RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 PRIM1P49642 420 aaKnown RBP21.09■□□□□ 0.97
UBE2F-216ENST00000445676 HDGFL2Q7Z4V5 671 aaPredicted RBP21.09■□□□□ 0.97
UBE2F-216ENST00000445676 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
UBE2F-216ENST00000445676 SYTL4Q96C24 671 aaPredicted RBP21.09■□□□□ 0.97
UBE2F-216ENST00000445676 SLC12A5Q9H2X9 1139 aa21.09■□□□□ 0.97
UBE2F-216ENST00000445676 C5P01031 1676 aa21.09■□□□□ 0.97
UBE2F-216ENST00000445676 TAF1LQ8IZX4 1826 aa21.08■□□□□ 0.97
UBE2F-216ENST00000445676 IFFO2Q5TF58 517 aa21.08■□□□□ 0.97
UBE2F-216ENST00000445676 LTV1Q96GA3 475 aaPredicted RBP21.08■□□□□ 0.97
UBE2F-216ENST00000445676 MEGF6O75095 1541 aa21.08■□□□□ 0.96
UBE2F-216ENST00000445676 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
UBE2F-216ENST00000445676 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
UBE2F-216ENST00000445676 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
UBE2F-216ENST00000445676 COL23A1Q86Y22 540 aaPredicted RBP21.03■□□□□ 0.96
UBE2F-216ENST00000445676 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
UBE2F-216ENST00000445676 MAP3K19Q56UN5 1328 aa21.03■□□□□ 0.96
UBE2F-216ENST00000445676 HOXC9P31274 260 aa21.02■□□□□ 0.96
UBE2F-216ENST00000445676 TERF2IPQ9NYB0 399 aa21.02■□□□□ 0.96
UBE2F-216ENST00000445676 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
UBE2F-216ENST00000445676 ZCRB1Q8TBF4 217 aaKnown RBP21.01■□□□□ 0.95
UBE2F-216ENST00000445676 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
UBE2F-216ENST00000445676 MSH5O43196 834 aa21■□□□□ 0.95
UBE2F-216ENST00000445676 USP47Q96K76 1375 aa20.99■□□□□ 0.95
UBE2F-216ENST00000445676 TOGARAM1Q9Y4F4 1720 aa20.99■□□□□ 0.95
UBE2F-216ENST00000445676 FBLN1P23142 703 aa20.99■□□□□ 0.95
UBE2F-216ENST00000445676 ITGB4P16144 1822 aa20.99■□□□□ 0.95
UBE2F-216ENST00000445676 UBR3Q6ZT12 1888 aa20.98■□□□□ 0.95
UBE2F-216ENST00000445676 ADCY9O60503 1353 aa20.97■□□□□ 0.95
UBE2F-216ENST00000445676 C4BP0C0L5 1744 aa20.96■□□□□ 0.95
UBE2F-216ENST00000445676 AMPHP49418 695 aa20.96■□□□□ 0.95
UBE2F-216ENST00000445676 COG3Q96JB2 828 aa20.96■□□□□ 0.95
UBE2F-216ENST00000445676 PUS7Q96PZ0 661 aaKnown RBP20.96■□□□□ 0.95
UBE2F-216ENST00000445676 RTL1A6NKG5 1358 aa20.96■□□□□ 0.95
UBE2F-216ENST00000445676 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
UBE2F-216ENST00000445676 USHBP1Q8N6Y0 703 aa20.93■□□□□ 0.94
UBE2F-216ENST00000445676 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
UBE2F-216ENST00000445676 CD2APQ9Y5K6 639 aa20.93■□□□□ 0.94
UBE2F-216ENST00000445676 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
UBE2F-216ENST00000445676 RRS1Q15050 365 aaKnown RBP20.91■□□□□ 0.94
UBE2F-216ENST00000445676 PALLDQ8WX93 1383 aa20.91■□□□□ 0.94
UBE2F-216ENST00000445676 GPBP1L1Q9HC44 474 aaPredicted RBP20.91■□□□□ 0.94
UBE2F-216ENST00000445676 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
UBE2F-216ENST00000445676 KIF20BQ96Q89 1820 aa20.9■□□□□ 0.94
UBE2F-216ENST00000445676 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
UBE2F-216ENST00000445676 TESK2Q96S53 571 aa20.9■□□□□ 0.94
UBE2F-216ENST00000445676 AMIGO3Q86WK7 504 aa20.89■□□□□ 0.93
UBE2F-216ENST00000445676 HSPA6P17066 643 aa20.88■□□□□ 0.93
UBE2F-216ENST00000445676 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
UBE2F-216ENST00000445676 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
UBE2F-216ENST00000445676 RAPGEF4Q8WZA2 1011 aa20.88■□□□□ 0.93
UBE2F-216ENST00000445676 SMG6Q86US8 1419 aaKnown RBP20.87■□□□□ 0.93
UBE2F-216ENST00000445676 PCDH11XQ9BZA7 1347 aa20.87■□□□□ 0.93
UBE2F-216ENST00000445676 PCDH11YQ9BZA8 1340 aa20.87■□□□□ 0.93
UBE2F-216ENST00000445676 CICQ96RK0 1608 aaPredicted RBP20.86■□□□□ 0.93
UBE2F-216ENST00000445676 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
UBE2F-216ENST00000445676 TATP17735 454 aaPredicted RBP20.85■□□□□ 0.93
UBE2F-216ENST00000445676 WWC3Q9ULE0 1092 aa20.85■□□□□ 0.93
UBE2F-216ENST00000445676 CYP27B1O15528 508 aa20.84■□□□□ 0.93
UBE2F-216ENST00000445676 MPRIPQ6WCQ1 1025 aa20.84■□□□□ 0.93
UBE2F-216ENST00000445676 SMIM5Q71RC9 77 aa20.84■□□□□ 0.93
UBE2F-216ENST00000445676 KIAA1551Q9HCM1 1747 aa20.84■□□□□ 0.93
UBE2F-216ENST00000445676 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.93
UBE2F-216ENST00000445676 AK7Q96M32 723 aa20.83■□□□□ 0.93
UBE2F-216ENST00000445676 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.93
UBE2F-216ENST00000445676 INSRP06213 1382 aa20.83■□□□□ 0.92
UBE2F-216ENST00000445676 ST20-MTHFSA0A0A6YYL1 179 aa20.82■□□□□ 0.92
UBE2F-216ENST00000445676 FYB1O15117 783 aa20.82■□□□□ 0.92
UBE2F-216ENST00000445676 PHF14O94880 888 aa20.81■□□□□ 0.92
UBE2F-216ENST00000445676 HMGB2P26583 209 aaKnown RBP20.81■□□□□ 0.92
UBE2F-216ENST00000445676 HSP90AB2PQ58FF8 381 aa20.81■□□□□ 0.92
UBE2F-216ENST00000445676 FLT4P35916 1363 aa20.81■□□□□ 0.92
UBE2F-216ENST00000445676 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
UBE2F-216ENST00000445676 N4BP2Q86UW6 1770 aaPredicted RBP20.8■□□□□ 0.92
UBE2F-216ENST00000445676 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
UBE2F-216ENST00000445676 ANKRD26Q9UPS8 1709 aa20.79■□□□□ 0.92
UBE2F-216ENST00000445676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.79■□□□□ 0.92
UBE2F-216ENST00000445676 KIF3CO14782 793 aa20.79■□□□□ 0.92
UBE2F-216ENST00000445676 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
UBE2F-216ENST00000445676 NCAPD2Q15021 1401 aa20.78■□□□□ 0.92
UBE2F-216ENST00000445676 PIGBQ92521 554 aa20.78■□□□□ 0.92
UBE2F-216ENST00000445676 KIF24Q5T7B8 1368 aa20.77■□□□□ 0.92
UBE2F-216ENST00000445676 LINC00116Q8NCU8 138 aa20.77■□□□□ 0.92
UBE2F-216ENST00000445676 BRCA1P38398 1863 aaKnown RBP20.76■□□□□ 0.91
UBE2F-216ENST00000445676 SSFA2P28290 1259 aa20.76■□□□□ 0.91
UBE2F-216ENST00000445676 PXDNLA1KZ92 1463 aa20.75■□□□□ 0.91
UBE2F-216ENST00000445676 LOC102724428A0A0B4J2F2 783 aa20.74■□□□□ 0.91
UBE2F-216ENST00000445676 SIK1P57059 783 aa20.74■□□□□ 0.91
UBE2F-216ENST00000445676 NKX1-1Q15270 411 aaPredicted RBP20.73■□□□□ 0.91
UBE2F-216ENST00000445676 EMILIN1Q9Y6C2 1016 aa20.72■□□□□ 0.91
UBE2F-216ENST00000445676 GNPATO15228 680 aa20.71■□□□□ 0.91
UBE2F-216ENST00000445676 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
UBE2F-216ENST00000445676 ITPK1Q13572 414 aa20.71■□□□□ 0.91
UBE2F-216ENST00000445676 COL5A3P25940 1745 aaPredicted RBP20.7■□□□□ 0.9
UBE2F-216ENST00000445676 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
UBE2F-216ENST00000445676 MMP10P09238 476 aa20.69■□□□□ 0.9
UBE2F-216ENST00000445676 ASAP1Q9ULH1 1129 aa20.69■□□□□ 0.9
UBE2F-216ENST00000445676 ZNF831Q5JPB2 1677 aa20.69■□□□□ 0.9
UBE2F-216ENST00000445676 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
UBE2F-216ENST00000445676 C4AP0C0L4 1744 aa20.68■□□□□ 0.9
UBE2F-216ENST00000445676 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms