RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 CFAP44Q96MT7 982 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 USP6P35125 1406 aa16.65■□□□□ 0.26
SYNGAP1-204ENST00000449372 NEUROD2Q15784 382 aa16.64■□□□□ 0.26
SYNGAP1-204ENST00000449372 HS1BP3Q53T59 392 aa16.64■□□□□ 0.26
SYNGAP1-204ENST00000449372 EID1Q9Y6B2 187 aa16.64■□□□□ 0.26
SYNGAP1-204ENST00000449372 FMN2Q9NZ56 1722 aa16.64■□□□□ 0.25
SYNGAP1-204ENST00000449372 GBP4Q96PP9 640 aa16.64■□□□□ 0.25
SYNGAP1-204ENST00000449372 DLG5Q8TDM6 1919 aa16.64■□□□□ 0.25
SYNGAP1-204ENST00000449372 RARSP54136 660 aaKnown RBP16.64■□□□□ 0.25
SYNGAP1-204ENST00000449372 THEMISQ8N1K5 641 aaPredicted RBP16.64■□□□□ 0.25
SYNGAP1-204ENST00000449372 IL13P35225 146 aa16.64■□□□□ 0.25
SYNGAP1-204ENST00000449372 FCHSD2O94868 740 aa16.63■□□□□ 0.25
SYNGAP1-204ENST00000449372 AMOTL2Q9Y2J4 779 aa16.63■□□□□ 0.25
SYNGAP1-204ENST00000449372 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
SYNGAP1-204ENST00000449372 IL16Q14005 1332 aa16.62■□□□□ 0.25
SYNGAP1-204ENST00000449372 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
SYNGAP1-204ENST00000449372 PIK3R4Q99570 1358 aa16.62■□□□□ 0.25
SYNGAP1-204ENST00000449372 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
SYNGAP1-204ENST00000449372 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
SYNGAP1-204ENST00000449372 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
SYNGAP1-204ENST00000449372 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-204ENST00000449372 ACEP12821 1306 aa16.61■□□□□ 0.25
SYNGAP1-204ENST00000449372 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
SYNGAP1-204ENST00000449372 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-204ENST00000449372 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-204ENST00000449372 TTC21BQ7Z4L5 1316 aa16.6■□□□□ 0.25
SYNGAP1-204ENST00000449372 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
SYNGAP1-204ENST00000449372 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-204ENST00000449372 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
SYNGAP1-204ENST00000449372 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
SYNGAP1-204ENST00000449372 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
SYNGAP1-204ENST00000449372 PANK1Q8TE04 598 aa16.58■□□□□ 0.25
SYNGAP1-204ENST00000449372 ZKSCAN5Q9Y2L8 839 aa16.58■□□□□ 0.24
SYNGAP1-204ENST00000449372 COG3Q96JB2 828 aa16.57■□□□□ 0.24
SYNGAP1-204ENST00000449372 ANKARQ7Z5J8 1434 aa16.57■□□□□ 0.24
SYNGAP1-204ENST00000449372 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
SYNGAP1-204ENST00000449372 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
SYNGAP1-204ENST00000449372 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-204ENST00000449372 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
SYNGAP1-204ENST00000449372 CGNQ9P2M7 1197 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-204ENST00000449372 ZBTB22O15209 634 aa16.55■□□□□ 0.24
SYNGAP1-204ENST00000449372 MFAP1P55081 439 aaKnown RBP16.55■□□□□ 0.24
SYNGAP1-204ENST00000449372 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
SYNGAP1-204ENST00000449372 SETD1BQ9UPS6 1966 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-204ENST00000449372 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-204ENST00000449372 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-204ENST00000449372 MCM5P33992 734 aa16.54■□□□□ 0.24
SYNGAP1-204ENST00000449372 DDIT3P35638 169 aa16.54■□□□□ 0.24
SYNGAP1-204ENST00000449372 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-204ENST00000449372 RLBP1P12271 317 aa16.53■□□□□ 0.24
SYNGAP1-204ENST00000449372 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
SYNGAP1-204ENST00000449372 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
SYNGAP1-204ENST00000449372 DDX49Q9Y6V7 483 aaKnown RBP16.53■□□□□ 0.24
SYNGAP1-204ENST00000449372 KCNA6P17658 529 aa16.52■□□□□ 0.24
SYNGAP1-204ENST00000449372 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
SYNGAP1-204ENST00000449372 TNNQ9UQP3 1299 aa16.52■□□□□ 0.24
SYNGAP1-204ENST00000449372 KIF16BQ96L93 1317 aa16.52■□□□□ 0.24
SYNGAP1-204ENST00000449372 NFE2L2Q16236 605 aa16.52■□□□□ 0.23
SYNGAP1-204ENST00000449372 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.23
SYNGAP1-204ENST00000449372 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.23
SYNGAP1-204ENST00000449372 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.23
SYNGAP1-204ENST00000449372 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-204ENST00000449372 PDLIM2Q96JY6 352 aa16.51■□□□□ 0.23
SYNGAP1-204ENST00000449372 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-204ENST00000449372 TSC1Q92574 1164 aa16.51■□□□□ 0.23
SYNGAP1-204ENST00000449372 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
SYNGAP1-204ENST00000449372 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
SYNGAP1-204ENST00000449372 IGSF3O75054 1194 aa16.5■□□□□ 0.23
SYNGAP1-204ENST00000449372 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
SYNGAP1-204ENST00000449372 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
SYNGAP1-204ENST00000449372 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
SYNGAP1-204ENST00000449372 HMOX1P09601 288 aa16.5■□□□□ 0.23
SYNGAP1-204ENST00000449372 KLHL40Q2TBA0 621 aa16.5■□□□□ 0.23
SYNGAP1-204ENST00000449372 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
SYNGAP1-204ENST00000449372 EIF4A2Q14240 407 aaKnown RBP16.49■□□□□ 0.23
SYNGAP1-204ENST00000449372 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
SYNGAP1-204ENST00000449372 NUTM2FA1L443 756 aa16.49■□□□□ 0.23
SYNGAP1-204ENST00000449372 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
SYNGAP1-204ENST00000449372 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
SYNGAP1-204ENST00000449372 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
SYNGAP1-204ENST00000449372 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
SYNGAP1-204ENST00000449372 SMC5Q8IY18 1101 aa16.48■□□□□ 0.23
SYNGAP1-204ENST00000449372 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-204ENST00000449372 ITPRIPQ8IWB1 547 aa16.48■□□□□ 0.23
SYNGAP1-204ENST00000449372 CCDC39Q9UFE4 941 aa16.48■□□□□ 0.23
SYNGAP1-204ENST00000449372 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
SYNGAP1-204ENST00000449372 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
SYNGAP1-204ENST00000449372 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
SYNGAP1-204ENST00000449372 BCL2L13Q9BXK5 485 aa16.47■□□□□ 0.23
SYNGAP1-204ENST00000449372 ZNF445P59923 1031 aa16.47■□□□□ 0.23
SYNGAP1-204ENST00000449372 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
SYNGAP1-204ENST00000449372 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
SYNGAP1-204ENST00000449372 SSH1Q8WYL5 1049 aa16.46■□□□□ 0.23
SYNGAP1-204ENST00000449372 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms