RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 LRRC37A3O60309 1634 aa23.91■■□□□ 1.42
CIRBP-203ENST00000444172 CCDC184Q52MB2 194 aa23.9■■□□□ 1.42
CIRBP-203ENST00000444172 FAM182BQ5T319 152 aa23.9■■□□□ 1.42
CIRBP-203ENST00000444172 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
CIRBP-203ENST00000444172 DDX54Q8TDD1 881 aaKnown RBP23.9■■□□□ 1.42
CIRBP-203ENST00000444172 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
CIRBP-203ENST00000444172 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
CIRBP-203ENST00000444172 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
CIRBP-203ENST00000444172 KDRP35968 1356 aa23.88■■□□□ 1.41
CIRBP-203ENST00000444172 SPG7Q9UQ90 795 aa23.87■■□□□ 1.41
CIRBP-203ENST00000444172 PLEKHO1Q53GL0 409 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-203ENST00000444172 TNS2Q63HR2 1409 aa23.85■■□□□ 1.41
CIRBP-203ENST00000444172 MARCH10Q8NA82 808 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-203ENST00000444172 FCHSD2O94868 740 aa23.84■■□□□ 1.41
CIRBP-203ENST00000444172 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
CIRBP-203ENST00000444172 RSPH6AQ9H0K4 717 aa23.84■■□□□ 1.41
CIRBP-203ENST00000444172 AMOTQ4VCS5 1084 aa23.83■■□□□ 1.41
CIRBP-203ENST00000444172 MIER1Q8N108 512 aa23.82■■□□□ 1.4
CIRBP-203ENST00000444172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.82■■□□□ 1.4
CIRBP-203ENST00000444172 PCDH11XQ9BZA7 1347 aa23.82■■□□□ 1.4
CIRBP-203ENST00000444172 PCDH11YQ9BZA8 1340 aa23.82■■□□□ 1.4
CIRBP-203ENST00000444172 PKD1L3Q7Z443 1732 aa23.81■■□□□ 1.4
CIRBP-203ENST00000444172 NEFMP07197 916 aa23.81■■□□□ 1.4
CIRBP-203ENST00000444172 PNNQ9H307 717 aaKnown RBP23.81■■□□□ 1.4
CIRBP-203ENST00000444172 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
CIRBP-203ENST00000444172 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-203ENST00000444172 FAM196AQ6ZSG2 479 aa23.8■■□□□ 1.4
CIRBP-203ENST00000444172 ADAMTS8Q9UP79 889 aa23.8■■□□□ 1.4
CIRBP-203ENST00000444172 CYP27B1O15528 508 aa23.79■■□□□ 1.4
CIRBP-203ENST00000444172 KAT6BQ8WYB5 2073 aa23.79■■□□□ 1.4
CIRBP-203ENST00000444172 C1orf141Q5JVX7 400 aa23.78■■□□□ 1.4
CIRBP-203ENST00000444172 IFNL2Q8IZJ0 200 aa23.78■■□□□ 1.4
CIRBP-203ENST00000444172 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
CIRBP-203ENST00000444172 MTHFSDQ2M296 383 aaKnown RBP23.77■■□□□ 1.4
CIRBP-203ENST00000444172 PHKG2P15735 406 aa23.76■■□□□ 1.39
CIRBP-203ENST00000444172 CCDC146Q8IYE0 955 aa23.76■■□□□ 1.39
CIRBP-203ENST00000444172 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
CIRBP-203ENST00000444172 PLEKHG2Q9H7P9 1386 aa23.76■■□□□ 1.39
CIRBP-203ENST00000444172 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
CIRBP-203ENST00000444172 ACSBG1Q96GR2 724 aa23.75■■□□□ 1.39
CIRBP-203ENST00000444172 PLEKHF1Q96S99 279 aa23.75■■□□□ 1.39
CIRBP-203ENST00000444172 MAPK8IP3Q9UPT6 1336 aa23.75■■□□□ 1.39
CIRBP-203ENST00000444172 FAM9BQ8IZU0 186 aa23.74■■□□□ 1.39
CIRBP-203ENST00000444172 GAS2L2Q8NHY3 880 aa23.74■■□□□ 1.39
CIRBP-203ENST00000444172 AKAP4Q5JQC9 854 aa23.72■■□□□ 1.39
CIRBP-203ENST00000444172 TRIM37O94972 964 aa23.71■■□□□ 1.39
CIRBP-203ENST00000444172 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
CIRBP-203ENST00000444172 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
CIRBP-203ENST00000444172 NKX1-1Q15270 411 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-203ENST00000444172 SYTL4Q96C24 671 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-203ENST00000444172 SBF2Q86WG5 1849 aa23.7■■□□□ 1.38
CIRBP-203ENST00000444172 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
CIRBP-203ENST00000444172 BCL9O00512 1426 aa23.67■■□□□ 1.38
CIRBP-203ENST00000444172 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
CIRBP-203ENST00000444172 GNAT3A8MTJ3 354 aa23.67■■□□□ 1.38
CIRBP-203ENST00000444172 KCNQ2O43526 872 aa23.67■■□□□ 1.38
CIRBP-203ENST00000444172 PRIM1P49642 420 aaKnown RBP23.67■■□□□ 1.38
CIRBP-203ENST00000444172 SF3B2Q13435 895 aaKnown RBP23.67■■□□□ 1.38
CIRBP-203ENST00000444172 DCAF5Q96JK2 942 aa23.67■■□□□ 1.38
CIRBP-203ENST00000444172 NFE2L2Q16236 605 aa23.66■■□□□ 1.38
CIRBP-203ENST00000444172 UPF1Q92900 1129 aaKnown RBP eCLIP23.66■■□□□ 1.38
CIRBP-203ENST00000444172 NEUROD2Q15784 382 aa23.65■■□□□ 1.38
CIRBP-203ENST00000444172 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
CIRBP-203ENST00000444172 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
CIRBP-203ENST00000444172 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
CIRBP-203ENST00000444172 RTF1Q92541 710 aaKnown RBP23.64■■□□□ 1.37
CIRBP-203ENST00000444172 BCL11BQ9C0K0 894 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-203ENST00000444172 RRP7AQ9Y3A4 280 aaKnown RBP23.64■■□□□ 1.37
CIRBP-203ENST00000444172 DLG5Q8TDM6 1919 aa23.64■■□□□ 1.37
CIRBP-203ENST00000444172 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
CIRBP-203ENST00000444172 RNMTO43148 476 aaKnown RBP23.63■■□□□ 1.37
CIRBP-203ENST00000444172 RIPK4P57078 832 aa23.63■■□□□ 1.37
CIRBP-203ENST00000444172 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
CIRBP-203ENST00000444172 KDM6AO15550 1401 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-203ENST00000444172 ITGB4P16144 1822 aa23.62■■□□□ 1.37
CIRBP-203ENST00000444172 APBA3O96018 575 aa23.62■■□□□ 1.37
CIRBP-203ENST00000444172 TMPOP42166 694 aaKnown RBP23.62■■□□□ 1.37
CIRBP-203ENST00000444172 CCDC125Q86Z20 511 aa23.62■■□□□ 1.37
CIRBP-203ENST00000444172 NHSQ6T4R5 1651 aa23.61■■□□□ 1.37
CIRBP-203ENST00000444172 SCN11AQ9UI33 1791 aa23.61■■□□□ 1.37
CIRBP-203ENST00000444172 SENP3-EIF4A1A0A087X0R7 540 aa23.61■■□□□ 1.37
CIRBP-203ENST00000444172 APAF1O14727 1248 aa23.61■■□□□ 1.37
CIRBP-203ENST00000444172 CABP4P57796 275 aa23.61■■□□□ 1.37
CIRBP-203ENST00000444172 TMOD3Q9NYL9 352 aa23.61■■□□□ 1.37
CIRBP-203ENST00000444172 ERVV-2B6SEH9 535 aa23.6■■□□□ 1.37
CIRBP-203ENST00000444172 MCM10Q7L590 875 aa23.6■■□□□ 1.37
CIRBP-203ENST00000444172 DCTN1Q14203 1278 aa23.59■■□□□ 1.37
CIRBP-203ENST00000444172 IL17REQ8NFR9 667 aa23.59■■□□□ 1.37
CIRBP-203ENST00000444172 NFATC2IPQ8NCF5 419 aa23.58■■□□□ 1.37
CIRBP-203ENST00000444172 PIGBQ92521 554 aa23.58■■□□□ 1.37
CIRBP-203ENST00000444172 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.37
CIRBP-203ENST00000444172 BTAF1O14981 1849 aa23.57■■□□□ 1.36
CIRBP-203ENST00000444172 SOCS7O14512 581 aa23.57■■□□□ 1.36
CIRBP-203ENST00000444172 HTATSF1O43719 755 aaKnown RBP23.57■■□□□ 1.36
CIRBP-203ENST00000444172 BAG6P46379 1132 aa23.56■■□□□ 1.36
CIRBP-203ENST00000444172 TEFQ10587 303 aa23.56■■□□□ 1.36
CIRBP-203ENST00000444172 DEFB132Q7Z7B7 95 aa23.56■■□□□ 1.36
CIRBP-203ENST00000444172 SLC52A2Q9HAB3 445 aa23.56■■□□□ 1.36
CIRBP-203ENST00000444172 LMOD3Q0VAK6 560 aa23.55■■□□□ 1.36
CIRBP-203ENST00000444172 EN1Q05925 392 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms