RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 MPRIPQ6WCQ1 1025 aa13.3□□□□□ -0.28
FN1-211ENST00000443816 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
FN1-211ENST00000443816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
FN1-211ENST00000443816 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
FN1-211ENST00000443816 ARID3AQ99856 593 aa13.3□□□□□ -0.28
FN1-211ENST00000443816 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.289e-7■■□□□ 13.9
FN1-211ENST00000443816 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
FN1-211ENST00000443816 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
FN1-211ENST00000443816 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
FN1-211ENST00000443816 USP5P45974 858 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
FN1-211ENST00000443816 PDILTQ8N807 584 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 TEX13AQ9BXU3 409 aaPredicted RBP13.29□□□□□ -0.28
FN1-211ENST00000443816 SEC63Q9UGP8 760 aaKnown RBP13.29□□□□□ -0.28
FN1-211ENST00000443816 DACH1Q9UI36 760 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 ACBD3Q9H3P7 528 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 ATP2B1P20020 1258 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 TXLNBQ8N3L3 684 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 WASF1Q92558 559 aa13.29□□□□□ -0.28
FN1-211ENST00000443816 KRT32Q14532 448 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 TAF7Q15545 349 aaPredicted RBP13.28□□□□□ -0.28
FN1-211ENST00000443816 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 DZIP1Q86YF9 867 aaKnown RBP13.28□□□□□ -0.28
FN1-211ENST00000443816 RABEP1Q15276 862 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 ATF7IPQ6VMQ6 1270 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 ABCF2Q9UG63 623 aa13.28□□□□□ -0.28
FN1-211ENST00000443816 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.28
FN1-211ENST00000443816 AIDAQ96BJ3 306 aa13.27□□□□□ -0.28
FN1-211ENST00000443816 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.28
FN1-211ENST00000443816 FBXO3Q9UK99 471 aa13.27□□□□□ -0.28
FN1-211ENST00000443816 STK38Q15208 465 aa13.27□□□□□ -0.28
FN1-211ENST00000443816 KRT28Q7Z3Y7 464 aa13.27□□□□□ -0.28
FN1-211ENST00000443816 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.28
FN1-211ENST00000443816 NEK4P51957 841 aa13.27□□□□□ -0.28
FN1-211ENST00000443816 POLR3DP05423 398 aaPredicted RBP13.27□□□□□ -0.29
FN1-211ENST00000443816 CAGE1Q8TC20 777 aa13.27□□□□□ -0.29
FN1-211ENST00000443816 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
FN1-211ENST00000443816 EIF4G3O43432 1585 aaKnown RBP13.27□□□□□ -0.29
FN1-211ENST00000443816 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
FN1-211ENST00000443816 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
FN1-211ENST00000443816 RAB11FIP3O75154 756 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
FN1-211ENST00000443816 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 ST5P78524 1137 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 FOXO3O43524 673 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 IMMTQ16891 758 aaKnown RBP13.26□□□□□ -0.29
FN1-211ENST00000443816 THOC2Q8NI27 1593 aaKnown RBP13.26□□□□□ -0.29
FN1-211ENST00000443816 PDIA4P13667 645 aaKnown RBP13.26□□□□□ -0.29
FN1-211ENST00000443816 SLC5A1P13866 664 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 A0A087WZG4 1122 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 CCP110O43303 1012 aa13.26□□□□□ -0.29
FN1-211ENST00000443816 DHX8Q14562 1220 aaKnown RBP13.26□□□□□ -0.29
FN1-211ENST00000443816 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
FN1-211ENST00000443816 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
FN1-211ENST00000443816 RFC4P35249 363 aa13.25□□□□□ -0.29
FN1-211ENST00000443816 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
FN1-211ENST00000443816 EIF2AK4Q9P2K8 1649 aaKnown RBP13.25□□□□□ -0.29
FN1-211ENST00000443816 CFAP74Q9C0B2 1584 aa13.25□□□□□ -0.29
FN1-211ENST00000443816 PEG3Q9GZU2 1588 aa13.25□□□□□ -0.29
FN1-211ENST00000443816 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
FN1-211ENST00000443816 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
FN1-211ENST00000443816 TNRQ92752 1358 aa13.24□□□□□ -0.29
FN1-211ENST00000443816 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
FN1-211ENST00000443816 CEP131Q9UPN4 1083 aa13.24□□□□□ -0.29
FN1-211ENST00000443816 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
FN1-211ENST00000443816 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
FN1-211ENST00000443816 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
FN1-211ENST00000443816 BLOC1S2Q6QNY1 142 aa13.24□□□□□ -0.29
FN1-211ENST00000443816 MBD3O95983 291 aa13.24□□□□□ -0.29
FN1-211ENST00000443816 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 CDC5LQ99459 802 aaKnown RBP13.23□□□□□ -0.29
FN1-211ENST00000443816 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
FN1-211ENST00000443816 NCOA1Q15788 1441 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 MYO1BO43795 1136 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 FMNL2Q96PY5 1086 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 UBAP1LF5GYI3 381 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
FN1-211ENST00000443816 ERLIN2O94905 339 aa13.23□□□□□ -0.29
FN1-211ENST00000443816 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
FN1-211ENST00000443816 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
FN1-211ENST00000443816 GSE1Q14687 1217 aa13.22□□□□□ -0.29
FN1-211ENST00000443816 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
FN1-211ENST00000443816 MPHOSPH6Q99547 160 aaKnown RBP13.22□□□□□ -0.29
FN1-211ENST00000443816 SMC2O95347 1197 aa13.22□□□□□ -0.29
FN1-211ENST00000443816 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
FN1-211ENST00000443816 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms