RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 WWC1Q8IX03 1113 aa8.11□□□□□ -1.11
SSXP1-201ENST00000453640 ATP5J2-PTCD1G3V325 749 aa8.1□□□□□ -1.11
SSXP1-201ENST00000453640 TERTO14746 1132 aaKnown RBP8.1□□□□□ -1.11
SSXP1-201ENST00000453640 NFX1Q12986 1120 aaKnown RBP8.1□□□□□ -1.11
SSXP1-201ENST00000453640 LCE2CQ5TA81 110 aa8.1□□□□□ -1.11
SSXP1-201ENST00000453640 PROSER2Q86WR7 435 aaPredicted RBP8.1□□□□□ -1.11
SSXP1-201ENST00000453640 DOLKQ9UPQ8 538 aa8.1□□□□□ -1.11
SSXP1-201ENST00000453640 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
SSXP1-201ENST00000453640 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
SSXP1-201ENST00000453640 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
SSXP1-201ENST00000453640 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 A6NJR5 290 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 VEGFBP49765 207 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 CYP2U1Q7Z449 544 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 PLPP7Q8NBV4 271 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 TRIM52Q96A61 297 aa8.08□□□□□ -1.12
SSXP1-201ENST00000453640 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
SSXP1-201ENST00000453640 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
SSXP1-201ENST00000453640 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
SSXP1-201ENST00000453640 MEN1O00255 615 aa8.06□□□□□ -1.12
SSXP1-201ENST00000453640 WFS1O76024 890 aa8.06□□□□□ -1.12
SSXP1-201ENST00000453640 STAU1O95793 577 aaKnown RBP8.06□□□□□ -1.12
SSXP1-201ENST00000453640 MYCP01106 439 aaPredicted RBP8.06□□□□□ -1.12
SSXP1-201ENST00000453640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
SSXP1-201ENST00000453640 ARHGEF10LQ9HCE6 1279 aa8.06□□□□□ -1.12
SSXP1-201ENST00000453640 RNF144AP50876 292 aaPredicted RBP8.05□□□□□ -1.12
SSXP1-201ENST00000453640 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
SSXP1-201ENST00000453640 UCN2Q96RP3 112 aa8.05□□□□□ -1.12
SSXP1-201ENST00000453640 RAB6BQ9NRW1 208 aa8.05□□□□□ -1.12
SSXP1-201ENST00000453640 H3BM21 787 aa8.04□□□□□ -1.12
SSXP1-201ENST00000453640 SKIP12755 728 aa8.04□□□□□ -1.12
SSXP1-201ENST00000453640 PTSQ03393 145 aa8.04□□□□□ -1.12
SSXP1-201ENST00000453640 USP4Q13107 963 aa8.04□□□□□ -1.12
SSXP1-201ENST00000453640 CLN3Q13286 438 aa8.04□□□□□ -1.12
SSXP1-201ENST00000453640 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SSXP1-201ENST00000453640 GNRH1P01148 92 aa8.03□□□□□ -1.12
SSXP1-201ENST00000453640 IL2RAP01589 272 aa8.03□□□□□ -1.12
SSXP1-201ENST00000453640 NPAS3Q8IXF0 933 aa8.03□□□□□ -1.12
SSXP1-201ENST00000453640 NFATC2IPQ8NCF5 419 aa8.03□□□□□ -1.12
SSXP1-201ENST00000453640 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 PRICKLE2Q7Z3G6 844 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 GLMNQ92990 594 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 HRH3Q9Y5N1 445 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 ERBB4Q15303 1308 aa8.02□□□□□ -1.13
SSXP1-201ENST00000453640 SENP3-EIF4A1A0A087X0R7 540 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 SLC35F4A4IF30 521 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 GPC1P35052 558 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 XAGE2Q96GT9 111 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 GRIP2Q9C0E4 1043 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 GTF3C3Q9Y5Q9 886 aa8.01□□□□□ -1.13
SSXP1-201ENST00000453640 USP17L5A8MUK1 530 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 RHOQP17081 205 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 SCNN1DP51172 638 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 NCOA4Q13772 614 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 CCDC155Q8N6L0 562 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 SIRT1Q96EB6 747 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 ESYT1Q9BSJ8 1104 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 PCDHGA11Q9Y5H2 935 aa8□□□□□ -1.13
SSXP1-201ENST00000453640 CENPCQ03188 943 aa7.99□□□□□ -1.13
SSXP1-201ENST00000453640 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
SSXP1-201ENST00000453640 ATP9BO43861 1147 aa7.98□□□□□ -1.13
SSXP1-201ENST00000453640 POU4F2Q12837 409 aa7.98□□□□□ -1.13
SSXP1-201ENST00000453640 EML3Q32P44 896 aa7.98□□□□□ -1.13
SSXP1-201ENST00000453640 SLC27A3Q5K4L6 730 aa7.98□□□□□ -1.13
SSXP1-201ENST00000453640 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
SSXP1-201ENST00000453640 USP17L3A6NCW0 530 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 USP17L4A6NCW7 530 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 VSIG8P0DPA2 414 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 GDF10P55107 478 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 USP17L2Q6R6M4 530 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 USP17L1Q7RTZ2 530 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
SSXP1-201ENST00000453640 NOD1Q9Y239 953 aa7.97□□□□□ -1.13
SSXP1-201ENST00000453640 TMEM229AB2RXF0 380 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 LZTS3O60299 673 aaPredicted RBP7.96□□□□□ -1.14
SSXP1-201ENST00000453640 GMPRP36959 345 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 GTF2IP78347 998 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
SSXP1-201ENST00000453640 NBPF15Q8N660 670 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 IRF7Q92985 503 aa7.96□□□□□ -1.14
SSXP1-201ENST00000453640 CALR3Q96L12 384 aaKnown RBP7.96□□□□□ -1.14
SSXP1-201ENST00000453640 INHAP05111 366 aa7.95□□□□□ -1.14
SSXP1-201ENST00000453640 ITGA6P23229 1130 aa7.95□□□□□ -1.14
SSXP1-201ENST00000453640 GPR161Q8N6U8 529 aaKnown RBP7.95□□□□□ -1.14
SSXP1-201ENST00000453640 CUEDC1Q9NWM3 386 aaPredicted RBP7.95□□□□□ -1.14
SSXP1-201ENST00000453640 TFIP11Q9UBB9 837 aaKnown RBP7.95□□□□□ -1.14
SSXP1-201ENST00000453640 WIPF1O43516 503 aa7.94□□□□□ -1.14
SSXP1-201ENST00000453640 ZSCAN10Q96SZ4 725 aaPredicted RBP7.94□□□□□ -1.14
SSXP1-201ENST00000453640 PALM3A6NDB9 673 aaPredicted RBP7.93□□□□□ -1.14
SSXP1-201ENST00000453640 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms