RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 BAG4O95429 457 aaKnown RBP23.4■■□□□ 1.34
PAXBP1-204ENST00000443785 LMOD3Q0VAK6 560 aa23.39■■□□□ 1.34
PAXBP1-204ENST00000443785 MPNDQ8N594 471 aa23.39■■□□□ 1.34
PAXBP1-204ENST00000443785 PRPF40AO75400 957 aaKnown RBP23.39■■□□□ 1.33
PAXBP1-204ENST00000443785 ZMYM3Q14202 1370 aa23.39■■□□□ 1.33
PAXBP1-204ENST00000443785 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
PAXBP1-204ENST00000443785 ZFYVE9O95405 1425 aa23.39■■□□□ 1.33
PAXBP1-204ENST00000443785 MAP2P11137 1827 aaKnown RBP23.38■■□□□ 1.33
PAXBP1-204ENST00000443785 USP26Q9BXU7 913 aa23.38■■□□□ 1.33
PAXBP1-204ENST00000443785 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
PAXBP1-204ENST00000443785 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
PAXBP1-204ENST00000443785 ANKRD44Q8N8A2 993 aa23.37■■□□□ 1.33
PAXBP1-204ENST00000443785 RTF1Q92541 710 aaKnown RBP23.37■■□□□ 1.33
PAXBP1-204ENST00000443785 IL1RAPL2Q9NP60 686 aa23.37■■□□□ 1.33
PAXBP1-204ENST00000443785 TMEM131LA2VDJ0 1609 aa23.37■■□□□ 1.33
PAXBP1-204ENST00000443785 FKBP5Q13451 457 aaPredicted RBP23.36■■□□□ 1.33
PAXBP1-204ENST00000443785 MED14O60244 1454 aa23.35■■□□□ 1.33
PAXBP1-204ENST00000443785 ESPNB1AK53 854 aa23.35■■□□□ 1.33
PAXBP1-204ENST00000443785 CHMP4BQ9H444 224 aaKnown RBP23.35■■□□□ 1.33
PAXBP1-204ENST00000443785 NEK4P51957 841 aa23.35■■□□□ 1.33
PAXBP1-204ENST00000443785 UPF3BQ9BZI7 483 aaKnown RBP23.35■■□□□ 1.33
PAXBP1-204ENST00000443785 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
PAXBP1-204ENST00000443785 GOLGA6L22H0YM25 854 aa23.34■■□□□ 1.33
PAXBP1-204ENST00000443785 AMPHP49418 695 aa23.34■■□□□ 1.33
PAXBP1-204ENST00000443785 PTCH1Q13635 1447 aa23.34■■□□□ 1.33
PAXBP1-204ENST00000443785 INTS3Q68E01 1043 aaKnown RBP23.34■■□□□ 1.33
PAXBP1-204ENST00000443785 TTC21BQ7Z4L5 1316 aa23.34■■□□□ 1.33
PAXBP1-204ENST00000443785 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
PAXBP1-204ENST00000443785 RNF214Q8ND24 703 aa23.33■■□□□ 1.33
PAXBP1-204ENST00000443785 GDPD2Q9HCC8 539 aa23.33■■□□□ 1.33
PAXBP1-204ENST00000443785 CHL1O00533 1208 aa23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 NASPP49321 788 aaPredicted RBP23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 BRPF1P55201 1214 aaPredicted RBP23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 PNMA6EA0A0J9YXQ4 647 aa23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 ANO2Q9NQ90 1003 aa23.32■■□□□ 1.32
PAXBP1-204ENST00000443785 NEO1Q92859 1461 aa23.31■■□□□ 1.32
PAXBP1-204ENST00000443785 EDC4Q6P2E9 1401 aaKnown RBP23.31■■□□□ 1.32
PAXBP1-204ENST00000443785 ANXA1P04083 346 aa23.31■■□□□ 1.32
PAXBP1-204ENST00000443785 EIF2S2P20042 333 aaKnown RBP23.31■■□□□ 1.32
PAXBP1-204ENST00000443785 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
PAXBP1-204ENST00000443785 TSPOAP1O95153 1857 aa23.3■■□□□ 1.32
PAXBP1-204ENST00000443785 PALD1Q9ULE6 856 aa23.3■■□□□ 1.32
PAXBP1-204ENST00000443785 A2ML1A8K2U0 1454 aa23.3■■□□□ 1.32
PAXBP1-204ENST00000443785 NCOA3Q9Y6Q9 1424 aa23.3■■□□□ 1.32
PAXBP1-204ENST00000443785 ROBO2Q9HCK4 1378 aa23.3■■□□□ 1.32
PAXBP1-204ENST00000443785 RABEP1Q15276 862 aa23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 NUTM1Q86Y26 1132 aa23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 ARID3AQ99856 593 aa23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 CIZ1Q9ULV3 898 aaPredicted RBP23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 PREX1Q8TCU6 1659 aa23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 LTKP29376 864 aa23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 UNC5CLQ8IV45 518 aa23.29■■□□□ 1.32
PAXBP1-204ENST00000443785 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
PAXBP1-204ENST00000443785 DDX54Q8TDD1 881 aaKnown RBP23.27■■□□□ 1.32
PAXBP1-204ENST00000443785 PDE1AP54750 535 aa23.27■■□□□ 1.32
PAXBP1-204ENST00000443785 CPSF1Q10570 1443 aaKnown RBP23.27■■□□□ 1.32
PAXBP1-204ENST00000443785 RPAP2Q8IXW5 612 aaPredicted RBP23.26■■□□□ 1.31
PAXBP1-204ENST00000443785 PIK3R4Q99570 1358 aa23.26■■□□□ 1.31
PAXBP1-204ENST00000443785 EYA1Q99502 592 aa23.26■■□□□ 1.31
PAXBP1-204ENST00000443785 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
PAXBP1-204ENST00000443785 ST18O60284 1047 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 CLCN1P35523 988 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 NLRP6P59044 892 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 CFAP74Q9C0B2 1584 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 STK31Q9BXU1 1019 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 ZDHHC9Q9Y397 364 aa23.25■■□□□ 1.31
PAXBP1-204ENST00000443785 IL25Q9H293 177 aa23.24■■□□□ 1.31
PAXBP1-204ENST00000443785 SYCE3A1L190 88 aa23.24■■□□□ 1.31
PAXBP1-204ENST00000443785 ERC2O15083 957 aa23.23■■□□□ 1.31
PAXBP1-204ENST00000443785 ZSCAN23Q3MJ62 389 aa23.23■■□□□ 1.31
PAXBP1-204ENST00000443785 RBSNQ9H1K0 784 aa23.23■■□□□ 1.31
PAXBP1-204ENST00000443785 PHAXQ9H814 394 aaKnown RBP23.23■■□□□ 1.31
PAXBP1-204ENST00000443785 SKOR2Q2VWA4 1001 aaPredicted RBP23.22■■□□□ 1.31
PAXBP1-204ENST00000443785 GPT2Q8TD30 523 aa23.22■■□□□ 1.31
PAXBP1-204ENST00000443785 LMBRD1Q9NUN5 540 aa23.22■■□□□ 1.31
PAXBP1-204ENST00000443785 ATP7BP35670 1465 aa23.22■■□□□ 1.31
PAXBP1-204ENST00000443785 RGS12O14924 1447 aa23.22■■□□□ 1.31
PAXBP1-204ENST00000443785 KNDC1Q76NI1 1749 aa23.22■■□□□ 1.31
PAXBP1-204ENST00000443785 FLIIQ13045 1269 aa23.21■■□□□ 1.31
PAXBP1-204ENST00000443785 ANP32BQ92688 251 aaKnown RBP23.2■■□□□ 1.3
PAXBP1-204ENST00000443785 KIF20BQ96Q89 1820 aa23.2■■□□□ 1.3
PAXBP1-204ENST00000443785 HMMRO75330 724 aa23.2■■□□□ 1.3
PAXBP1-204ENST00000443785 GNAI2P04899 355 aa23.2■■□□□ 1.3
PAXBP1-204ENST00000443785 TMX3Q96JJ7 454 aa23.2■■□□□ 1.3
PAXBP1-204ENST00000443785 CDK12Q9NYV4 1490 aaPredicted RBP23.2■■□□□ 1.3
PAXBP1-204ENST00000443785 REC8O95072 547 aa23.19■■□□□ 1.3
PAXBP1-204ENST00000443785 CPA1P15085 419 aa23.19■■□□□ 1.3
PAXBP1-204ENST00000443785 KLHL40Q2TBA0 621 aa23.19■■□□□ 1.3
PAXBP1-204ENST00000443785 AMOTL2Q9Y2J4 779 aa23.18■■□□□ 1.3
PAXBP1-204ENST00000443785 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
PAXBP1-204ENST00000443785 RICTORQ6R327 1708 aa23.17■■□□□ 1.3
PAXBP1-204ENST00000443785 MX1P20591 662 aa23.17■■□□□ 1.3
PAXBP1-204ENST00000443785 TMEM63CQ9P1W3 806 aa23.17■■□□□ 1.3
PAXBP1-204ENST00000443785 NUCB2P80303 420 aa23.16■■□□□ 1.3
PAXBP1-204ENST00000443785 AATKQ6ZMQ8 1374 aa23.16■■□□□ 1.3
PAXBP1-204ENST00000443785 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms