RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MEGF6O75095 1541 aa19.51■□□□□ 0.71
NCKIPSD-207ENST00000453349 FAM182BQ5T319 152 aa19.51■□□□□ 0.71
NCKIPSD-207ENST00000453349 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
NCKIPSD-207ENST00000453349 AEBP1Q8IUX7 1158 aa19.51■□□□□ 0.71
NCKIPSD-207ENST00000453349 LRRC37A3O60309 1634 aa19.51■□□□□ 0.71
NCKIPSD-207ENST00000453349 PLEKHO1Q53GL0 409 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-207ENST00000453349 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
NCKIPSD-207ENST00000453349 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-207ENST00000453349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
NCKIPSD-207ENST00000453349 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
NCKIPSD-207ENST00000453349 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
NCKIPSD-207ENST00000453349 KDRP35968 1356 aa19.49■□□□□ 0.71
NCKIPSD-207ENST00000453349 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
NCKIPSD-207ENST00000453349 FCHSD2O94868 740 aa19.48■□□□□ 0.71
NCKIPSD-207ENST00000453349 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
NCKIPSD-207ENST00000453349 PCDH11XQ9BZA7 1347 aa19.48■□□□□ 0.71
NCKIPSD-207ENST00000453349 PCDH11YQ9BZA8 1340 aa19.48■□□□□ 0.71
NCKIPSD-207ENST00000453349 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
NCKIPSD-207ENST00000453349 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
NCKIPSD-207ENST00000453349 NEFMP07197 916 aa19.45■□□□□ 0.7
NCKIPSD-207ENST00000453349 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
NCKIPSD-207ENST00000453349 PRKAR2BP31323 418 aa19.44■□□□□ 0.7
NCKIPSD-207ENST00000453349 RSPH6AQ9H0K4 717 aa19.44■□□□□ 0.7
NCKIPSD-207ENST00000453349 C1orf141Q5JVX7 400 aa19.43■□□□□ 0.7
NCKIPSD-207ENST00000453349 CCDC125Q86Z20 511 aa19.43■□□□□ 0.7
NCKIPSD-207ENST00000453349 MRS2Q9HD23 443 aa19.43■□□□□ 0.7
NCKIPSD-207ENST00000453349 CYP27B1O15528 508 aa19.42■□□□□ 0.7
NCKIPSD-207ENST00000453349 SF3B2Q13435 895 aaKnown RBP19.42■□□□□ 0.7
NCKIPSD-207ENST00000453349 ZNF530Q6P9A1 599 aaPredicted RBP19.42■□□□□ 0.7
NCKIPSD-207ENST00000453349 PHKG2P15735 406 aa19.41■□□□□ 0.7
NCKIPSD-207ENST00000453349 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
NCKIPSD-207ENST00000453349 UPF1Q92900 1129 aaKnown RBP eCLIP19.41■□□□□ 0.7
NCKIPSD-207ENST00000453349 PKD1L3Q7Z443 1732 aa19.41■□□□□ 0.7
NCKIPSD-207ENST00000453349 SOCS7O14512 581 aa19.4■□□□□ 0.7
NCKIPSD-207ENST00000453349 TRIM37O94972 964 aa19.4■□□□□ 0.7
NCKIPSD-207ENST00000453349 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
NCKIPSD-207ENST00000453349 MTHFSDQ2M296 383 aaKnown RBP19.4■□□□□ 0.7
NCKIPSD-207ENST00000453349 BCL9O00512 1426 aa19.4■□□□□ 0.7
NCKIPSD-207ENST00000453349 NKX1-1Q15270 411 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-207ENST00000453349 AKAP4Q5JQC9 854 aa19.39■□□□□ 0.69
NCKIPSD-207ENST00000453349 GAS2L2Q8NHY3 880 aa19.39■□□□□ 0.69
NCKIPSD-207ENST00000453349 ACSBG1Q96GR2 724 aa19.39■□□□□ 0.69
NCKIPSD-207ENST00000453349 ADAMTS8Q9UP79 889 aa19.39■□□□□ 0.69
NCKIPSD-207ENST00000453349 PHACTR3Q96KR7 559 aa19.38■□□□□ 0.69
NCKIPSD-207ENST00000453349 SHANK3Q9BYB0 1731 aa19.38■□□□□ 0.69
NCKIPSD-207ENST00000453349 MAPK8IP3Q9UPT6 1336 aa19.37■□□□□ 0.69
NCKIPSD-207ENST00000453349 BCL11BQ9C0K0 894 aaPredicted RBP19.37■□□□□ 0.69
NCKIPSD-207ENST00000453349 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
NCKIPSD-207ENST00000453349 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
NCKIPSD-207ENST00000453349 PLEKHF1Q96S99 279 aa19.36■□□□□ 0.69
NCKIPSD-207ENST00000453349 PRIM1P49642 420 aaKnown RBP19.35■□□□□ 0.69
NCKIPSD-207ENST00000453349 KCNQ2O43526 872 aa19.34■□□□□ 0.69
NCKIPSD-207ENST00000453349 APBA3O96018 575 aa19.34■□□□□ 0.69
NCKIPSD-207ENST00000453349 PNISRQ8TF01 805 aaKnown RBP19.34■□□□□ 0.69
NCKIPSD-207ENST00000453349 RUNDC1Q96C34 613 aa19.34■□□□□ 0.69
NCKIPSD-207ENST00000453349 GNAT3A8MTJ3 354 aa19.33■□□□□ 0.68
NCKIPSD-207ENST00000453349 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
NCKIPSD-207ENST00000453349 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
NCKIPSD-207ENST00000453349 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
NCKIPSD-207ENST00000453349 BAG6P46379 1132 aa19.32■□□□□ 0.68
NCKIPSD-207ENST00000453349 CCDC146Q8IYE0 955 aa19.32■□□□□ 0.68
NCKIPSD-207ENST00000453349 SBF2Q86WG5 1849 aa19.32■□□□□ 0.68
NCKIPSD-207ENST00000453349 MIER1Q8N108 512 aa19.31■□□□□ 0.68
NCKIPSD-207ENST00000453349 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
NCKIPSD-207ENST00000453349 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
NCKIPSD-207ENST00000453349 CABP4P57796 275 aa19.3■□□□□ 0.68
NCKIPSD-207ENST00000453349 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
NCKIPSD-207ENST00000453349 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
NCKIPSD-207ENST00000453349 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
NCKIPSD-207ENST00000453349 NFE2L2Q16236 605 aa19.29■□□□□ 0.68
NCKIPSD-207ENST00000453349 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
NCKIPSD-207ENST00000453349 LGR6Q9HBX8 967 aa19.29■□□□□ 0.68
NCKIPSD-207ENST00000453349 TMOD3Q9NYL9 352 aa19.29■□□□□ 0.68
NCKIPSD-207ENST00000453349 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
NCKIPSD-207ENST00000453349 NHSQ6T4R5 1651 aa19.28■□□□□ 0.68
NCKIPSD-207ENST00000453349 PLSCR1O15162 318 aa19.27■□□□□ 0.68
NCKIPSD-207ENST00000453349 RIPK4P57078 832 aa19.27■□□□□ 0.68
NCKIPSD-207ENST00000453349 TMPOP42166 694 aaKnown RBP19.26■□□□□ 0.67
NCKIPSD-207ENST00000453349 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
NCKIPSD-207ENST00000453349 DEFB132Q7Z7B7 95 aa19.26■□□□□ 0.67
NCKIPSD-207ENST00000453349 NFATC2IPQ8NCF5 419 aa19.26■□□□□ 0.67
NCKIPSD-207ENST00000453349 PIGBQ92521 554 aa19.26■□□□□ 0.67
NCKIPSD-207ENST00000453349 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
NCKIPSD-207ENST00000453349 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
NCKIPSD-207ENST00000453349 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
NCKIPSD-207ENST00000453349 SLC52A2Q9HAB3 445 aa19.25■□□□□ 0.67
NCKIPSD-207ENST00000453349 TNS1Q9HBL0 1735 aaKnown RBP19.25■□□□□ 0.67
NCKIPSD-207ENST00000453349 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
NCKIPSD-207ENST00000453349 TEFQ10587 303 aa19.24■□□□□ 0.67
NCKIPSD-207ENST00000453349 KAT6BQ8WYB5 2073 aa19.24■□□□□ 0.67
NCKIPSD-207ENST00000453349 TOGARAM1Q9Y4F4 1720 aa19.23■□□□□ 0.67
NCKIPSD-207ENST00000453349 APAF1O14727 1248 aa19.23■□□□□ 0.67
NCKIPSD-207ENST00000453349 EZH2Q15910 746 aaKnown RBP19.23■□□□□ 0.67
NCKIPSD-207ENST00000453349 MCM10Q7L590 875 aa19.23■□□□□ 0.67
NCKIPSD-207ENST00000453349 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
NCKIPSD-207ENST00000453349 SCN11AQ9UI33 1791 aa19.22■□□□□ 0.67
NCKIPSD-207ENST00000453349 CAMKK2Q96RR4 588 aa19.22■□□□□ 0.67
NCKIPSD-207ENST00000453349 RRP7AQ9Y3A4 280 aaKnown RBP19.22■□□□□ 0.67
NCKIPSD-207ENST00000453349 ITGB4P16144 1822 aa19.22■□□□□ 0.67
NCKIPSD-207ENST00000453349 BTAF1O14981 1849 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms