RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
TRIM4-204ENST00000447480 NPHP3Q7Z494 1330 aa9.77□□□□□ -0.85
TRIM4-204ENST00000447480 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 BLMP54132 1417 aaPredicted RBP9.76□□□□□ -0.85
TRIM4-204ENST00000447480 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 FOXK1P85037 733 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
TRIM4-204ENST00000447480 TESK2Q96S53 571 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 ISY1Q9ULR0 285 aaKnown RBP9.76□□□□□ -0.85
TRIM4-204ENST00000447480 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 MST1RQ04912 1400 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 C1orf167Q5SNV9 1468 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
TRIM4-204ENST00000447480 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 KDM2BQ8NHM5 1336 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 BECN1Q14457 450 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 ESCO1Q5FWF5 840 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
TRIM4-204ENST00000447480 RGPD8O14715 1765 aaPredicted RBP9.73□□□□□ -0.85
TRIM4-204ENST00000447480 ANKRD36BQ8N2N9 1353 aa9.73□□□□□ -0.85
TRIM4-204ENST00000447480 AKAP12Q02952 1782 aa9.73□□□□□ -0.85
TRIM4-204ENST00000447480 NHSL1Q5SYE7 1610 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 AHDC1Q5TGY3 1603 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 HOXB1P14653 301 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 EMP3P54852 163 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ARSIQ5FYB1 569 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 GPR153Q6NV75 609 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRIM4-204ENST00000447480 POLR3GLQ9BT43 218 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 MAPK8IP3Q9UPT6 1336 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 NSD2O96028 1365 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 NPC1L1Q9UHC9 1359 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 USP32Q8NFA0 1604 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 SLC34A2O95436 690 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 NPM2Q86SE8 214 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 FBXO41Q8TF61 875 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 LRRC59Q96AG4 307 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 SBNO1A3KN83 1393 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 DISP3Q9P2K9 1392 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 BRINP3Q76B58 766 aa9.69□□□□□ -0.86
TRIM4-204ENST00000447480 FRAT1Q92837 279 aaPredicted RBP9.69□□□□□ -0.86
TRIM4-204ENST00000447480 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
TRIM4-204ENST00000447480 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
TRIM4-204ENST00000447480 LAS1LQ9Y4W2 734 aaKnown RBP9.69□□□□□ -0.86
TRIM4-204ENST00000447480 MYOM1P52179 1685 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 ACEP12821 1306 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 MFSD10Q14728 455 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
TRIM4-204ENST00000447480 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 USP6P35125 1406 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 CPSF1Q10570 1443 aaKnown RBP9.67□□□□□ -0.86
TRIM4-204ENST00000447480 PTMSP20962 102 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
TRIM4-204ENST00000447480 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
TRIM4-204ENST00000447480 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 C8orf34Q49A92 452 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 A0A1W2PP64 1363 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 JCADQ9P266 1359 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 ZNF521Q96K83 1311 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 PRR36Q9H6K5 1346 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 FOXO3O43524 673 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 PMFBP1Q8TBY8 1022 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
TRIM4-204ENST00000447480 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
TRIM4-204ENST00000447480 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 SPATA31A6Q5VVP1 1343 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 NRKQ7Z2Y5 1582 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 EIF5BO60841 1220 aaKnown RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 NUDT7P0C024 238 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms