RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 MRPL50Q8N5N7 158 aaKnown RBP19.98■□□□□ 0.79
SNX13-204ENST00000444712 CAMTA1Q9Y6Y1 1673 aa19.98■□□□□ 0.79
SNX13-204ENST00000444712 HSPA2P54652 639 aa19.97■□□□□ 0.79
SNX13-204ENST00000444712 RWDD1Q9H446 243 aaPredicted RBP19.97■□□□□ 0.79
SNX13-204ENST00000444712 ITPRIPQ8IWB1 547 aa19.97■□□□□ 0.79
SNX13-204ENST00000444712 TSPYL6Q8N831 410 aa19.97■□□□□ 0.79
SNX13-204ENST00000444712 RGPD2P0DJD1 1756 aa19.96■□□□□ 0.79
SNX13-204ENST00000444712 MAP3K5Q99683 1374 aa19.96■□□□□ 0.79
SNX13-204ENST00000444712 GNAT3A8MTJ3 354 aa19.96■□□□□ 0.79
SNX13-204ENST00000444712 ARHGEF25Q86VW2 580 aa19.96■□□□□ 0.79
SNX13-204ENST00000444712 LTV1Q96GA3 475 aaPredicted RBP19.96■□□□□ 0.79
SNX13-204ENST00000444712 NPHP3Q7Z494 1330 aa19.96■□□□□ 0.79
SNX13-204ENST00000444712 C8orf58Q8NAV2 365 aa19.95■□□□□ 0.78
SNX13-204ENST00000444712 NCAPD2Q15021 1401 aa19.94■□□□□ 0.78
SNX13-204ENST00000444712 IGHDP01880 384 aa19.94■□□□□ 0.78
SNX13-204ENST00000444712 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
SNX13-204ENST00000444712 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
SNX13-204ENST00000444712 API5Q9BZZ5 524 aaKnown RBP19.94■□□□□ 0.78
SNX13-204ENST00000444712 BABAM1Q9NWV8 329 aa19.94■□□□□ 0.78
SNX13-204ENST00000444712 ABCC6O95255 1503 aa19.94■□□□□ 0.78
SNX13-204ENST00000444712 KDM4FA0A1W2PPD8 638 aa19.93■□□□□ 0.78
SNX13-204ENST00000444712 LMO7Q8WWI1 1683 aa19.93■□□□□ 0.78
SNX13-204ENST00000444712 PDE4AP27815 886 aa19.93■□□□□ 0.78
SNX13-204ENST00000444712 TMEM57Q8N5G2 664 aa19.93■□□□□ 0.78
SNX13-204ENST00000444712 BACH2Q9BYV9 841 aa19.92■□□□□ 0.78
SNX13-204ENST00000444712 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
SNX13-204ENST00000444712 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
SNX13-204ENST00000444712 FAM208AQ9UK61 1670 aaKnown RBP19.92■□□□□ 0.78
SNX13-204ENST00000444712 ELL2O00472 640 aaPredicted RBP19.92■□□□□ 0.78
SNX13-204ENST00000444712 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
SNX13-204ENST00000444712 PCDHB15Q9Y5E8 787 aa19.92■□□□□ 0.78
SNX13-204ENST00000444712 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
SNX13-204ENST00000444712 VIRMAQ69YN4 1812 aaKnown RBP19.91■□□□□ 0.78
SNX13-204ENST00000444712 TNS3Q68CZ2 1445 aa19.91■□□□□ 0.78
SNX13-204ENST00000444712 RGPD5Q99666 1765 aa19.9■□□□□ 0.78
SNX13-204ENST00000444712 ABCC4O15439 1325 aa19.9■□□□□ 0.78
SNX13-204ENST00000444712 ZBTB7CA1YPR0 619 aa19.9■□□□□ 0.78
SNX13-204ENST00000444712 CRYBG1Q9Y4K1 1723 aa19.89■□□□□ 0.78
SNX13-204ENST00000444712 HDAC1Q13547 482 aaPredicted RBP19.89■□□□□ 0.77
SNX13-204ENST00000444712 NBPF6Q5VWK0 638 aa19.88■□□□□ 0.77
SNX13-204ENST00000444712 NBPF4Q96M43 638 aa19.88■□□□□ 0.77
SNX13-204ENST00000444712 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
SNX13-204ENST00000444712 PXDNQ92626 1479 aa19.88■□□□□ 0.77
SNX13-204ENST00000444712 ANP32AP39687 249 aaKnown RBP19.88■□□□□ 0.77
SNX13-204ENST00000444712 AMOTQ4VCS5 1084 aa19.88■□□□□ 0.77
SNX13-204ENST00000444712 PTPRCP08575 1304 aa19.87■□□□□ 0.77
SNX13-204ENST00000444712 PLEKHO1Q53GL0 409 aaPredicted RBP19.86■□□□□ 0.77
SNX13-204ENST00000444712 ANKRD24Q8TF21 1146 aa19.86■□□□□ 0.77
SNX13-204ENST00000444712 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
SNX13-204ENST00000444712 OVOS2A0A0G2JMS6 1433 aa19.85■□□□□ 0.77
SNX13-204ENST00000444712 RGS3P49796 1198 aa19.85■□□□□ 0.77
SNX13-204ENST00000444712 FAM161AQ3B820 660 aa19.85■□□□□ 0.77
SNX13-204ENST00000444712 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
SNX13-204ENST00000444712 COL18A1P39060 1754 aa19.85■□□□□ 0.77
SNX13-204ENST00000444712 KDM3BQ7LBC6 1761 aa19.85■□□□□ 0.77
SNX13-204ENST00000444712 CEMIPQ8WUJ3 1361 aa19.84■□□□□ 0.77
SNX13-204ENST00000444712 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
SNX13-204ENST00000444712 AKAP4Q5JQC9 854 aa19.83■□□□□ 0.77
SNX13-204ENST00000444712 IL17REQ8NFR9 667 aa19.83■□□□□ 0.76
SNX13-204ENST00000444712 CHMP4AQ9BY43 222 aa19.83■□□□□ 0.76
SNX13-204ENST00000444712 SPATA31A3Q5VYP0 1347 aa19.82■□□□□ 0.76
SNX13-204ENST00000444712 SKAP1Q86WV1 359 aa19.82■□□□□ 0.76
SNX13-204ENST00000444712 ERBB3P21860 1342 aa19.82■□□□□ 0.76
SNX13-204ENST00000444712 ZBTB7BO15156 539 aaPredicted RBP19.81■□□□□ 0.76
SNX13-204ENST00000444712 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
SNX13-204ENST00000444712 KRT24Q2M2I5 525 aa19.81■□□□□ 0.76
SNX13-204ENST00000444712 INTS3Q68E01 1043 aaKnown RBP19.8■□□□□ 0.76
SNX13-204ENST00000444712 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
SNX13-204ENST00000444712 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
SNX13-204ENST00000444712 CCDC30Q5VVM6 783 aa19.8■□□□□ 0.76
SNX13-204ENST00000444712 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
SNX13-204ENST00000444712 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
SNX13-204ENST00000444712 PDZRN3Q9UPQ7 1066 aa19.8■□□□□ 0.76
SNX13-204ENST00000444712 CPDO75976 1380 aa19.79■□□□□ 0.76
SNX13-204ENST00000444712 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
SNX13-204ENST00000444712 ADAMTS7Q9UKP4 1686 aa19.79■□□□□ 0.76
SNX13-204ENST00000444712 N4BP2Q86UW6 1770 aaPredicted RBP19.79■□□□□ 0.76
SNX13-204ENST00000444712 RGS12O14924 1447 aa19.79■□□□□ 0.76
SNX13-204ENST00000444712 ZC3H6P61129 1189 aaKnown RBP19.78■□□□□ 0.76
SNX13-204ENST00000444712 SMC5Q8IY18 1101 aa19.78■□□□□ 0.76
SNX13-204ENST00000444712 AXIN2Q9Y2T1 843 aa19.78■□□□□ 0.76
SNX13-204ENST00000444712 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
SNX13-204ENST00000444712 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
SNX13-204ENST00000444712 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
SNX13-204ENST00000444712 SIPA1L3O60292 1781 aaPredicted RBP19.77■□□□□ 0.76
SNX13-204ENST00000444712 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
SNX13-204ENST00000444712 HOXB7P09629 217 aa19.76■□□□□ 0.75
SNX13-204ENST00000444712 TEFQ10587 303 aa19.76■□□□□ 0.75
SNX13-204ENST00000444712 C8orf34Q49A92 452 aa19.76■□□□□ 0.75
SNX13-204ENST00000444712 NHSL1Q5SYE7 1610 aa19.76■□□□□ 0.75
SNX13-204ENST00000444712 GCC1Q96CN9 775 aa19.75■□□□□ 0.75
SNX13-204ENST00000444712 SLAIN2Q9P270 581 aa19.75■□□□□ 0.75
SNX13-204ENST00000444712 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
SNX13-204ENST00000444712 RAPGEF4Q8WZA2 1011 aa19.74■□□□□ 0.75
SNX13-204ENST00000444712 SCN11AQ9UI33 1791 aa19.74■□□□□ 0.75
SNX13-204ENST00000444712 ABCA3Q99758 1704 aa19.74■□□□□ 0.75
SNX13-204ENST00000444712 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
SNX13-204ENST00000444712 CCT4P50991 539 aaKnown RBP19.73■□□□□ 0.75
SNX13-204ENST00000444712 PKD1L3Q7Z443 1732 aa19.72■□□□□ 0.75
SNX13-204ENST00000444712 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms