RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
LYSMD3-202ENST00000453259 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
LYSMD3-202ENST00000453259 NSD2O96028 1365 aa20.16■□□□□ 0.82
LYSMD3-202ENST00000453259 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
LYSMD3-202ENST00000453259 SYTL4Q96C24 671 aaPredicted RBP20.15■□□□□ 0.82
LYSMD3-202ENST00000453259 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
LYSMD3-202ENST00000453259 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 GRIN3BO60391 1043 aa20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 AMPHP49418 695 aa20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 TUBGCP6Q96RT7 1819 aa20.13■□□□□ 0.81
LYSMD3-202ENST00000453259 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
LYSMD3-202ENST00000453259 USP47Q96K76 1375 aa20.13■□□□□ 0.81
LYSMD3-202ENST00000453259 MEGF6O75095 1541 aa20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 LTV1Q96GA3 475 aaPredicted RBP20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 TESK2Q96S53 571 aa20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
LYSMD3-202ENST00000453259 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
LYSMD3-202ENST00000453259 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
LYSMD3-202ENST00000453259 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
LYSMD3-202ENST00000453259 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
LYSMD3-202ENST00000453259 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
LYSMD3-202ENST00000453259 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 CD2APQ9Y5K6 639 aa20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 INSRP06213 1382 aa20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 NSD3Q9BZ95 1437 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 ST20-MTHFSA0A0A6YYL1 179 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 C5P01031 1676 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 GOLGB1Q14789 3259 aaKnown RBP20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 RGPD2P0DJD1 1756 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 KCNQ4P56696 695 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 NBPF6Q5VWK0 638 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 NBPF4Q96M43 638 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 FLT4P35916 1363 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 FYB1O15117 783 aa20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 MSH5O43196 834 aa20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
LYSMD3-202ENST00000453259 TMF1P82094 1093 aa20.01■□□□□ 0.79
LYSMD3-202ENST00000453259 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.79
LYSMD3-202ENST00000453259 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
LYSMD3-202ENST00000453259 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
LYSMD3-202ENST00000453259 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 NCAPD2Q15021 1401 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 FBLN1P23142 703 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 PLEKHG2Q9H7P9 1386 aa19.96■□□□□ 0.79
LYSMD3-202ENST00000453259 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
LYSMD3-202ENST00000453259 ATP10DQ9P241 1426 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 USHBP1Q8N6Y0 703 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 AK7Q96M32 723 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 ADCY9O60503 1353 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 SSFA2P28290 1259 aa19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 NKX1-1Q15270 411 aaPredicted RBP19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 CYP27B1O15528 508 aa19.93■□□□□ 0.78
LYSMD3-202ENST00000453259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.93■□□□□ 0.78
LYSMD3-202ENST00000453259 GPBP1L1Q9HC44 474 aaPredicted RBP19.92■□□□□ 0.78
LYSMD3-202ENST00000453259 SPG7Q9UQ90 795 aa19.92■□□□□ 0.78
LYSMD3-202ENST00000453259 TOGARAM1Q9Y4F4 1720 aa19.92■□□□□ 0.78
LYSMD3-202ENST00000453259 ANKRD26Q9UPS8 1709 aa19.91■□□□□ 0.78
LYSMD3-202ENST00000453259 ITGB4P16144 1822 aa19.91■□□□□ 0.78
LYSMD3-202ENST00000453259 UBR3Q6ZT12 1888 aa19.91■□□□□ 0.78
LYSMD3-202ENST00000453259 CEP350Q5VT06 3117 aa19.89■□□□□ 0.78
LYSMD3-202ENST00000453259 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
LYSMD3-202ENST00000453259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.88■□□□□ 0.77
LYSMD3-202ENST00000453259 WASHC2AQ641Q2 1341 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 IGSF1Q8N6C5 1336 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 SIK1P57059 783 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 PIGBQ92521 554 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 MAP2P11137 1827 aaKnown RBP19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 CICQ96RK0 1608 aaPredicted RBP19.86■□□□□ 0.77
LYSMD3-202ENST00000453259 HSPA6P17066 643 aa19.85■□□□□ 0.77
LYSMD3-202ENST00000453259 TMOD3Q9NYL9 352 aa19.85■□□□□ 0.77
LYSMD3-202ENST00000453259 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
LYSMD3-202ENST00000453259 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
LYSMD3-202ENST00000453259 IFNL2Q8IZJ0 200 aa19.83■□□□□ 0.77
LYSMD3-202ENST00000453259 PHF14O94880 888 aa19.82■□□□□ 0.76
LYSMD3-202ENST00000453259 CARD14Q9BXL6 1004 aa19.82■□□□□ 0.76
LYSMD3-202ENST00000453259 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
LYSMD3-202ENST00000453259 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
LYSMD3-202ENST00000453259 GNPATO15228 680 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 PHKG2P15735 406 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 ADRA2BP18089 450 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 ATP6V1AP38606 617 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 TGFB2P61812 414 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 EYA1Q99502 592 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms