RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 NBPF6Q5VWK0 638 aa23.87■■□□□ 1.41
HOXD8-203ENST00000450510 NBPF4Q96M43 638 aa23.87■■□□□ 1.41
HOXD8-203ENST00000450510 CCDC27Q2M243 656 aa23.86■■□□□ 1.41
HOXD8-203ENST00000450510 DISP2A7MBM2 1401 aa23.85■■□□□ 1.41
HOXD8-203ENST00000450510 NCAPD2Q15021 1401 aa23.85■■□□□ 1.41
HOXD8-203ENST00000450510 U2AF1L5P0DN76 240 aaPredicted RBP23.85■■□□□ 1.41
HOXD8-203ENST00000450510 U2AF1Q01081 240 aaKnown RBP eCLIP23.85■■□□□ 1.41
HOXD8-203ENST00000450510 IL2RBP14784 551 aa23.83■■□□□ 1.41
HOXD8-203ENST00000450510 PELP1Q8IZL8 1130 aaKnown RBP23.83■■□□□ 1.41
HOXD8-203ENST00000450510 PARP4Q9UKK3 1724 aaKnown RBP23.82■■□□□ 1.4
HOXD8-203ENST00000450510 SENP3-EIF4A1A0A087X0R7 540 aa23.82■■□□□ 1.4
HOXD8-203ENST00000450510 IL13P35225 146 aa23.82■■□□□ 1.4
HOXD8-203ENST00000450510 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
HOXD8-203ENST00000450510 EYA1Q99502 592 aa23.82■■□□□ 1.4
HOXD8-203ENST00000450510 RCAN3Q9UKA8 241 aa23.82■■□□□ 1.4
HOXD8-203ENST00000450510 E9PSI1 815 aa23.81■■□□□ 1.4
HOXD8-203ENST00000450510 SLFN5Q08AF3 891 aa23.81■■□□□ 1.4
HOXD8-203ENST00000450510 WNK3Q9BYP7 1800 aa23.81■■□□□ 1.4
HOXD8-203ENST00000450510 IGSF1Q8N6C5 1336 aa23.81■■□□□ 1.4
HOXD8-203ENST00000450510 RGPD2P0DJD1 1756 aa23.8■■□□□ 1.4
HOXD8-203ENST00000450510 PLEKHG2Q9H7P9 1386 aa23.8■■□□□ 1.4
HOXD8-203ENST00000450510 TRMT2AQ8IZ69 625 aaKnown RBP23.8■■□□□ 1.4
HOXD8-203ENST00000450510 A0A0G2JS52 829 aa23.79■■□□□ 1.4
HOXD8-203ENST00000450510 MYT1Q01538 1121 aa23.79■■□□□ 1.4
HOXD8-203ENST00000450510 DDB1Q16531 1140 aa23.79■■□□□ 1.4
HOXD8-203ENST00000450510 DUSP27Q5VZP5 1158 aa23.79■■□□□ 1.4
HOXD8-203ENST00000450510 KRT27Q7Z3Y8 459 aa23.79■■□□□ 1.4
HOXD8-203ENST00000450510 U2SURPO15042 1029 aaKnown RBP23.78■■□□□ 1.4
HOXD8-203ENST00000450510 FCHSD2O94868 740 aa23.78■■□□□ 1.4
HOXD8-203ENST00000450510 WDR63Q8IWG1 891 aa23.78■■□□□ 1.4
HOXD8-203ENST00000450510 EXOC5O00471 708 aa23.77■■□□□ 1.4
HOXD8-203ENST00000450510 WWC1Q8IX03 1113 aa23.77■■□□□ 1.4
HOXD8-203ENST00000450510 PLEKHF1Q96S99 279 aa23.77■■□□□ 1.4
HOXD8-203ENST00000450510 BRWD3Q6RI45 1802 aa23.77■■□□□ 1.4
HOXD8-203ENST00000450510 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
HOXD8-203ENST00000450510 MAPK8IP3Q9UPT6 1336 aa23.76■■□□□ 1.39
HOXD8-203ENST00000450510 RGPD1P0DJD0 1748 aa23.75■■□□□ 1.39
HOXD8-203ENST00000450510 KDRP35968 1356 aa23.75■■□□□ 1.39
HOXD8-203ENST00000450510 RRP1P56182 461 aaKnown RBP23.74■■□□□ 1.39
HOXD8-203ENST00000450510 USHBP1Q8N6Y0 703 aa23.74■■□□□ 1.39
HOXD8-203ENST00000450510 PPP4R2Q9NY27 417 aa23.74■■□□□ 1.39
HOXD8-203ENST00000450510 LRRC37A3O60309 1634 aa23.73■■□□□ 1.39
HOXD8-203ENST00000450510 NEFMP07197 916 aa23.73■■□□□ 1.39
HOXD8-203ENST00000450510 TATP17735 454 aaPredicted RBP23.73■■□□□ 1.39
HOXD8-203ENST00000450510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.73■■□□□ 1.39
HOXD8-203ENST00000450510 OVOS2A0A0G2JMS6 1433 aa23.73■■□□□ 1.39
HOXD8-203ENST00000450510 TNS2Q63HR2 1409 aa23.73■■□□□ 1.39
HOXD8-203ENST00000450510 MEGF6O75095 1541 aa23.72■■□□□ 1.39
HOXD8-203ENST00000450510 BCL9O00512 1426 aa23.71■■□□□ 1.39
HOXD8-203ENST00000450510 FAM196AQ6ZSG2 479 aa23.7■■□□□ 1.38
HOXD8-203ENST00000450510 ZCRB1Q8TBF4 217 aaKnown RBP23.7■■□□□ 1.38
HOXD8-203ENST00000450510 SULT6B1Q6IMI4 303 aa23.69■■□□□ 1.38
HOXD8-203ENST00000450510 RSPH6AQ9H0K4 717 aa23.69■■□□□ 1.38
HOXD8-203ENST00000450510 TMPOP42166 694 aaKnown RBP23.68■■□□□ 1.38
HOXD8-203ENST00000450510 IL16Q14005 1332 aa23.67■■□□□ 1.38
HOXD8-203ENST00000450510 IRX6P78412 446 aaPredicted RBP23.67■■□□□ 1.38
HOXD8-203ENST00000450510 MARCH10Q8NA82 808 aaPredicted RBP23.67■■□□□ 1.38
HOXD8-203ENST00000450510 MYH16Q9H6N6 1097 aa23.66■■□□□ 1.38
HOXD8-203ENST00000450510 SPG7Q9UQ90 795 aa23.66■■□□□ 1.38
HOXD8-203ENST00000450510 AMOTQ4VCS5 1084 aa23.65■■□□□ 1.38
HOXD8-203ENST00000450510 CCDC125Q86Z20 511 aa23.65■■□□□ 1.38
HOXD8-203ENST00000450510 AEBP1Q8IUX7 1158 aa23.65■■□□□ 1.38
HOXD8-203ENST00000450510 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.64■■□□□ 1.37
HOXD8-203ENST00000450510 RRP7AQ9Y3A4 280 aaKnown RBP23.64■■□□□ 1.37
HOXD8-203ENST00000450510 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.37
HOXD8-203ENST00000450510 PCDH11XQ9BZA7 1347 aa23.63■■□□□ 1.37
HOXD8-203ENST00000450510 PCDH11YQ9BZA8 1340 aa23.63■■□□□ 1.37
HOXD8-203ENST00000450510 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
HOXD8-203ENST00000450510 PLEKHO1Q53GL0 409 aaPredicted RBP23.63■■□□□ 1.37
HOXD8-203ENST00000450510 NEUROD2Q15784 382 aa23.62■■□□□ 1.37
HOXD8-203ENST00000450510 SPINK5Q9NQ38 1064 aaPredicted RBP23.62■■□□□ 1.37
HOXD8-203ENST00000450510 HMOX1P09601 288 aa23.61■■□□□ 1.37
HOXD8-203ENST00000450510 CT47B1P0C2W7 299 aaPredicted RBP23.61■■□□□ 1.37
HOXD8-203ENST00000450510 SHANK3Q9BYB0 1731 aa23.6■■□□□ 1.37
HOXD8-203ENST00000450510 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
HOXD8-203ENST00000450510 UPF1Q92900 1129 aaKnown RBP eCLIP23.6■■□□□ 1.37
HOXD8-203ENST00000450510 EP400Q96L91 3159 aa23.6■■□□□ 1.37
HOXD8-203ENST00000450510 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
HOXD8-203ENST00000450510 LMOD3Q0VAK6 560 aa23.59■■□□□ 1.37
HOXD8-203ENST00000450510 NKX1-1Q15270 411 aaPredicted RBP23.59■■□□□ 1.37
HOXD8-203ENST00000450510 NFE2L2Q16236 605 aa23.59■■□□□ 1.37
HOXD8-203ENST00000450510 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
HOXD8-203ENST00000450510 CYP27B1O15528 508 aa23.58■■□□□ 1.37
HOXD8-203ENST00000450510 RIPK4P57078 832 aa23.58■■□□□ 1.37
HOXD8-203ENST00000450510 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.37
HOXD8-203ENST00000450510 TRIM35Q9UPQ4 493 aa23.58■■□□□ 1.37
HOXD8-203ENST00000450510 PHKG2P15735 406 aa23.55■■□□□ 1.36
HOXD8-203ENST00000450510 HSP90AB1P08238 724 aaKnown RBP23.54■■□□□ 1.36
HOXD8-203ENST00000450510 BCL11BQ9C0K0 894 aaPredicted RBP23.53■■□□□ 1.36
HOXD8-203ENST00000450510 SBF2Q86WG5 1849 aa23.53■■□□□ 1.36
HOXD8-203ENST00000450510 TRIM37O94972 964 aa23.51■■□□□ 1.35
HOXD8-203ENST00000450510 SF3B2Q13435 895 aaKnown RBP23.51■■□□□ 1.35
HOXD8-203ENST00000450510 AKAP4Q5JQC9 854 aa23.51■■□□□ 1.35
HOXD8-203ENST00000450510 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
HOXD8-203ENST00000450510 GAS2L2Q8NHY3 880 aa23.51■■□□□ 1.35
HOXD8-203ENST00000450510 MTHFSDQ2M296 383 aaKnown RBP23.5■■□□□ 1.35
HOXD8-203ENST00000450510 C1orf141Q5JVX7 400 aa23.5■■□□□ 1.35
HOXD8-203ENST00000450510 DCAF5Q96JK2 942 aa23.5■■□□□ 1.35
HOXD8-203ENST00000450510 PHACTR3Q96KR7 559 aa23.49■■□□□ 1.35
HOXD8-203ENST00000450510 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms