RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 HOXC9P31274 260 aa27.17■■□□□ 1.94
SMIM1-201ENST00000444870 CHD4Q14839 1912 aa27.16■■□□□ 1.94
SMIM1-201ENST00000444870 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
SMIM1-201ENST00000444870 ANKRD36BQ8N2N9 1353 aa27.16■■□□□ 1.94
SMIM1-201ENST00000444870 PUS7Q96PZ0 661 aaKnown RBP27.13■■□□□ 1.93
SMIM1-201ENST00000444870 GIGYF1O75420 1035 aaPredicted RBP27.12■■□□□ 1.93
SMIM1-201ENST00000444870 USHBP1Q8N6Y0 703 aa27.12■■□□□ 1.93
SMIM1-201ENST00000444870 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
SMIM1-201ENST00000444870 NSD2O96028 1365 aa27.1■■□□□ 1.93
SMIM1-201ENST00000444870 ST20-MTHFSA0A0A6YYL1 179 aa27.1■■□□□ 1.93
SMIM1-201ENST00000444870 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
SMIM1-201ENST00000444870 MSL1Q68DK7 614 aa27.1■■□□□ 1.93
SMIM1-201ENST00000444870 COL23A1Q86Y22 540 aaPredicted RBP27.1■■□□□ 1.93
SMIM1-201ENST00000444870 MEGF6O75095 1541 aa27.08■■□□□ 1.93
SMIM1-201ENST00000444870 NBPF6Q5VWK0 638 aa27.08■■□□□ 1.93
SMIM1-201ENST00000444870 NBPF4Q96M43 638 aa27.08■■□□□ 1.93
SMIM1-201ENST00000444870 USP47Q96K76 1375 aa27.08■■□□□ 1.93
SMIM1-201ENST00000444870 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMIM1-201ENST00000444870 TESK2Q96S53 571 aa27.07■■□□□ 1.92
SMIM1-201ENST00000444870 RAPGEF4Q8WZA2 1011 aa27.06■■□□□ 1.92
SMIM1-201ENST00000444870 GGNBP2Q9H3C7 697 aa27.05■■□□□ 1.92
SMIM1-201ENST00000444870 DOT1LQ8TEK3 1739 aa27.04■■□□□ 1.92
SMIM1-201ENST00000444870 GRIN3BO60391 1043 aa27.04■■□□□ 1.92
SMIM1-201ENST00000444870 FAM208AQ9UK61 1670 aaKnown RBP27.03■■□□□ 1.92
SMIM1-201ENST00000444870 TATP17735 454 aaPredicted RBP27.02■■□□□ 1.92
SMIM1-201ENST00000444870 QSER1Q2KHR3 1735 aa27.02■■□□□ 1.92
SMIM1-201ENST00000444870 GOLGB1Q14789 3259 aaKnown RBP27.01■■□□□ 1.91
SMIM1-201ENST00000444870 TUBGCP6Q96RT7 1819 aa27.01■■□□□ 1.91
SMIM1-201ENST00000444870 FYB1O15117 783 aa27■■□□□ 1.91
SMIM1-201ENST00000444870 MPRIPQ6WCQ1 1025 aa27■■□□□ 1.91
SMIM1-201ENST00000444870 RGPD2P0DJD1 1756 aa26.99■■□□□ 1.91
SMIM1-201ENST00000444870 HSP90AB2PQ58FF8 381 aa26.98■■□□□ 1.91
SMIM1-201ENST00000444870 RTL1A6NKG5 1358 aa26.97■■□□□ 1.91
SMIM1-201ENST00000444870 CGNL1Q0VF96 1302 aa26.97■■□□□ 1.91
SMIM1-201ENST00000444870 LY75O60449 1722 aa26.97■■□□□ 1.91
SMIM1-201ENST00000444870 SMG6Q86US8 1419 aaKnown RBP26.97■■□□□ 1.91
SMIM1-201ENST00000444870 COL24A1Q17RW2 1714 aa26.96■■□□□ 1.91
SMIM1-201ENST00000444870 SLC24A1O60721 1099 aa26.95■■□□□ 1.9
SMIM1-201ENST00000444870 SHANK3Q9BYB0 1731 aa26.95■■□□□ 1.9
SMIM1-201ENST00000444870 PALLDQ8WX93 1383 aa26.94■■□□□ 1.9
SMIM1-201ENST00000444870 PCDH11XQ9BZA7 1347 aa26.93■■□□□ 1.9
SMIM1-201ENST00000444870 PCDH11YQ9BZA8 1340 aa26.93■■□□□ 1.9
SMIM1-201ENST00000444870 WWC3Q9ULE0 1092 aa26.93■■□□□ 1.9
SMIM1-201ENST00000444870 SMIM5Q71RC9 77 aa26.92■■□□□ 1.9
SMIM1-201ENST00000444870 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
SMIM1-201ENST00000444870 CD2APQ9Y5K6 639 aa26.92■■□□□ 1.9
SMIM1-201ENST00000444870 PHF14O94880 888 aa26.91■■□□□ 1.9
SMIM1-201ENST00000444870 TMF1P82094 1093 aa26.91■■□□□ 1.9
SMIM1-201ENST00000444870 AK7Q96M32 723 aa26.91■■□□□ 1.9
SMIM1-201ENST00000444870 CYP27B1O15528 508 aa26.9■■□□□ 1.9
SMIM1-201ENST00000444870 ZNF526Q8TF50 670 aaPredicted RBP26.9■■□□□ 1.9
SMIM1-201ENST00000444870 ATP10DQ9P241 1426 aa26.9■■□□□ 1.9
SMIM1-201ENST00000444870 INSRP06213 1382 aa26.89■■□□□ 1.9
SMIM1-201ENST00000444870 AMIGO3Q86WK7 504 aa26.87■■□□□ 1.89
SMIM1-201ENST00000444870 SMARCC1Q92922 1105 aaPredicted RBP26.87■■□□□ 1.89
SMIM1-201ENST00000444870 GPBP1L1Q9HC44 474 aaPredicted RBP26.87■■□□□ 1.89
SMIM1-201ENST00000444870 FLT4P35916 1363 aa26.86■■□□□ 1.89
SMIM1-201ENST00000444870 PPM1GO15355 546 aaPredicted RBP26.86■■□□□ 1.89
SMIM1-201ENST00000444870 HMGB2P26583 209 aaKnown RBP26.86■■□□□ 1.89
SMIM1-201ENST00000444870 PIGBQ92521 554 aa26.85■■□□□ 1.89
SMIM1-201ENST00000444870 EMILIN1Q9Y6C2 1016 aa26.85■■□□□ 1.89
SMIM1-201ENST00000444870 C5P01031 1676 aa26.83■■□□□ 1.89
SMIM1-201ENST00000444870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.83■■□□□ 1.89
SMIM1-201ENST00000444870 IGSF1Q8N6C5 1336 aa26.81■■□□□ 1.88
SMIM1-201ENST00000444870 IFFO2Q5TF58 517 aa26.79■■□□□ 1.88
SMIM1-201ENST00000444870 CARD14Q9BXL6 1004 aa26.79■■□□□ 1.88
SMIM1-201ENST00000444870 SPG7Q9UQ90 795 aa26.79■■□□□ 1.88
SMIM1-201ENST00000444870 LOC102724428A0A0B4J2F2 783 aa26.78■■□□□ 1.88
SMIM1-201ENST00000444870 SIK1P57059 783 aa26.78■■□□□ 1.88
SMIM1-201ENST00000444870 CDCA8Q53HL2 280 aa26.78■■□□□ 1.88
SMIM1-201ENST00000444870 LINC00116Q8NCU8 138 aa26.78■■□□□ 1.88
SMIM1-201ENST00000444870 KIF24Q5T7B8 1368 aa26.77■■□□□ 1.88
SMIM1-201ENST00000444870 C4BP0C0L5 1744 aa26.76■■□□□ 1.88
SMIM1-201ENST00000444870 TMOD3Q9NYL9 352 aa26.76■■□□□ 1.87
SMIM1-201ENST00000444870 GNPATO15228 680 aa26.75■■□□□ 1.87
SMIM1-201ENST00000444870 SSFA2P28290 1259 aa26.75■■□□□ 1.87
SMIM1-201ENST00000444870 ASAP1Q9ULH1 1129 aa26.75■■□□□ 1.87
SMIM1-201ENST00000444870 CEP350Q5VT06 3117 aa26.74■■□□□ 1.87
SMIM1-201ENST00000444870 ATP6V1AP38606 617 aa26.74■■□□□ 1.87
SMIM1-201ENST00000444870 NKX1-1Q15270 411 aaPredicted RBP26.74■■□□□ 1.87
SMIM1-201ENST00000444870 NSD3Q9BZ95 1437 aa26.73■■□□□ 1.87
SMIM1-201ENST00000444870 ITPK1Q13572 414 aa26.73■■□□□ 1.87
SMIM1-201ENST00000444870 EYA1Q99502 592 aa26.73■■□□□ 1.87
SMIM1-201ENST00000444870 TAF1LQ8IZX4 1826 aa26.73■■□□□ 1.87
SMIM1-201ENST00000444870 ADCY9O60503 1353 aa26.72■■□□□ 1.87
SMIM1-201ENST00000444870 HSPA6P17066 643 aa26.72■■□□□ 1.87
SMIM1-201ENST00000444870 TOGARAM1Q9Y4F4 1720 aa26.72■■□□□ 1.87
SMIM1-201ENST00000444870 ITGB4P16144 1822 aa26.69■■□□□ 1.86
SMIM1-201ENST00000444870 IFNL2Q8IZJ0 200 aa26.69■■□□□ 1.86
SMIM1-201ENST00000444870 KIF20BQ96Q89 1820 aa26.69■■□□□ 1.86
SMIM1-201ENST00000444870 WASHC2AQ641Q2 1341 aa26.68■■□□□ 1.86
SMIM1-201ENST00000444870 MMP10P09238 476 aa26.68■■□□□ 1.86
SMIM1-201ENST00000444870 PHKG2P15735 406 aa26.68■■□□□ 1.86
SMIM1-201ENST00000444870 POLR3GLQ9BT43 218 aa26.67■■□□□ 1.86
SMIM1-201ENST00000444870 ATG3Q9NT62 314 aa26.67■■□□□ 1.86
SMIM1-201ENST00000444870 TNNT2P45379 298 aaPredicted RBP26.66■■□□□ 1.86
SMIM1-201ENST00000444870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.66■■□□□ 1.86
SMIM1-201ENST00000444870 UBR3Q6ZT12 1888 aa26.65■■□□□ 1.86
SMIM1-201ENST00000444870 RBM42Q9BTD8 480 aaKnown RBP26.64■■□□□ 1.86
SMIM1-201ENST00000444870 POLKQ9UBT6 870 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms