RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 VIMP08670 466 aaKnown RBP7.52□□□□□ -1.21
CPS1-204ENST00000451903 MMS22LQ6ZRQ5 1243 aa7.52□□□□□ -1.21
CPS1-204ENST00000451903 SPATA24Q86W54 205 aa7.52□□□□□ -1.21
CPS1-204ENST00000451903 RCAN3Q9UKA8 241 aa7.52□□□□□ -1.21
CPS1-204ENST00000451903 TRHP20396 242 aaPredicted RBP7.51□□□□□ -1.21
CPS1-204ENST00000451903 RANBP1P43487 201 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 ZFYVE27Q5T4F4 411 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 TAOK3Q9H2K8 898 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 ROCK1Q13464 1354 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 ZBTB22O15209 634 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 EIF5P55010 431 aaKnown RBP7.51□□□□□ -1.21
CPS1-204ENST00000451903 CCDC146Q8IYE0 955 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 SPC24Q8NBT2 197 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 DTNBP1Q96EV8 351 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 KTN1Q86UP2 1357 aaKnown RBP7.51□□□□□ -1.21
CPS1-204ENST00000451903 MARCH6O60337 910 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 PDCD7Q8N8D1 485 aaKnown RBP7.51□□□□□ -1.21
CPS1-204ENST00000451903 FAM76AQ8TAV0 307 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 ERLIN2O94905 339 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 ZSCAN26Q16670 478 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 CEP128Q6ZU80 1094 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 BTN2A1Q7KYR7 527 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 SAAL1Q96ER3 474 aa7.51□□□□□ -1.21
CPS1-204ENST00000451903 PAIP2BQ9ULR5 123 aaKnown RBP7.51□□□□□ -1.21
CPS1-204ENST00000451903 CIZ1Q9ULV3 898 aaPredicted RBP7.51□□□□□ -1.21
CPS1-204ENST00000451903 DYTNA2CJ06 578 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 IPO5O00410 1097 aaKnown RBP7.5□□□□□ -1.21
CPS1-204ENST00000451903 U2AF2P26368 475 aaKnown RBP eCLIP7.5□□□□□ -1.21
CPS1-204ENST00000451903 CCDC186Q7Z3E2 898 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 USP33Q8TEY7 942 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 DDX27Q96GQ7 796 aaKnown RBP7.5□□□□□ -1.21
CPS1-204ENST00000451903 CDK5RAP3Q96JB5 506 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 TRAIPQ9BWF2 469 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 SLC24A3Q9HC58 644 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 UTP6Q9NYH9 597 aaKnown RBP7.5□□□□□ -1.21
CPS1-204ENST00000451903 EBAG9O00559 213 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 CREB3O43889 395 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
CPS1-204ENST00000451903 VCAM1P19320 739 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 CEP112Q8N8E3 955 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 JMYQ8N9B5 988 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 ANKRD24Q8TF21 1146 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 NAP1L3Q99457 506 aaPredicted RBP7.5□□□□□ -1.21
CPS1-204ENST00000451903 ETAA1Q9NY74 926 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 UBAP1Q9NZ09 502 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 TMED1Q13445 227 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 NOL7Q9UMY1 257 aaKnown RBP7.5□□□□□ -1.21
CPS1-204ENST00000451903 PFDN1O60925 122 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 CAPN2P17655 700 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 ZNF365Q70YC5 407 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 PANK2Q9BZ23 570 aa7.5□□□□□ -1.21
CPS1-204ENST00000451903 CAND2O75155 1236 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 CCDC102AQ96A19 550 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 ZBED9Q6R2W3 1325 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 E2F4Q16254 413 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 SKIDA1Q1XH10 827 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 ACBD5Q5T8D3 534 aaPredicted RBP7.49□□□□□ -1.21
CPS1-204ENST00000451903 FAM212AQ96EL1 285 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 FMNL2Q96PY5 1086 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
CPS1-204ENST00000451903 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
CPS1-204ENST00000451903 STK26Q9P289 416 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 LIMCH1Q9UPQ0 1083 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 HSPA4P34932 840 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 IKQ13123 557 aaPredicted RBP7.49□□□□□ -1.21
CPS1-204ENST00000451903 GOLGA5Q8TBA6 731 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 KDM4CQ9H3R0 1056 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 ABCF2Q9UG63 623 aa7.49□□□□□ -1.21
CPS1-204ENST00000451903 PPFIA3O75145 1194 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 DNAJC8O75937 253 aaPredicted RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 SMC1AQ14683 1233 aaKnown RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 ERC2O15083 957 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 LONRF3Q496Y0 759 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 CCDC47Q96A33 483 aaKnown RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 KDM2AQ9Y2K7 1162 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 MAGEA9P43362 315 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 BECN2A8MW95 431 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 SMAPO00193 183 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 REC8O95072 547 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 ZFYP08048 801 aaPredicted RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPS1-204ENST00000451903 EP400NLQ6ZTU2 488 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 EFCAB13Q8IY85 973 aa7.48□□□□□ -1.21
CPS1-204ENST00000451903 RRP15Q9Y3B9 282 aaKnown RBP7.48□□□□□ -1.21
CPS1-204ENST00000451903 PRPHP41219 470 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 PSEN1P49768 467 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 OGFOD1Q8N543 542 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 ITGB1BP2Q9UKP3 347 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 C16orf87Q6PH81 154 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 ITPRIPQ8IWB1 547 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 PPFIBP2Q8ND30 876 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
CPS1-204ENST00000451903 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 PNMA2Q9UL42 364 aa7.47□□□□□ -1.21
CPS1-204ENST00000451903 UBE2Q1Q7Z7E8 422 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms