RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
CCDC12-204ENST00000460035 TATP17735 454 aaPredicted RBP14.58□□□□□ -0.08
CCDC12-204ENST00000460035 ANP32CO43423 234 aa14.57□□□□□ -0.08
CCDC12-204ENST00000460035 FAM182BQ5T319 152 aa14.57□□□□□ -0.08
CCDC12-204ENST00000460035 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
CCDC12-204ENST00000460035 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
CCDC12-204ENST00000460035 ITGB4P16144 1822 aa14.57□□□□□ -0.08
CCDC12-204ENST00000460035 SULT6B1Q6IMI4 303 aa14.56□□□□□ -0.08
CCDC12-204ENST00000460035 ZCRB1Q8TBF4 217 aaKnown RBP14.56□□□□□ -0.08
CCDC12-204ENST00000460035 DOT1LQ8TEK3 1739 aa14.55□□□□□ -0.08
CCDC12-204ENST00000460035 DLG5Q8TDM6 1919 aa14.55□□□□□ -0.08
CCDC12-204ENST00000460035 DDX54Q8TDD1 881 aaKnown RBP14.55□□□□□ -0.08
CCDC12-204ENST00000460035 EP400Q96L91 3159 aa14.55□□□□□ -0.08
CCDC12-204ENST00000460035 BCL9O00512 1426 aa14.55□□□□□ -0.08
CCDC12-204ENST00000460035 NHSQ6T4R5 1651 aa14.55□□□□□ -0.08
CCDC12-204ENST00000460035 HMOX1P09601 288 aa14.54□□□□□ -0.08
CCDC12-204ENST00000460035 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
CCDC12-204ENST00000460035 SCN11AQ9UI33 1791 aa14.54□□□□□ -0.08
CCDC12-204ENST00000460035 MARCH10Q8NA82 808 aaPredicted RBP14.53□□□□□ -0.08
CCDC12-204ENST00000460035 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.08
CCDC12-204ENST00000460035 U2AF1L5P0DN76 240 aaPredicted RBP14.52□□□□□ -0.09
CCDC12-204ENST00000460035 U2AF1Q01081 240 aaKnown RBP eCLIP14.52□□□□□ -0.09
CCDC12-204ENST00000460035 FAM196AQ6ZSG2 479 aa14.52□□□□□ -0.09
CCDC12-204ENST00000460035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.09
CCDC12-204ENST00000460035 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
CCDC12-204ENST00000460035 BTAF1O14981 1849 aa14.52□□□□□ -0.09
CCDC12-204ENST00000460035 RGPD3A6NKT7 1758 aaPredicted RBP14.51□□□□□ -0.09
CCDC12-204ENST00000460035 RGPD4Q7Z3J3 1758 aa14.51□□□□□ -0.09
CCDC12-204ENST00000460035 PCDH11XQ9BZA7 1347 aa14.5□□□□□ -0.09
CCDC12-204ENST00000460035 PCDH11YQ9BZA8 1340 aa14.5□□□□□ -0.09
CCDC12-204ENST00000460035 SOCS7O14512 581 aa14.5□□□□□ -0.09
CCDC12-204ENST00000460035 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
CCDC12-204ENST00000460035 ADAMTS7Q9UKP4 1686 aa14.49□□□□□ -0.09
CCDC12-204ENST00000460035 TRIM37O94972 964 aa14.48□□□□□ -0.09
CCDC12-204ENST00000460035 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
CCDC12-204ENST00000460035 UPF1Q92900 1129 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC12-204ENST00000460035 SF3B2Q13435 895 aaKnown RBP14.47□□□□□ -0.09
CCDC12-204ENST00000460035 RSPH6AQ9H0K4 717 aa14.47□□□□□ -0.09
CCDC12-204ENST00000460035 CYP27B1O15528 508 aa14.46□□□□□ -0.09
CCDC12-204ENST00000460035 FCHSD2O94868 740 aa14.46□□□□□ -0.09
CCDC12-204ENST00000460035 PRKAR2BP31323 418 aa14.46□□□□□ -0.09
CCDC12-204ENST00000460035 WDR43Q15061 677 aaKnown RBP eCLIP14.46□□□□□ -0.09
CCDC12-204ENST00000460035 DIEXFQ68CQ4 756 aaKnown RBP14.46□□□□□ -0.09
CCDC12-204ENST00000460035 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
CCDC12-204ENST00000460035 IFNL2Q8IZJ0 200 aa14.46□□□□□ -0.09
CCDC12-204ENST00000460035 ACSBG1Q96GR2 724 aa14.46□□□□□ -0.09
CCDC12-204ENST00000460035 SIPA1L3O60292 1781 aaPredicted RBP14.46□□□□□ -0.09
CCDC12-204ENST00000460035 CCDC125Q86Z20 511 aa14.45□□□□□ -0.1
CCDC12-204ENST00000460035 LY75O60449 1722 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 NEFMP07197 916 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 PHKG2P15735 406 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 NKX1-1Q15270 411 aaPredicted RBP14.44□□□□□ -0.1
CCDC12-204ENST00000460035 CCDC184Q52MB2 194 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
CCDC12-204ENST00000460035 MRS2Q9HD23 443 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 RREB1Q92766 1687 aa14.44□□□□□ -0.1
CCDC12-204ENST00000460035 KCNQ2O43526 872 aa14.43□□□□□ -0.1
CCDC12-204ENST00000460035 MTHFSDQ2M296 383 aaKnown RBP14.43□□□□□ -0.1
CCDC12-204ENST00000460035 PNNQ9H307 717 aaKnown RBP14.43□□□□□ -0.1
CCDC12-204ENST00000460035 APBA3O96018 575 aa14.42□□□□□ -0.1
CCDC12-204ENST00000460035 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
CCDC12-204ENST00000460035 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
CCDC12-204ENST00000460035 BCL11BQ9C0K0 894 aaPredicted RBP14.42□□□□□ -0.1
CCDC12-204ENST00000460035 HSP90AB1P08238 724 aaKnown RBP14.41□□□□□ -0.1
CCDC12-204ENST00000460035 PTF1AQ7RTS3 328 aa14.41□□□□□ -0.1
CCDC12-204ENST00000460035 GAS2L2Q8NHY3 880 aa14.41□□□□□ -0.1
CCDC12-204ENST00000460035 ADAMTS8Q9UP79 889 aa14.41□□□□□ -0.1
CCDC12-204ENST00000460035 TAF1LQ8IZX4 1826 aa14.41□□□□□ -0.1
CCDC12-204ENST00000460035 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
CCDC12-204ENST00000460035 MRC1P22897 1456 aa14.4□□□□□ -0.1
CCDC12-204ENST00000460035 AKAP4Q5JQC9 854 aa14.4□□□□□ -0.1
CCDC12-204ENST00000460035 MPRIPQ6WCQ1 1025 aa14.4□□□□□ -0.1
CCDC12-204ENST00000460035 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
CCDC12-204ENST00000460035 NUP188Q5SRE5 1749 aa14.4□□□□□ -0.1
CCDC12-204ENST00000460035 BAG6P46379 1132 aa14.39□□□□□ -0.11
CCDC12-204ENST00000460035 DEFB132Q7Z7B7 95 aa14.39□□□□□ -0.11
CCDC12-204ENST00000460035 CCDC146Q8IYE0 955 aa14.39□□□□□ -0.11
CCDC12-204ENST00000460035 DCAF5Q96JK2 942 aa14.39□□□□□ -0.11
CCDC12-204ENST00000460035 PAPPAQ13219 1627 aa14.39□□□□□ -0.11
CCDC12-204ENST00000460035 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
CCDC12-204ENST00000460035 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
CCDC12-204ENST00000460035 EN1Q05925 392 aaPredicted RBP14.38□□□□□ -0.11
CCDC12-204ENST00000460035 UBR2Q8IWV8 1755 aa14.37□□□□□ -0.11
CCDC12-204ENST00000460035 ZNF831Q5JPB2 1677 aa14.37□□□□□ -0.11
CCDC12-204ENST00000460035 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
CCDC12-204ENST00000460035 CABP4P57796 275 aa14.37□□□□□ -0.11
CCDC12-204ENST00000460035 PNISRQ8TF01 805 aaKnown RBP14.37□□□□□ -0.11
CCDC12-204ENST00000460035 ERVV-2B6SEH9 535 aa14.36□□□□□ -0.11
CCDC12-204ENST00000460035 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
CCDC12-204ENST00000460035 TMOD3Q9NYL9 352 aa14.36□□□□□ -0.11
CCDC12-204ENST00000460035 CCER2I3L3R5 266 aa14.35□□□□□ -0.11
CCDC12-204ENST00000460035 RNMTO43148 476 aaKnown RBP14.35□□□□□ -0.11
CCDC12-204ENST00000460035 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
CCDC12-204ENST00000460035 MIER1Q8N108 512 aa14.35□□□□□ -0.11
CCDC12-204ENST00000460035 PIGBQ92521 554 aa14.35□□□□□ -0.11
CCDC12-204ENST00000460035 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
CCDC12-204ENST00000460035 RUNDC1Q96C34 613 aa14.35□□□□□ -0.11
CCDC12-204ENST00000460035 CICQ96RK0 1608 aaPredicted RBP14.34□□□□□ -0.11
CCDC12-204ENST00000460035 PLSCR1O15162 318 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms