aa9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 ACSBG1Q96GR2 724 aa9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 SLC12A5Q9H2X9 1139 aa9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 SCN7AQ01118 1682 aa9.92□□□□□ -0.82
THUMPD2-203ENST00000460072 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 SSFA2P28290 1259 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 TIAM2Q8IVF5 1701 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 TIMELESSQ9UNS1 1208 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 PXDNLA1KZ92 1463 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 SIN3AQ96ST3 1273 aa9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 CCNL1Q9UK58 526 aaPredicted RBP9.91□□□□□ -0.82
THUMPD2-203ENST00000460072 IFFO2Q5TF58 517 aa9.9□□□□□ -0.82
THUMPD2-203ENST00000460072 COL23A1Q86Y22 540 aaPredicted RBP9.9□□□□□ -0.82
THUMPD2-203ENST00000460072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.9□□□□□ -0.82
THUMPD2-203ENST00000460072 BCORQ6W2J9 1755 aa9.9□□□□□ -0.82
THUMPD2-203ENST00000460072 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
THUMPD2-203ENST00000460072 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
THUMPD2-203ENST00000460072 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
THUMPD2-203ENST00000460072 FYB1O15117 783 aa9.89□□□□□ -0.83
THUMPD2-203ENST00000460072 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
THUMPD2-203ENST00000460072 WASHC2AQ641Q2 1341 aa9.89□□□□□ -0.83
THUMPD2-203ENST00000460072 MYH14Q7Z406 1995 aaKnown RBP9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 TFCP2L1Q9NZI6 479 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 CNTNAP4Q9C0A0 1308 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 ADRA2BP18089 450 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 GPR162Q16538 588 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 NBPF6Q5VWK0 638 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 NBPF4Q96M43 638 aa9.88□□□□□ -0.83
THUMPD2-203ENST00000460072 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 TMF1P82094 1093 aa9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 NLGN2Q8NFZ4 835 aa9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 AMPHP49418 695 aa9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 RAPGEF4Q8WZA2 1011 aa9.87□□□□□ -0.83
THUMPD2-203ENST00000460072 KCNA4P22459 653 aa9.86□□□□□ -0.83
THUMPD2-203ENST00000460072 ZC3H4Q9UPT8 1303 aaKnown RBP9.85□□□□□ -0.83
THUMPD2-203ENST00000460072 CYP27B1O15528 508 aa9.85□□□□□ -0.83
THUMPD2-203ENST00000460072 TMC1Q8TDI8 760 aa9.85□□□□□ -0.83
THUMPD2-203ENST00000460072 TGFB2P61812 414 aa9.85□□□□□ -0.83
THUMPD2-203ENST00000460072 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
THUMPD2-203ENST00000460072 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
THUMPD2-203ENST00000460072 HSPA6P17066 643 aa9.84□□□□□ -0.83
THUMPD2-203ENST00000460072 DDX54Q8TDD1 881 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms