RNA–Protein interactions for RNA: ENST00000454936.5

HDAC10-206, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-206ENST00000454936 NUDCQ9Y266 331 aa22.89■■□□□ 1.25
HDAC10-206ENST00000454936 ONECUT3O60422 494 aaPredicted RBP22.88■■□□□ 1.25
HDAC10-206ENST00000454936 DDB1Q16531 1140 aa22.88■■□□□ 1.25
HDAC10-206ENST00000454936 LRRC37A3O60309 1634 aa22.88■■□□□ 1.25
HDAC10-206ENST00000454936 DISP2A7MBM2 1401 aa22.88■■□□□ 1.25
HDAC10-206ENST00000454936 TATP17735 454 aaPredicted RBP22.87■■□□□ 1.25
HDAC10-206ENST00000454936 PARP4Q9UKK3 1724 aaKnown RBP22.87■■□□□ 1.25
HDAC10-206ENST00000454936 PDE3BQ13370 1112 aa22.86■■□□□ 1.25
HDAC10-206ENST00000454936 CDCA7Q9BWT1 371 aaPredicted RBP22.85■■□□□ 1.25
HDAC10-206ENST00000454936 NCAPD2Q15021 1401 aa22.85■■□□□ 1.25
HDAC10-206ENST00000454936 EXOC5O00471 708 aa22.84■■□□□ 1.25
HDAC10-206ENST00000454936 KRT27Q7Z3Y8 459 aa22.84■■□□□ 1.25
HDAC10-206ENST00000454936 DDX54Q8TDD1 881 aaKnown RBP22.84■■□□□ 1.25
HDAC10-206ENST00000454936 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
HDAC10-206ENST00000454936 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
HDAC10-206ENST00000454936 KDRP35968 1356 aa22.82■■□□□ 1.24
HDAC10-206ENST00000454936 TNS2Q63HR2 1409 aa22.82■■□□□ 1.24
HDAC10-206ENST00000454936 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.24
HDAC10-206ENST00000454936 ZCRB1Q8TBF4 217 aaKnown RBP22.81■■□□□ 1.24
HDAC10-206ENST00000454936 PRKAR2BP31323 418 aa22.8■■□□□ 1.24
HDAC10-206ENST00000454936 SHANK3Q9BYB0 1731 aa22.79■■□□□ 1.24
HDAC10-206ENST00000454936 MARCH10Q8NA82 808 aaPredicted RBP22.78■■□□□ 1.24
HDAC10-206ENST00000454936 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
HDAC10-206ENST00000454936 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
HDAC10-206ENST00000454936 PKD1L3Q7Z443 1732 aa22.76■■□□□ 1.23
HDAC10-206ENST00000454936 SPG7Q9UQ90 795 aa22.76■■□□□ 1.23
HDAC10-206ENST00000454936 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
HDAC10-206ENST00000454936 ADAMTS8Q9UP79 889 aa22.75■■□□□ 1.23
HDAC10-206ENST00000454936 SUPT16HQ9Y5B9 1047 aaKnown RBP22.75■■□□□ 1.23
HDAC10-206ENST00000454936 PCDH11XQ9BZA7 1347 aa22.75■■□□□ 1.23
HDAC10-206ENST00000454936 PCDH11YQ9BZA8 1340 aa22.75■■□□□ 1.23
HDAC10-206ENST00000454936 PLEKHO1Q53GL0 409 aaPredicted RBP22.74■■□□□ 1.23
HDAC10-206ENST00000454936 PHACTR3Q96KR7 559 aa22.74■■□□□ 1.23
HDAC10-206ENST00000454936 CYP27B1O15528 508 aa22.73■■□□□ 1.23
HDAC10-206ENST00000454936 FCHSD2O94868 740 aa22.73■■□□□ 1.23
HDAC10-206ENST00000454936 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
HDAC10-206ENST00000454936 SENP3-EIF4A1A0A087X0R7 540 aa22.72■■□□□ 1.23
HDAC10-206ENST00000454936 MTHFSDQ2M296 383 aaKnown RBP22.72■■□□□ 1.23
HDAC10-206ENST00000454936 ACSBG1Q96GR2 724 aa22.71■■□□□ 1.23
HDAC10-206ENST00000454936 AMOTQ4VCS5 1084 aa22.7■■□□□ 1.23
HDAC10-206ENST00000454936 NEFMP07197 916 aa22.7■■□□□ 1.22
HDAC10-206ENST00000454936 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
HDAC10-206ENST00000454936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.69■■□□□ 1.22
HDAC10-206ENST00000454936 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
HDAC10-206ENST00000454936 PHKG2P15735 406 aa22.69■■□□□ 1.22
HDAC10-206ENST00000454936 IFNL2Q8IZJ0 200 aa22.69■■□□□ 1.22
HDAC10-206ENST00000454936 SYTL4Q96C24 671 aaPredicted RBP22.69■■□□□ 1.22
HDAC10-206ENST00000454936 FAM196AQ6ZSG2 479 aa22.68■■□□□ 1.22
HDAC10-206ENST00000454936 PLEKHF1Q96S99 279 aa22.67■■□□□ 1.22
HDAC10-206ENST00000454936 TRIM37O94972 964 aa22.67■■□□□ 1.22
HDAC10-206ENST00000454936 DOT1LQ8TEK3 1739 aa22.66■■□□□ 1.22
HDAC10-206ENST00000454936 MPRIPQ6WCQ1 1025 aa22.66■■□□□ 1.22
HDAC10-206ENST00000454936 ZBED9Q6R2W3 1325 aa22.66■■□□□ 1.22
HDAC10-206ENST00000454936 NEFLP07196 543 aa22.65■■□□□ 1.22
HDAC10-206ENST00000454936 PTF1AQ7RTS3 328 aa22.65■■□□□ 1.22
HDAC10-206ENST00000454936 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
HDAC10-206ENST00000454936 SBF2Q86WG5 1849 aa22.65■■□□□ 1.22
HDAC10-206ENST00000454936 KCNQ2O43526 872 aa22.65■■□□□ 1.22
HDAC10-206ENST00000454936 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
HDAC10-206ENST00000454936 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
HDAC10-206ENST00000454936 GAS2L2Q8NHY3 880 aa22.64■■□□□ 1.21
HDAC10-206ENST00000454936 TOGARAM1Q9Y4F4 1720 aa22.63■■□□□ 1.21
HDAC10-206ENST00000454936 AKAP4Q5JQC9 854 aa22.63■■□□□ 1.21
HDAC10-206ENST00000454936 RUNDC1Q96C34 613 aa22.62■■□□□ 1.21
HDAC10-206ENST00000454936 VIRMAQ69YN4 1812 aaKnown RBP22.62■■□□□ 1.21
HDAC10-206ENST00000454936 DLG5Q8TDM6 1919 aa22.61■■□□□ 1.21
HDAC10-206ENST00000454936 PLEKHG2Q9H7P9 1386 aa22.61■■□□□ 1.21
HDAC10-206ENST00000454936 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
HDAC10-206ENST00000454936 KDM6AO15550 1401 aaPredicted RBP22.6■■□□□ 1.21
HDAC10-206ENST00000454936 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
HDAC10-206ENST00000454936 LGR6Q9HBX8 967 aa22.6■■□□□ 1.21
HDAC10-206ENST00000454936 MAP3K5Q99683 1374 aa22.6■■□□□ 1.21
HDAC10-206ENST00000454936 GNAT3A8MTJ3 354 aa22.59■■□□□ 1.21
HDAC10-206ENST00000454936 DCTN1Q14203 1278 aa22.59■■□□□ 1.21
HDAC10-206ENST00000454936 DCAF5Q96JK2 942 aa22.59■■□□□ 1.21
HDAC10-206ENST00000454936 ITGB4P16144 1822 aa22.58■■□□□ 1.21
HDAC10-206ENST00000454936 APAF1O14727 1248 aa22.58■■□□□ 1.21
HDAC10-206ENST00000454936 HSP90AB1P08238 724 aaKnown RBP22.58■■□□□ 1.21
HDAC10-206ENST00000454936 NKX1-1Q15270 411 aaPredicted RBP22.58■■□□□ 1.21
HDAC10-206ENST00000454936 NFE2L2Q16236 605 aa22.58■■□□□ 1.21
HDAC10-206ENST00000454936 MCM10Q7L590 875 aa22.58■■□□□ 1.21
HDAC10-206ENST00000454936 UPF1Q92900 1129 aaKnown RBP eCLIP22.57■■□□□ 1.2
HDAC10-206ENST00000454936 NHSQ6T4R5 1651 aa22.57■■□□□ 1.2
HDAC10-206ENST00000454936 RIPK4P57078 832 aa22.57■■□□□ 1.2
HDAC10-206ENST00000454936 FKBP8Q14318 412 aa22.57■■□□□ 1.2
HDAC10-206ENST00000454936 RTF1Q92541 710 aaKnown RBP22.57■■□□□ 1.2
HDAC10-206ENST00000454936 SCN11AQ9UI33 1791 aa22.57■■□□□ 1.2
HDAC10-206ENST00000454936 TMPOP42166 694 aaKnown RBP22.56■■□□□ 1.2
HDAC10-206ENST00000454936 SF3B2Q13435 895 aaKnown RBP22.56■■□□□ 1.2
HDAC10-206ENST00000454936 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
HDAC10-206ENST00000454936 BCL9O00512 1426 aa22.56■■□□□ 1.2
HDAC10-206ENST00000454936 TNS1Q9HBL0 1735 aaKnown RBP22.55■■□□□ 1.2
HDAC10-206ENST00000454936 RNMTO43148 476 aaKnown RBP22.55■■□□□ 1.2
HDAC10-206ENST00000454936 APBA3O96018 575 aa22.55■■□□□ 1.2
HDAC10-206ENST00000454936 BCL11BQ9C0K0 894 aaPredicted RBP22.55■■□□□ 1.2
HDAC10-206ENST00000454936 BTAF1O14981 1849 aa22.54■■□□□ 1.2
HDAC10-206ENST00000454936 CABP4P57796 275 aa22.54■■□□□ 1.2
HDAC10-206ENST00000454936 IL17REQ8NFR9 667 aa22.54■■□□□ 1.2
HDAC10-206ENST00000454936 THUMPD2Q9BTF0 503 aaKnown RBP22.54■■□□□ 1.2
HDAC10-206ENST00000454936 TMOD3Q9NYL9 352 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms