RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 KCNC4Q03721 635 aa9.59□□□□□ -0.87
C1DP3-201ENST00000455013 USP4Q13107 963 aa9.59□□□□□ -0.87
C1DP3-201ENST00000455013 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
C1DP3-201ENST00000455013 BAP1Q92560 729 aa9.58□□□□□ -0.88
C1DP3-201ENST00000455013 PLA2G2EQ9NZK7 142 aa9.58□□□□□ -0.88
C1DP3-201ENST00000455013 MARSP56192 900 aaKnown RBP9.57□□□□□ -0.88
C1DP3-201ENST00000455013 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
C1DP3-201ENST00000455013 PRMT3O60678 531 aa9.56□□□□□ -0.88
C1DP3-201ENST00000455013 AGERQ15109 404 aa9.56□□□□□ -0.88
C1DP3-201ENST00000455013 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
C1DP3-201ENST00000455013 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
C1DP3-201ENST00000455013 UNCXA6NJT0 531 aa9.55□□□□□ -0.88
C1DP3-201ENST00000455013 IGSF5Q9NSI5 407 aa9.55□□□□□ -0.88
C1DP3-201ENST00000455013 PCDHB11Q9Y5F2 797 aa9.55□□□□□ -0.88
C1DP3-201ENST00000455013 ICMTO60725 284 aa9.54□□□□□ -0.88
C1DP3-201ENST00000455013 WEE1P30291 646 aa9.54□□□□□ -0.88
C1DP3-201ENST00000455013 PSME1Q06323 249 aa9.54□□□□□ -0.88
C1DP3-201ENST00000455013 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
C1DP3-201ENST00000455013 COL26A1Q96A83 441 aa9.54□□□□□ -0.88
C1DP3-201ENST00000455013 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
C1DP3-201ENST00000455013 MAP4K5Q9Y4K4 846 aa9.54□□□□□ -0.88
C1DP3-201ENST00000455013 SFI1A8K8P3 1242 aa9.53□□□□□ -0.88
C1DP3-201ENST00000455013 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
C1DP3-201ENST00000455013 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
C1DP3-201ENST00000455013 BIN2Q9UBW5 565 aaPredicted RBP9.53□□□□□ -0.88
C1DP3-201ENST00000455013 C21orf2O43822 256 aa9.52□□□□□ -0.89
C1DP3-201ENST00000455013 PTCD1O75127 700 aaKnown RBP9.52□□□□□ -0.89
C1DP3-201ENST00000455013 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
C1DP3-201ENST00000455013 NPAS4Q8IUM7 802 aa9.52□□□□□ -0.89
C1DP3-201ENST00000455013 H3BRB1 525 aa9.51□□□□□ -0.89
C1DP3-201ENST00000455013 S1PR4O95977 384 aa9.51□□□□□ -0.89
C1DP3-201ENST00000455013 ZNF16P17020 682 aaPredicted RBP9.51□□□□□ -0.89
C1DP3-201ENST00000455013 SH3BP2P78314 561 aa9.51□□□□□ -0.89
C1DP3-201ENST00000455013 SF3B2Q13435 895 aaKnown RBP9.51□□□□□ -0.89
C1DP3-201ENST00000455013 PRIMPOLQ96LW4 560 aa9.51□□□□□ -0.89
C1DP3-201ENST00000455013 TUT1Q9H6E5 874 aaKnown RBP9.51□□□□□ -0.89
C1DP3-201ENST00000455013 WASLO00401 505 aaPredicted RBP9.5□□□□□ -0.89
C1DP3-201ENST00000455013 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
C1DP3-201ENST00000455013 NKX2-3Q8TAU0 364 aa9.5□□□□□ -0.89
C1DP3-201ENST00000455013 BCL2L13Q9BXK5 485 aa9.5□□□□□ -0.89
C1DP3-201ENST00000455013 SCNN1AP37088 669 aa9.49□□□□□ -0.89
C1DP3-201ENST00000455013 COL19A1Q14993 1142 aa9.49□□□□□ -0.89
C1DP3-201ENST00000455013 KCTD15Q96SI1 283 aaPredicted RBP9.49□□□□□ -0.89
C1DP3-201ENST00000455013 A0A0G2JS52 829 aa9.48□□□□□ -0.89
C1DP3-201ENST00000455013 ANKRD33BA6NCL7 494 aa9.48□□□□□ -0.89
C1DP3-201ENST00000455013 FOXO3O43524 673 aa9.48□□□□□ -0.89
C1DP3-201ENST00000455013 ABL1P00519 1130 aa9.48□□□□□ -0.89
C1DP3-201ENST00000455013 IGFBP4P22692 258 aa9.48□□□□□ -0.89
C1DP3-201ENST00000455013 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
C1DP3-201ENST00000455013 WNT7BP56706 349 aa9.48□□□□□ -0.89
C1DP3-201ENST00000455013 ZNF211Q13398 564 aaPredicted RBP9.48□□□□□ -0.89
C1DP3-201ENST00000455013 KIAA1522Q9P206 1035 aaPredicted RBP9.48□□□□□ -0.89
C1DP3-201ENST00000455013 VAMP1P23763 118 aa9.47□□□□□ -0.89
C1DP3-201ENST00000455013 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
C1DP3-201ENST00000455013 TSEN2Q8NCE0 465 aaKnown RBP9.47□□□□□ -0.89
C1DP3-201ENST00000455013 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
C1DP3-201ENST00000455013 MRRFQ96E11 262 aaKnown RBP9.47□□□□□ -0.89
C1DP3-201ENST00000455013 ASB16Q96NS5 453 aa9.47□□□□□ -0.89
C1DP3-201ENST00000455013 HINFPQ9BQA5 517 aa9.47□□□□□ -0.89
C1DP3-201ENST00000455013 DCTN4Q9UJW0 460 aa9.47□□□□□ -0.89
C1DP3-201ENST00000455013 FKBP4Q02790 459 aaKnown RBP eCLIP9.46□□□□□ -0.9
C1DP3-201ENST00000455013 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
C1DP3-201ENST00000455013 INTS6LQ5JSJ4 861 aaKnown RBP9.46□□□□□ -0.9
C1DP3-201ENST00000455013 ZNF358Q9NW07 568 aa9.46□□□□□ -0.9
C1DP3-201ENST00000455013 NPR3P17342 541 aa9.45□□□□□ -0.9
C1DP3-201ENST00000455013 TRIM32Q13049 653 aa9.45□□□□□ -0.9
C1DP3-201ENST00000455013 ECM1Q16610 540 aa9.45□□□□□ -0.9
C1DP3-201ENST00000455013 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
C1DP3-201ENST00000455013 HELQQ8TDG4 1101 aa9.45□□□□□ -0.9
C1DP3-201ENST00000455013 GIPC2Q8TF65 315 aa9.45□□□□□ -0.9
C1DP3-201ENST00000455013 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
C1DP3-201ENST00000455013 ARHGAP4P98171 946 aa9.44□□□□□ -0.9
C1DP3-201ENST00000455013 ZNF326Q5BKZ1 582 aaKnown RBP9.44□□□□□ -0.9
C1DP3-201ENST00000455013 ZSCAN29Q8IWY8 852 aaPredicted RBP9.44□□□□□ -0.9
C1DP3-201ENST00000455013 SEPT3Q9UH03 358 aa9.44□□□□□ -0.9
C1DP3-201ENST00000455013 TMEM229AB2RXF0 380 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 BACH1O14867 736 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 IGSF3O75054 1194 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 GGCXP38435 758 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 SCTRP47872 440 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 FBXO33Q7Z6M2 555 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 RGL4Q8IZJ4 473 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 MPNDQ8N594 471 aa9.43□□□□□ -0.9
C1DP3-201ENST00000455013 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
C1DP3-201ENST00000455013 ZBTB24O43167 697 aaPredicted RBP9.42□□□□□ -0.9
C1DP3-201ENST00000455013 MAPK1P28482 360 aa9.42□□□□□ -0.9
C1DP3-201ENST00000455013 SCNN1DP51172 638 aa9.42□□□□□ -0.9
C1DP3-201ENST00000455013 DHX9Q08211 1270 aaKnown RBP9.42□□□□□ -0.9
C1DP3-201ENST00000455013 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
C1DP3-201ENST00000455013 ANKLE1Q8NAG6 615 aa9.42□□□□□ -0.9
C1DP3-201ENST00000455013 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
C1DP3-201ENST00000455013 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
C1DP3-201ENST00000455013 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
C1DP3-201ENST00000455013 EPHA4P54764 986 aa9.41□□□□□ -0.9
C1DP3-201ENST00000455013 FAM13AO94988 1023 aa9.4□□□□□ -0.9
C1DP3-201ENST00000455013 RPIAP49247 311 aa9.4□□□□□ -0.9
C1DP3-201ENST00000455013 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
C1DP3-201ENST00000455013 MKNK1Q9BUB5 465 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms