RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 PARD3Q8TEW0 1356 aa21.06■□□□□ 0.96
RFC5-204ENST00000454402 HMOX1P09601 288 aa21.05■□□□□ 0.96
RFC5-204ENST00000454402 IGSF1Q8N6C5 1336 aa21.05■□□□□ 0.96
RFC5-204ENST00000454402 DEFB132Q7Z7B7 95 aa21.04■□□□□ 0.96
RFC5-204ENST00000454402 PTF1AQ7RTS3 328 aa21.02■□□□□ 0.95
RFC5-204ENST00000454402 RALBP1Q15311 655 aa21.01■□□□□ 0.95
RFC5-204ENST00000454402 COL3A1P02461 1466 aaPredicted RBP21■□□□□ 0.95
RFC5-204ENST00000454402 APBA3O96018 575 aa21■□□□□ 0.95
RFC5-204ENST00000454402 NCAPD2Q15021 1401 aa21■□□□□ 0.95
RFC5-204ENST00000454402 KCNQ2O43526 872 aa20.99■□□□□ 0.95
RFC5-204ENST00000454402 CCDC125Q86Z20 511 aa20.99■□□□□ 0.95
RFC5-204ENST00000454402 SYTL4Q96C24 671 aaPredicted RBP20.99■□□□□ 0.95
RFC5-204ENST00000454402 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
RFC5-204ENST00000454402 PCDH11XQ9BZA7 1347 aa20.99■□□□□ 0.95
RFC5-204ENST00000454402 PCDH11YQ9BZA8 1340 aa20.99■□□□□ 0.95
RFC5-204ENST00000454402 EN1Q05925 392 aaPredicted RBP20.98■□□□□ 0.95
RFC5-204ENST00000454402 BAG6P46379 1132 aa20.97■□□□□ 0.95
RFC5-204ENST00000454402 RGPD1P0DJD0 1748 aa20.97■□□□□ 0.95
RFC5-204ENST00000454402 SHANK3Q9BYB0 1731 aa20.97■□□□□ 0.95
RFC5-204ENST00000454402 CYP27B1O15528 508 aa20.96■□□□□ 0.95
RFC5-204ENST00000454402 U2AF1L5P0DN76 240 aaPredicted RBP20.96■□□□□ 0.95
RFC5-204ENST00000454402 U2AF1Q01081 240 aaKnown RBP eCLIP20.96■□□□□ 0.95
RFC5-204ENST00000454402 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
RFC5-204ENST00000454402 PRKRIP1Q9H875 184 aaPredicted RBP20.96■□□□□ 0.95
RFC5-204ENST00000454402 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
RFC5-204ENST00000454402 PLEKHO1Q53GL0 409 aaPredicted RBP20.95■□□□□ 0.94
RFC5-204ENST00000454402 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
RFC5-204ENST00000454402 TNS1Q9HBL0 1735 aaKnown RBP20.94■□□□□ 0.94
RFC5-204ENST00000454402 PRIM1P49642 420 aaKnown RBP20.93■□□□□ 0.94
RFC5-204ENST00000454402 BCL11BQ9C0K0 894 aaPredicted RBP20.93■□□□□ 0.94
RFC5-204ENST00000454402 EZH2Q15910 746 aaKnown RBP20.93■□□□□ 0.94
RFC5-204ENST00000454402 PKD1L3Q7Z443 1732 aa20.92■□□□□ 0.94
RFC5-204ENST00000454402 KDRP35968 1356 aa20.92■□□□□ 0.94
RFC5-204ENST00000454402 SBF2Q86WG5 1849 aa20.92■□□□□ 0.94
RFC5-204ENST00000454402 PHKG2P15735 406 aa20.91■□□□□ 0.94
RFC5-204ENST00000454402 IFNL2Q8IZJ0 200 aa20.91■□□□□ 0.94
RFC5-204ENST00000454402 DOT1LQ8TEK3 1739 aa20.9■□□□□ 0.94
RFC5-204ENST00000454402 ANP32CO43423 234 aa20.89■□□□□ 0.94
RFC5-204ENST00000454402 PRKAR2BP31323 418 aa20.89■□□□□ 0.94
RFC5-204ENST00000454402 AMOTQ4VCS5 1084 aa20.89■□□□□ 0.94
RFC5-204ENST00000454402 C1orf141Q5JVX7 400 aa20.89■□□□□ 0.94
RFC5-204ENST00000454402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.89■□□□□ 0.94
RFC5-204ENST00000454402 KAT6BQ8WYB5 2073 aa20.89■□□□□ 0.93
RFC5-204ENST00000454402 BCL9O00512 1426 aa20.89■□□□□ 0.93
RFC5-204ENST00000454402 MPRIPQ6WCQ1 1025 aa20.89■□□□□ 0.93
RFC5-204ENST00000454402 NHSQ6T4R5 1651 aa20.88■□□□□ 0.93
RFC5-204ENST00000454402 MTHFSDQ2M296 383 aaKnown RBP20.87■□□□□ 0.93
RFC5-204ENST00000454402 RSPH6AQ9H0K4 717 aa20.87■□□□□ 0.93
RFC5-204ENST00000454402 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
RFC5-204ENST00000454402 CAMKK2Q96RR4 588 aa20.85■□□□□ 0.93
RFC5-204ENST00000454402 TOGARAM1Q9Y4F4 1720 aa20.83■□□□□ 0.92
RFC5-204ENST00000454402 NKX1-1Q15270 411 aaPredicted RBP20.83■□□□□ 0.92
RFC5-204ENST00000454402 BTAF1O14981 1849 aa20.83■□□□□ 0.92
RFC5-204ENST00000454402 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
RFC5-204ENST00000454402 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
RFC5-204ENST00000454402 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
RFC5-204ENST00000454402 FCHSD2O94868 740 aa20.81■□□□□ 0.92
RFC5-204ENST00000454402 HSP90AB1P08238 724 aaKnown RBP20.81■□□□□ 0.92
RFC5-204ENST00000454402 KCNQ4P56696 695 aa20.81■□□□□ 0.92
RFC5-204ENST00000454402 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
RFC5-204ENST00000454402 PIGBQ92521 554 aa20.8■□□□□ 0.92
RFC5-204ENST00000454402 DCAF5Q96JK2 942 aa20.8■□□□□ 0.92
RFC5-204ENST00000454402 KDM6AO15550 1401 aaPredicted RBP20.8■□□□□ 0.92
RFC5-204ENST00000454402 PLSCR1O15162 318 aa20.8■□□□□ 0.92
RFC5-204ENST00000454402 NEFMP07197 916 aa20.8■□□□□ 0.92
RFC5-204ENST00000454402 LGR6Q9HBX8 967 aa20.8■□□□□ 0.92
RFC5-204ENST00000454402 CABP4P57796 275 aa20.79■□□□□ 0.92
RFC5-204ENST00000454402 TXNRD1Q16881 649 aa20.79■□□□□ 0.92
RFC5-204ENST00000454402 CCDC146Q8IYE0 955 aa20.79■□□□□ 0.92
RFC5-204ENST00000454402 GAS2L2Q8NHY3 880 aa20.79■□□□□ 0.92
RFC5-204ENST00000454402 PLEKHG2Q9H7P9 1386 aa20.79■□□□□ 0.92
RFC5-204ENST00000454402 PSDA5PKW4 1024 aaPredicted RBP20.77■□□□□ 0.92
RFC5-204ENST00000454402 PROM2Q8N271 834 aa20.77■□□□□ 0.92
RFC5-204ENST00000454402 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.91
RFC5-204ENST00000454402 NFATC2IPQ8NCF5 419 aa20.76■□□□□ 0.91
RFC5-204ENST00000454402 ITGB4P16144 1822 aa20.76■□□□□ 0.91
RFC5-204ENST00000454402 MAP3K5Q99683 1374 aa20.75■□□□□ 0.91
RFC5-204ENST00000454402 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
RFC5-204ENST00000454402 ERVV-2B6SEH9 535 aa20.75■□□□□ 0.91
RFC5-204ENST00000454402 RNMTO43148 476 aaKnown RBP20.75■□□□□ 0.91
RFC5-204ENST00000454402 MRS2Q9HD23 443 aa20.75■□□□□ 0.91
RFC5-204ENST00000454402 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
RFC5-204ENST00000454402 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
RFC5-204ENST00000454402 PALLDQ8WX93 1383 aa20.74■□□□□ 0.91
RFC5-204ENST00000454402 R3HDM1Q15032 1099 aaKnown RBP20.73■□□□□ 0.91
RFC5-204ENST00000454402 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
RFC5-204ENST00000454402 DCTN1Q14203 1278 aa20.73■□□□□ 0.91
RFC5-204ENST00000454402 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
RFC5-204ENST00000454402 LRRC4BQ9NT99 713 aa20.73■□□□□ 0.91
RFC5-204ENST00000454402 CCNL1Q9UK58 526 aaPredicted RBP20.73■□□□□ 0.91
RFC5-204ENST00000454402 RREB1Q92766 1687 aa20.73■□□□□ 0.91
RFC5-204ENST00000454402 NUP188Q5SRE5 1749 aa20.72■□□□□ 0.91
RFC5-204ENST00000454402 SENP3-EIF4A1A0A087X0R7 540 aa20.72■□□□□ 0.91
RFC5-204ENST00000454402 NBPF14Q5TI25 921 aa20.72■□□□□ 0.91
RFC5-204ENST00000454402 MCM10Q7L590 875 aa20.72■□□□□ 0.91
RFC5-204ENST00000454402 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
RFC5-204ENST00000454402 NEUROD2Q15784 382 aa20.71■□□□□ 0.91
RFC5-204ENST00000454402 RBM42Q9BTD8 480 aaKnown RBP20.71■□□□□ 0.91
RFC5-204ENST00000454402 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
RFC5-204ENST00000454402 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms