RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ALDH1L2Q3SY69 923 aa20.56■□□□□ 0.88
AP000253.1-201ENST00000449339 ATF7IPQ6VMQ6 1270 aa20.56■□□□□ 0.88
AP000253.1-201ENST00000449339 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
AP000253.1-201ENST00000449339 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
AP000253.1-201ENST00000449339 PCDHB15Q9Y5E8 787 aa20.55■□□□□ 0.88
AP000253.1-201ENST00000449339 USP19O94966 1318 aa20.55■□□□□ 0.88
AP000253.1-201ENST00000449339 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
AP000253.1-201ENST00000449339 RGS3P49796 1198 aa20.55■□□□□ 0.88
AP000253.1-201ENST00000449339 ALS2Q96Q42 1657 aa20.55■□□□□ 0.88
AP000253.1-201ENST00000449339 NBPF6Q5VWK0 638 aa20.54■□□□□ 0.88
AP000253.1-201ENST00000449339 ARHGEF25Q86VW2 580 aa20.54■□□□□ 0.88
AP000253.1-201ENST00000449339 NBPF4Q96M43 638 aa20.54■□□□□ 0.88
AP000253.1-201ENST00000449339 LRRC59Q96AG4 307 aaKnown RBP20.53■□□□□ 0.88
AP000253.1-201ENST00000449339 PHRF1Q9P1Y6 1649 aaKnown RBP20.53■□□□□ 0.88
AP000253.1-201ENST00000449339 CRB1P82279 1406 aa20.53■□□□□ 0.88
AP000253.1-201ENST00000449339 TWISTNBQ3B726 338 aaPredicted RBP20.53■□□□□ 0.88
AP000253.1-201ENST00000449339 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
AP000253.1-201ENST00000449339 IPO9Q96P70 1041 aaKnown RBP20.53■□□□□ 0.88
AP000253.1-201ENST00000449339 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
AP000253.1-201ENST00000449339 KRT24Q2M2I5 525 aa20.52■□□□□ 0.88
AP000253.1-201ENST00000449339 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
AP000253.1-201ENST00000449339 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.88
AP000253.1-201ENST00000449339 MED1Q15648 1581 aaPredicted RBP20.52■□□□□ 0.88
AP000253.1-201ENST00000449339 CHL1O00533 1208 aa20.51■□□□□ 0.87
AP000253.1-201ENST00000449339 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
AP000253.1-201ENST00000449339 RTF1Q92541 710 aaKnown RBP20.51■□□□□ 0.87
AP000253.1-201ENST00000449339 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
AP000253.1-201ENST00000449339 DDX19BQ9UMR2 479 aa20.5■□□□□ 0.87
AP000253.1-201ENST00000449339 ZC3H6P61129 1189 aaKnown RBP20.5■□□□□ 0.87
AP000253.1-201ENST00000449339 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
AP000253.1-201ENST00000449339 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
AP000253.1-201ENST00000449339 AXIN2Q9Y2T1 843 aa20.5■□□□□ 0.87
AP000253.1-201ENST00000449339 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
AP000253.1-201ENST00000449339 RGPD5Q99666 1765 aa20.49■□□□□ 0.87
AP000253.1-201ENST00000449339 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
AP000253.1-201ENST00000449339 NPHP3Q7Z494 1330 aa20.48■□□□□ 0.87
AP000253.1-201ENST00000449339 CABLES1Q8TDN4 633 aa20.48■□□□□ 0.87
AP000253.1-201ENST00000449339 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
AP000253.1-201ENST00000449339 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
AP000253.1-201ENST00000449339 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
AP000253.1-201ENST00000449339 C8orf34Q49A92 452 aa20.47■□□□□ 0.87
AP000253.1-201ENST00000449339 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
AP000253.1-201ENST00000449339 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
AP000253.1-201ENST00000449339 PXDNQ92626 1479 aa20.46■□□□□ 0.87
AP000253.1-201ENST00000449339 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
AP000253.1-201ENST00000449339 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
AP000253.1-201ENST00000449339 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
AP000253.1-201ENST00000449339 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
AP000253.1-201ENST00000449339 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
AP000253.1-201ENST00000449339 HTATSF1O43719 755 aaKnown RBP20.43■□□□□ 0.86
AP000253.1-201ENST00000449339 ARHGAP45Q92619 1136 aa20.43■□□□□ 0.86
AP000253.1-201ENST00000449339 SPATA31A3Q5VYP0 1347 aa20.42■□□□□ 0.86
AP000253.1-201ENST00000449339 ZBTB40Q9NUA8 1239 aa20.42■□□□□ 0.86
AP000253.1-201ENST00000449339 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
AP000253.1-201ENST00000449339 ZBTB47Q9UFB7 747 aaPredicted RBP20.42■□□□□ 0.86
AP000253.1-201ENST00000449339 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
AP000253.1-201ENST00000449339 HDAC1Q13547 482 aaPredicted RBP20.4■□□□□ 0.86
AP000253.1-201ENST00000449339 PDZRN3Q9UPQ7 1066 aa20.4■□□□□ 0.86
AP000253.1-201ENST00000449339 CHRNA2Q15822 529 aa20.39■□□□□ 0.85
AP000253.1-201ENST00000449339 ERBB3P21860 1342 aa20.39■□□□□ 0.85
AP000253.1-201ENST00000449339 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.85
AP000253.1-201ENST00000449339 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
AP000253.1-201ENST00000449339 LGR6Q9HBX8 967 aa20.38■□□□□ 0.85
AP000253.1-201ENST00000449339 CAMTA1Q9Y6Y1 1673 aa20.37■□□□□ 0.85
AP000253.1-201ENST00000449339 ZNF530Q6P9A1 599 aaPredicted RBP20.37■□□□□ 0.85
AP000253.1-201ENST00000449339 COL18A1P39060 1754 aa20.37■□□□□ 0.85
AP000253.1-201ENST00000449339 HAP1P54257 671 aaPredicted RBP20.36■□□□□ 0.85
AP000253.1-201ENST00000449339 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
AP000253.1-201ENST00000449339 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
AP000253.1-201ENST00000449339 ABCC4O15439 1325 aa20.35■□□□□ 0.85
AP000253.1-201ENST00000449339 NLRP2Q9NX02 1062 aa20.34■□□□□ 0.85
AP000253.1-201ENST00000449339 LMO7Q8WWI1 1683 aa20.34■□□□□ 0.85
AP000253.1-201ENST00000449339 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
AP000253.1-201ENST00000449339 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
AP000253.1-201ENST00000449339 CHMP4BQ9H444 224 aaKnown RBP20.34■□□□□ 0.85
AP000253.1-201ENST00000449339 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
AP000253.1-201ENST00000449339 API5Q9BZZ5 524 aaKnown RBP20.33■□□□□ 0.85
AP000253.1-201ENST00000449339 SOS2Q07890 1332 aaPredicted RBP20.33■□□□□ 0.84
AP000253.1-201ENST00000449339 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
AP000253.1-201ENST00000449339 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
AP000253.1-201ENST00000449339 SMC5Q8IY18 1101 aa20.32■□□□□ 0.84
AP000253.1-201ENST00000449339 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
AP000253.1-201ENST00000449339 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
AP000253.1-201ENST00000449339 RGS12O14924 1447 aa20.31■□□□□ 0.84
AP000253.1-201ENST00000449339 CSB-PGBD3P0DP91 1061 aa20.31■□□□□ 0.84
AP000253.1-201ENST00000449339 NECTIN2Q92692 538 aa20.31■□□□□ 0.84
AP000253.1-201ENST00000449339 DDRGK1Q96HY6 314 aa20.31■□□□□ 0.84
AP000253.1-201ENST00000449339 G2E3Q7L622 706 aa20.3■□□□□ 0.84
AP000253.1-201ENST00000449339 C1orf115Q9H7X2 142 aa20.3■□□□□ 0.84
AP000253.1-201ENST00000449339 FAM208AQ9UK61 1670 aaKnown RBP20.3■□□□□ 0.84
AP000253.1-201ENST00000449339 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
AP000253.1-201ENST00000449339 KCNQ3O43525 872 aa20.28■□□□□ 0.84
AP000253.1-201ENST00000449339 CPDO75976 1380 aa20.28■□□□□ 0.84
AP000253.1-201ENST00000449339 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.84
AP000253.1-201ENST00000449339 BABAM1Q9NWV8 329 aa20.27■□□□□ 0.84
AP000253.1-201ENST00000449339 TEFQ10587 303 aa20.26■□□□□ 0.83
AP000253.1-201ENST00000449339 RAPGEF4Q8WZA2 1011 aa20.26■□□□□ 0.83
AP000253.1-201ENST00000449339 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
AP000253.1-201ENST00000449339 MEGF6O75095 1541 aa20.26■□□□□ 0.83
AP000253.1-201ENST00000449339 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms