RNA–Protein interactions for RNA: ENST00000449641.6

RFC5-203, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-203ENST00000449641 EYA1Q99502 592 aa8.88□□□□□ -0.99
RFC5-203ENST00000449641 CSB-PGBD3P0DP91 1061 aa8.87□□□□□ -0.99
RFC5-203ENST00000449641 PPP2R1AP30153 589 aa8.87□□□□□ -0.99
RFC5-203ENST00000449641 IL13P35225 146 aa8.87□□□□□ -0.99
RFC5-203ENST00000449641 KRT27Q7Z3Y8 459 aa8.87□□□□□ -0.99
RFC5-203ENST00000449641 NLRP2Q9NX02 1062 aa8.87□□□□□ -0.99
RFC5-203ENST00000449641 USP35Q9P2H5 1018 aa8.87□□□□□ -0.99
RFC5-203ENST00000449641 TNS1Q9HBL0 1735 aaKnown RBP8.87□□□□□ -0.99
RFC5-203ENST00000449641 IL2RBP14784 551 aa8.86□□□□□ -0.99
RFC5-203ENST00000449641 UPF1Q92900 1129 aaKnown RBP eCLIP8.86□□□□□ -0.99
RFC5-203ENST00000449641 LTV1Q96GA3 475 aaPredicted RBP8.86□□□□□ -0.99
RFC5-203ENST00000449641 DDB1Q16531 1140 aa8.85□□□□□ -0.99
RFC5-203ENST00000449641 MARCH10Q8NA82 808 aaPredicted RBP8.85□□□□□ -0.99
RFC5-203ENST00000449641 PPM1GO15355 546 aaPredicted RBP8.84□□□□□ -0.99
RFC5-203ENST00000449641 USHBP1Q8N6Y0 703 aa8.84□□□□□ -0.99
RFC5-203ENST00000449641 NHSQ6T4R5 1651 aa8.84□□□□□ -0.99
RFC5-203ENST00000449641 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
RFC5-203ENST00000449641 PDE3BQ13370 1112 aa8.83□□□□□ -1
RFC5-203ENST00000449641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.83□□□□□ -1
RFC5-203ENST00000449641 ADAMTS7Q9UKP4 1686 aa8.83□□□□□ -1
RFC5-203ENST00000449641 RGPD3A6NKT7 1758 aaPredicted RBP8.83□□□□□ -1
RFC5-203ENST00000449641 RGPD4Q7Z3J3 1758 aa8.83□□□□□ -1
RFC5-203ENST00000449641 EXOC5O00471 708 aa8.82□□□□□ -1
RFC5-203ENST00000449641 DIAPH1O60610 1272 aaKnown RBP8.82□□□□□ -1
RFC5-203ENST00000449641 FAM182BQ5T319 152 aa8.82□□□□□ -1
RFC5-203ENST00000449641 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
RFC5-203ENST00000449641 AEBP1Q8IUX7 1158 aa8.82□□□□□ -1
RFC5-203ENST00000449641 DOT1LQ8TEK3 1739 aa8.81□□□□□ -1
RFC5-203ENST00000449641 CYP27B1O15528 508 aa8.81□□□□□ -1
RFC5-203ENST00000449641 FKBP8Q14318 412 aa8.81□□□□□ -1
RFC5-203ENST00000449641 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
RFC5-203ENST00000449641 CCDC125Q86Z20 511 aa8.81□□□□□ -1
RFC5-203ENST00000449641 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
RFC5-203ENST00000449641 A0A0G2JS52 829 aa8.8□□□□□ -1
RFC5-203ENST00000449641 TATP17735 454 aaPredicted RBP8.8□□□□□ -1
RFC5-203ENST00000449641 NGEFQ8N5V2 710 aa8.8□□□□□ -1
RFC5-203ENST00000449641 RAPGEF4Q8WZA2 1011 aa8.8□□□□□ -1
RFC5-203ENST00000449641 RREB1Q92766 1687 aa8.8□□□□□ -1
RFC5-203ENST00000449641 ITGB4P16144 1822 aa8.8□□□□□ -1
RFC5-203ENST00000449641 VIRMAQ69YN4 1812 aaKnown RBP8.8□□□□□ -1
RFC5-203ENST00000449641 CNGB1Q14028 1251 aaPredicted RBP8.79□□□□□ -1
RFC5-203ENST00000449641 SULT6B1Q6IMI4 303 aa8.79□□□□□ -1
RFC5-203ENST00000449641 PTF1AQ7RTS3 328 aa8.79□□□□□ -1
RFC5-203ENST00000449641 PNISRQ8TF01 805 aaKnown RBP8.79□□□□□ -1
RFC5-203ENST00000449641 RSPH6AQ9H0K4 717 aa8.79□□□□□ -1
RFC5-203ENST00000449641 NUDCQ9Y266 331 aa8.79□□□□□ -1
RFC5-203ENST00000449641 BTAF1O14981 1849 aa8.79□□□□□ -1
RFC5-203ENST00000449641 PCDH11XQ9BZA7 1347 aa8.79□□□□□ -1
RFC5-203ENST00000449641 PCDH11YQ9BZA8 1340 aa8.79□□□□□ -1
RFC5-203ENST00000449641 SCN11AQ9UI33 1791 aa8.78□□□□□ -1
RFC5-203ENST00000449641 LY75O60449 1722 aa8.78□□□□□ -1
RFC5-203ENST00000449641 FAM9BQ8IZU0 186 aa8.78□□□□□ -1
RFC5-203ENST00000449641 CFAP53Q96M91 514 aa8.78□□□□□ -1
RFC5-203ENST00000449641 KDM6AO15550 1401 aaPredicted RBP8.78□□□□□ -1
RFC5-203ENST00000449641 RNF123Q5XPI4 1314 aa8.78□□□□□ -1
RFC5-203ENST00000449641 TRIM37O94972 964 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 PHKG2P15735 406 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 AMOTQ4VCS5 1084 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 BCL11BQ9C0K0 894 aaPredicted RBP8.77□□□□□ -1.01
RFC5-203ENST00000449641 PPP4R2Q9NY27 417 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 SPG7Q9UQ90 795 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 NUP188Q5SRE5 1749 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 MRC1P22897 1456 aa8.77□□□□□ -1.01
RFC5-203ENST00000449641 PLSCR1O15162 318 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 KCNQ2O43526 872 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 FCHSD2O94868 740 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 HMOX1P09601 288 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 DDX54Q8TDD1 881 aaKnown RBP8.76□□□□□ -1.01
RFC5-203ENST00000449641 CAMKK2Q96RR4 588 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 PLEKHF1Q96S99 279 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 PAPPAQ13219 1627 aa8.76□□□□□ -1.01
RFC5-203ENST00000449641 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
RFC5-203ENST00000449641 MTHFSDQ2M296 383 aaKnown RBP8.75□□□□□ -1.01
RFC5-203ENST00000449641 CCDC184Q52MB2 194 aa8.75□□□□□ -1.01
RFC5-203ENST00000449641 PLEKHO1Q53GL0 409 aaPredicted RBP8.75□□□□□ -1.01
RFC5-203ENST00000449641 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
RFC5-203ENST00000449641 DLG5Q8TDM6 1919 aa8.75□□□□□ -1.01
RFC5-203ENST00000449641 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
RFC5-203ENST00000449641 CICQ96RK0 1608 aaPredicted RBP8.74□□□□□ -1.01
RFC5-203ENST00000449641 U2SURPO15042 1029 aaKnown RBP8.74□□□□□ -1.01
RFC5-203ENST00000449641 PPP4R3CPQ6ZMV5 832 aa8.74□□□□□ -1.01
RFC5-203ENST00000449641 PROM2Q8N271 834 aa8.74□□□□□ -1.01
RFC5-203ENST00000449641 PHACTR3Q96KR7 559 aa8.74□□□□□ -1.01
RFC5-203ENST00000449641 U2AF1L5P0DN76 240 aaPredicted RBP8.73□□□□□ -1.01
RFC5-203ENST00000449641 PRKAR2BP31323 418 aa8.73□□□□□ -1.01
RFC5-203ENST00000449641 BAG6P46379 1132 aa8.73□□□□□ -1.01
RFC5-203ENST00000449641 U2AF1Q01081 240 aaKnown RBP eCLIP8.73□□□□□ -1.01
RFC5-203ENST00000449641 AKAP4Q5JQC9 854 aa8.73□□□□□ -1.01
RFC5-203ENST00000449641 ZNF530Q6P9A1 599 aaPredicted RBP8.73□□□□□ -1.01
RFC5-203ENST00000449641 ACSBG1Q96GR2 724 aa8.73□□□□□ -1.01
RFC5-203ENST00000449641 CEMIPQ8WUJ3 1361 aa8.73□□□□□ -1.01
RFC5-203ENST00000449641 UBR2Q8IWV8 1755 aa8.72□□□□□ -1.01
RFC5-203ENST00000449641 ERVV-2B6SEH9 535 aa8.72□□□□□ -1.01
RFC5-203ENST00000449641 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
RFC5-203ENST00000449641 KCNA4P22459 653 aa8.72□□□□□ -1.01
RFC5-203ENST00000449641 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
RFC5-203ENST00000449641 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
RFC5-203ENST00000449641 DCAF5Q96JK2 942 aa8.72□□□□□ -1.01
RFC5-203ENST00000449641 KAT6BQ8WYB5 2073 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms