RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 CLASP1Q7Z460 1538 aa20.91■□□□□ 0.94
TCF3-204ENST00000453954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.91■□□□□ 0.945e-7■■■□□ 18.1
TCF3-204ENST00000453954 ANKRD36BQ8N2N9 1353 aa20.91■□□□□ 0.94
TCF3-204ENST00000453954 MAP7D2Q96T17 732 aa20.91■□□□□ 0.94
TCF3-204ENST00000453954 GOLGA6L4A6NEF3 574 aa20.91■□□□□ 0.94
TCF3-204ENST00000453954 DCTPP1Q9H773 170 aa20.91■□□□□ 0.94
TCF3-204ENST00000453954 COG3Q96JB2 828 aa20.9■□□□□ 0.94
TCF3-204ENST00000453954 CHD1O14646 1710 aa20.9■□□□□ 0.94
TCF3-204ENST00000453954 MADDQ8WXG6 1647 aa20.89■□□□□ 0.94
TCF3-204ENST00000453954 CDC42BPBQ9Y5S2 1711 aa20.89■□□□□ 0.93
TCF3-204ENST00000453954 CEP85Q6P2H3 762 aa20.89■□□□□ 0.93
TCF3-204ENST00000453954 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.89■□□□□ 0.93
TCF3-204ENST00000453954 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
TCF3-204ENST00000453954 PLCH2O75038 1416 aa20.88■□□□□ 0.93
TCF3-204ENST00000453954 PHF14O94880 888 aa20.88■□□□□ 0.93
TCF3-204ENST00000453954 NAP1L2Q9ULW6 460 aaPredicted RBP20.88■□□□□ 0.93
TCF3-204ENST00000453954 G2E3Q7L622 706 aa20.88■□□□□ 0.93
TCF3-204ENST00000453954 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
TCF3-204ENST00000453954 DYNC1I1O14576 645 aa20.87■□□□□ 0.93
TCF3-204ENST00000453954 EIF2S2P20042 333 aaKnown RBP20.87■□□□□ 0.93
TCF3-204ENST00000453954 NOLC1Q14978 699 aaKnown RBP eCLIP20.87■□□□□ 0.93
TCF3-204ENST00000453954 CCDC9Q9Y3X0 531 aaKnown RBP20.87■□□□□ 0.93
TCF3-204ENST00000453954 ZNF771Q7L3S4 317 aaPredicted RBP20.86■□□□□ 0.93
TCF3-204ENST00000453954 IFT57Q9NWB7 429 aa20.86■□□□□ 0.93
TCF3-204ENST00000453954 SMC3Q9UQE7 1217 aa20.86■□□□□ 0.93
TCF3-204ENST00000453954 PDE1AP54750 535 aa20.86■□□□□ 0.93
TCF3-204ENST00000453954 LMOD3Q0VAK6 560 aa20.86■□□□□ 0.93
TCF3-204ENST00000453954 FBXO31Q5XUX0 539 aaPredicted RBP20.86■□□□□ 0.93
TCF3-204ENST00000453954 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
TCF3-204ENST00000453954 IL16Q14005 1332 aa20.86■□□□□ 0.93
TCF3-204ENST00000453954 TXNDC2Q86VQ3 553 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 ANKRD44Q8N8A2 993 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 CLTCL1P53675 1640 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 KIF3AQ9Y496 699 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 FOXO3O43524 673 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 CWC27Q6UX04 472 aaKnown RBP20.85■□□□□ 0.93
TCF3-204ENST00000453954 CFAP44Q96MT7 982 aa20.85■□□□□ 0.93
TCF3-204ENST00000453954 CKAP2LQ8IYA6 745 aa20.84■□□□□ 0.93
TCF3-204ENST00000453954 PPFIA3O75145 1194 aa20.84■□□□□ 0.93
TCF3-204ENST00000453954 SURF6O75683 361 aaKnown RBP20.84■□□□□ 0.93
TCF3-204ENST00000453954 FAM173BQ6P4H8 233 aa20.84■□□□□ 0.93
TCF3-204ENST00000453954 TCEANC2Q96MN5 208 aa20.84■□□□□ 0.93
TCF3-204ENST00000453954 ZNF500O60304 480 aaPredicted RBP20.83■□□□□ 0.93
TCF3-204ENST00000453954 CCDC83Q8IWF9 413 aa20.83■□□□□ 0.93
TCF3-204ENST00000453954 CEBPZQ03701 1054 aaKnown RBP20.82■□□□□ 0.92
TCF3-204ENST00000453954 RPAP2Q8IXW5 612 aaPredicted RBP20.82■□□□□ 0.92
TCF3-204ENST00000453954 NCOA3Q9Y6Q9 1424 aa20.82■□□□□ 0.92
TCF3-204ENST00000453954 C16orf45Q96MC5 204 aaPredicted RBP20.82■□□□□ 0.92
TCF3-204ENST00000453954 MSH6P52701 1360 aa20.82■□□□□ 0.92
TCF3-204ENST00000453954 LRRCC1Q9C099 1032 aa20.82■□□□□ 0.92
TCF3-204ENST00000453954 ZMYM3Q14202 1370 aa20.81■□□□□ 0.92
TCF3-204ENST00000453954 MX1P20591 662 aa20.81■□□□□ 0.92
TCF3-204ENST00000453954 PDCL2Q8N4E4 241 aa20.81■□□□□ 0.92
TCF3-204ENST00000453954 IQGAP3Q86VI3 1631 aa20.81■□□□□ 0.92
TCF3-204ENST00000453954 STK3Q13188 491 aa20.81■□□□□ 0.92
TCF3-204ENST00000453954 U2AF2P26368 475 aaKnown RBP eCLIP20.8■□□□□ 0.927e-7■■□□□ 12.2
TCF3-204ENST00000453954 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.8■□□□□ 0.92
TCF3-204ENST00000453954 V9GYY5 206 aaPredicted RBP20.8■□□□□ 0.92
TCF3-204ENST00000453954 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
TCF3-204ENST00000453954 NECAB1Q8N987 351 aa20.79■□□□□ 0.92
TCF3-204ENST00000453954 ESYT1Q9BSJ8 1104 aa20.79■□□□□ 0.92
TCF3-204ENST00000453954 PREX2Q70Z35 1606 aa20.79■□□□□ 0.92
TCF3-204ENST00000453954 GNAI2P04899 355 aa20.79■□□□□ 0.92
TCF3-204ENST00000453954 SRCIN1Q9C0H9 1055 aa20.79■□□□□ 0.92
TCF3-204ENST00000453954 ARHGAP45Q92619 1136 aa20.79■□□□□ 0.92
TCF3-204ENST00000453954 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
TCF3-204ENST00000453954 LRRFIP2Q9Y608 721 aaKnown RBP20.79■□□□□ 0.92
TCF3-204ENST00000453954 WDR33Q9C0J8 1336 aaKnown RBP20.78■□□□□ 0.92
TCF3-204ENST00000453954 ZBTB9Q96C00 473 aa20.78■□□□□ 0.92
TCF3-204ENST00000453954 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
TCF3-204ENST00000453954 UNC13BO14795 1591 aa20.78■□□□□ 0.92
TCF3-204ENST00000453954 DNM1Q05193 864 aaKnown RBP20.77■□□□□ 0.92
TCF3-204ENST00000453954 TRIM5Q9C035 493 aa20.77■□□□□ 0.92
TCF3-204ENST00000453954 ABCC4O15439 1325 aa20.77■□□□□ 0.92
TCF3-204ENST00000453954 PDLIM2Q96JY6 352 aa20.77■□□□□ 0.92
TCF3-204ENST00000453954 CASTP20810 708 aaKnown RBP20.76■□□□□ 0.91
TCF3-204ENST00000453954 HS1BP3Q53T59 392 aa20.76■□□□□ 0.91
TCF3-204ENST00000453954 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
TCF3-204ENST00000453954 PNMA6EA0A0J9YXQ4 647 aa20.76■□□□□ 0.91
TCF3-204ENST00000453954 CCDC94Q9BW85 323 aaPredicted RBP20.76■□□□□ 0.91
TCF3-204ENST00000453954 ESF1Q9H501 851 aaKnown RBP20.76■□□□□ 0.91
TCF3-204ENST00000453954 FANCAO15360 1455 aa20.76■□□□□ 0.91
TCF3-204ENST00000453954 FGD1P98174 961 aa20.76■□□□□ 0.91
TCF3-204ENST00000453954 MTERF4Q7Z6M4 381 aaKnown RBP20.76■□□□□ 0.91
TCF3-204ENST00000453954 VIRMAQ69YN4 1812 aaKnown RBP20.75■□□□□ 0.91
TCF3-204ENST00000453954 HSP90AB2PQ58FF8 381 aa20.75■□□□□ 0.91
TCF3-204ENST00000453954 TRERF1Q96PN7 1200 aa20.75■□□□□ 0.91
TCF3-204ENST00000453954 DIAPH3Q9NSV4 1193 aa20.75■□□□□ 0.91
TCF3-204ENST00000453954 TRPM2O94759 1503 aa20.74■□□□□ 0.91
TCF3-204ENST00000453954 IQGAP1P46940 1657 aa20.74■□□□□ 0.91
TCF3-204ENST00000453954 BRD1O95696 1058 aa20.74■□□□□ 0.91
TCF3-204ENST00000453954 ANXA1P04083 346 aa20.74■□□□□ 0.91
TCF3-204ENST00000453954 CYP2E1P05181 493 aaPredicted RBP20.74■□□□□ 0.91
TCF3-204ENST00000453954 HMGN5P82970 282 aaKnown RBP20.74■□□□□ 0.91
TCF3-204ENST00000453954 CCDC183Q5T5S1 534 aa20.74■□□□□ 0.91
TCF3-204ENST00000453954 MYOM1P52179 1685 aa20.73■□□□□ 0.91
TCF3-204ENST00000453954 PTGS1P23219 599 aa20.73■□□□□ 0.91
TCF3-204ENST00000453954 BICD2Q8TD16 824 aa20.73■□□□□ 0.91
TCF3-204ENST00000453954 JAKMIP1Q96N16 626 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms