RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 PRIM1P49642 420 aaKnown RBP19.02■□□□□ 0.64
EPCAM-204ENST00000456133 IP6K1Q92551 441 aa19.02■□□□□ 0.64
EPCAM-204ENST00000456133 CEP350Q5VT06 3117 aa19.01■□□□□ 0.63
EPCAM-204ENST00000456133 ANKRD36BQ8N2N9 1353 aa19■□□□□ 0.63
EPCAM-204ENST00000456133 NSD2O96028 1365 aa18.99■□□□□ 0.63
EPCAM-204ENST00000456133 YBX3P16989 372 aaKnown RBP eCLIP18.99■□□□□ 0.632e-6■■□□□ 11.4
EPCAM-204ENST00000456133 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
EPCAM-204ENST00000456133 MSH5O43196 834 aa18.98■□□□□ 0.63
EPCAM-204ENST00000456133 IFFO2Q5TF58 517 aa18.98■□□□□ 0.63
EPCAM-204ENST00000456133 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
EPCAM-204ENST00000456133 GRIN3BO60391 1043 aa18.96■□□□□ 0.63
EPCAM-204ENST00000456133 COL23A1Q86Y22 540 aaPredicted RBP18.96■□□□□ 0.63
EPCAM-204ENST00000456133 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
EPCAM-204ENST00000456133 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
EPCAM-204ENST00000456133 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
EPCAM-204ENST00000456133 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
EPCAM-204ENST00000456133 C5P01031 1676 aa18.95■□□□□ 0.62
EPCAM-204ENST00000456133 MEGF6O75095 1541 aa18.94■□□□□ 0.62
EPCAM-204ENST00000456133 MAP3K19Q56UN5 1328 aa18.94■□□□□ 0.62
EPCAM-204ENST00000456133 HOXC9P31274 260 aa18.94■□□□□ 0.62
EPCAM-204ENST00000456133 MSL1Q68DK7 614 aa18.94■□□□□ 0.62
EPCAM-204ENST00000456133 FBLN1P23142 703 aa18.93■□□□□ 0.62
EPCAM-204ENST00000456133 AMPHP49418 695 aa18.92■□□□□ 0.62
EPCAM-204ENST00000456133 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
EPCAM-204ENST00000456133 USP47Q96K76 1375 aa18.92■□□□□ 0.62
EPCAM-204ENST00000456133 COG3Q96JB2 828 aa18.91■□□□□ 0.62
EPCAM-204ENST00000456133 ITGB4P16144 1822 aa18.89■□□□□ 0.61
EPCAM-204ENST00000456133 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
EPCAM-204ENST00000456133 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
EPCAM-204ENST00000456133 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
EPCAM-204ENST00000456133 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
EPCAM-204ENST00000456133 CD2APQ9Y5K6 639 aa18.87■□□□□ 0.61
EPCAM-204ENST00000456133 GPBP1L1Q9HC44 474 aaPredicted RBP18.85■□□□□ 0.61
EPCAM-204ENST00000456133 UBR3Q6ZT12 1888 aa18.85■□□□□ 0.61
EPCAM-204ENST00000456133 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
EPCAM-204ENST00000456133 RTL1A6NKG5 1358 aa18.85■□□□□ 0.61
EPCAM-204ENST00000456133 RAPGEF4Q8WZA2 1011 aa18.84■□□□□ 0.61
EPCAM-204ENST00000456133 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
EPCAM-204ENST00000456133 RRS1Q15050 365 aaKnown RBP18.84■□□□□ 0.61
EPCAM-204ENST00000456133 FLAD1Q8NFF5 587 aa18.84■□□□□ 0.61
EPCAM-204ENST00000456133 ZNF526Q8TF50 670 aaPredicted RBP18.84■□□□□ 0.61
EPCAM-204ENST00000456133 CGNL1Q0VF96 1302 aa18.83■□□□□ 0.61
EPCAM-204ENST00000456133 ADCY9O60503 1353 aa18.83■□□□□ 0.61
EPCAM-204ENST00000456133 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
EPCAM-204ENST00000456133 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
EPCAM-204ENST00000456133 MPRIPQ6WCQ1 1025 aa18.81■□□□□ 0.6
EPCAM-204ENST00000456133 TESK2Q96S53 571 aa18.81■□□□□ 0.6
EPCAM-204ENST00000456133 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
EPCAM-204ENST00000456133 HSPA6P17066 643 aa18.8■□□□□ 0.6
EPCAM-204ENST00000456133 WWC3Q9ULE0 1092 aa18.8■□□□□ 0.6
EPCAM-204ENST00000456133 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
EPCAM-204ENST00000456133 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 HMGB2P26583 209 aaKnown RBP18.79■□□□□ 0.6
EPCAM-204ENST00000456133 SMIM5Q71RC9 77 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 AK7Q96M32 723 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 GGNBP2Q9H3C7 697 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
EPCAM-204ENST00000456133 MAP2P11137 1827 aaKnown RBP18.78■□□□□ 0.6
EPCAM-204ENST00000456133 PKD1L3Q7Z443 1732 aa18.78■□□□□ 0.6
EPCAM-204ENST00000456133 ST20-MTHFSA0A0A6YYL1 179 aa18.78■□□□□ 0.6
EPCAM-204ENST00000456133 FYB1O15117 783 aa18.77■□□□□ 0.6
EPCAM-204ENST00000456133 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
EPCAM-204ENST00000456133 CYP27B1O15528 508 aa18.76■□□□□ 0.59
EPCAM-204ENST00000456133 PHF14O94880 888 aa18.76■□□□□ 0.59
EPCAM-204ENST00000456133 SMARCC1Q92922 1105 aaPredicted RBP18.76■□□□□ 0.59
EPCAM-204ENST00000456133 INSRP06213 1382 aa18.75■□□□□ 0.59
EPCAM-204ENST00000456133 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
EPCAM-204ENST00000456133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
EPCAM-204ENST00000456133 NSD3Q9BZ95 1437 aa18.73■□□□□ 0.59
EPCAM-204ENST00000456133 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
EPCAM-204ENST00000456133 FLT4P35916 1363 aa18.72■□□□□ 0.59
EPCAM-204ENST00000456133 KIF3CO14782 793 aa18.72■□□□□ 0.59
EPCAM-204ENST00000456133 PIGBQ92521 554 aa18.72■□□□□ 0.59
EPCAM-204ENST00000456133 KIF13BQ9NQT8 1826 aa18.71■□□□□ 0.59
EPCAM-204ENST00000456133 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
EPCAM-204ENST00000456133 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.59
EPCAM-204ENST00000456133 KIAA1551Q9HCM1 1747 aa18.71■□□□□ 0.59
EPCAM-204ENST00000456133 SSFA2P28290 1259 aa18.7■□□□□ 0.58
EPCAM-204ENST00000456133 CICQ96RK0 1608 aaPredicted RBP18.7■□□□□ 0.58
EPCAM-204ENST00000456133 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
EPCAM-204ENST00000456133 LOC102724428A0A0B4J2F2 783 aa18.69■□□□□ 0.58
EPCAM-204ENST00000456133 SIK1P57059 783 aa18.69■□□□□ 0.58
EPCAM-204ENST00000456133 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
EPCAM-204ENST00000456133 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
EPCAM-204ENST00000456133 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
EPCAM-204ENST00000456133 GNPATO15228 680 aa18.66■□□□□ 0.58
EPCAM-204ENST00000456133 TMF1P82094 1093 aa18.66■□□□□ 0.58
EPCAM-204ENST00000456133 ITPK1Q13572 414 aa18.66■□□□□ 0.58
EPCAM-204ENST00000456133 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
EPCAM-204ENST00000456133 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
EPCAM-204ENST00000456133 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
EPCAM-204ENST00000456133 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
EPCAM-204ENST00000456133 MMP10P09238 476 aa18.64■□□□□ 0.58
EPCAM-204ENST00000456133 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.58
EPCAM-204ENST00000456133 BRCA1P38398 1863 aaKnown RBP18.64■□□□□ 0.57
EPCAM-204ENST00000456133 ATP6V1AP38606 617 aa18.64■□□□□ 0.57
EPCAM-204ENST00000456133 PPM1GO15355 546 aaPredicted RBP18.63■□□□□ 0.57
EPCAM-204ENST00000456133 APLP1P51693 650 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms