RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
R3HDM1-210ENST00000443537 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
R3HDM1-210ENST00000443537 E9PCH4 1651 aa10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 MTMR2Q13614 643 aa10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 TMEM259Q4ZIN3 620 aa10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 ABCC3O15438 1527 aa10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 ARHGAP31Q2M1Z3 1444 aa10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 CNTLNQ9NXG0 1405 aa10.31□□□□□ -0.76
R3HDM1-210ENST00000443537 AP1G2O75843 785 aa10.3□□□□□ -0.76
R3HDM1-210ENST00000443537 PTPN5P54829 565 aa10.3□□□□□ -0.76
R3HDM1-210ENST00000443537 MORN1Q5T089 497 aa10.3□□□□□ -0.76
R3HDM1-210ENST00000443537 FBXO31Q5XUX0 539 aaPredicted RBP10.3□□□□□ -0.76
R3HDM1-210ENST00000443537 TSC1Q92574 1164 aa10.3□□□□□ -0.76
R3HDM1-210ENST00000443537 NEURL4Q96JN8 1562 aa10.3□□□□□ -0.76
R3HDM1-210ENST00000443537 Q3C1V9 767 aa10.29□□□□□ -0.76
R3HDM1-210ENST00000443537 SLC27A5Q9Y2P5 690 aa10.29□□□□□ -0.76
R3HDM1-210ENST00000443537 TRPM2O94759 1503 aa10.28□□□□□ -0.76
R3HDM1-210ENST00000443537 NR1I2O75469 434 aa10.28□□□□□ -0.76
R3HDM1-210ENST00000443537 ANKRD30BQ9BXX2 1392 aa10.27□□□□□ -0.76
R3HDM1-210ENST00000443537 SIGLEC1Q9BZZ2 1709 aa10.27□□□□□ -0.76
R3HDM1-210ENST00000443537 FER1L4A9Z1Z3 1794 aa10.27□□□□□ -0.77
R3HDM1-210ENST00000443537 SPDYE5A6NIY4 337 aa10.27□□□□□ -0.77
R3HDM1-210ENST00000443537 BANK1Q8NDB2 785 aa10.27□□□□□ -0.77
R3HDM1-210ENST00000443537 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.77
R3HDM1-210ENST00000443537 KIF1BO60333 1816 aa10.26□□□□□ -0.77
R3HDM1-210ENST00000443537 CLTCQ00610 1675 aaKnown RBP10.26□□□□□ -0.77
R3HDM1-210ENST00000443537 MCM6Q14566 821 aa10.26□□□□□ -0.77
R3HDM1-210ENST00000443537 BLOC1S3Q6QNY0 202 aa10.26□□□□□ -0.77
R3HDM1-210ENST00000443537 WASHC2CQ9Y4E1 1318 aa10.26□□□□□ -0.77
R3HDM1-210ENST00000443537 CCDC144AA2RUR9 1427 aa10.25□□□□□ -0.77
R3HDM1-210ENST00000443537 PTPRTO14522 1441 aa10.25□□□□□ -0.77
R3HDM1-210ENST00000443537 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
R3HDM1-210ENST00000443537 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
R3HDM1-210ENST00000443537 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
R3HDM1-210ENST00000443537 COPS2P61201 443 aa10.24□□□□□ -0.77
R3HDM1-210ENST00000443537 GGT6Q6P531 493 aa10.24□□□□□ -0.77
R3HDM1-210ENST00000443537 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
R3HDM1-210ENST00000443537 ESF1Q9H501 851 aaKnown RBP10.24□□□□□ -0.77
R3HDM1-210ENST00000443537 KDM5AP29375 1690 aaKnown RBP10.24□□□□□ -0.77
R3HDM1-210ENST00000443537 NPATQ14207 1427 aa10.24□□□□□ -0.77
R3HDM1-210ENST00000443537 PRR7Q8TB68 274 aa10.23□□□□□ -0.77
R3HDM1-210ENST00000443537 ZMYND15Q9H091 742 aa10.23□□□□□ -0.77
R3HDM1-210ENST00000443537 SNRKQ9NRH2 765 aa10.23□□□□□ -0.77
R3HDM1-210ENST00000443537 PIK3C2BO00750 1634 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 CFAP99D6REC4 459 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 RNF19BQ6ZMZ0 732 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 RETREG3Q86VR2 466 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 CFAP65Q6ZU64 1925 aaKnown RBP10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 TONSLQ96HA7 1378 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 NOS1P29475 1434 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 SPATA31D1Q6ZQQ2 1576 aa10.22□□□□□ -0.77
R3HDM1-210ENST00000443537 RAD21O60216 631 aa10.21□□□□□ -0.77
R3HDM1-210ENST00000443537 PCDH10Q9P2E7 1040 aa10.21□□□□□ -0.77
R3HDM1-210ENST00000443537 ARID4BQ4LE39 1312 aaPredicted RBP10.21□□□□□ -0.78
R3HDM1-210ENST00000443537 ADAMTSL3P82987 1691 aa10.21□□□□□ -0.78
R3HDM1-210ENST00000443537 SETD1BQ9UPS6 1966 aaKnown RBP10.21□□□□□ -0.78
R3HDM1-210ENST00000443537 APBB1O00213 710 aa10.2□□□□□ -0.78
R3HDM1-210ENST00000443537 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
R3HDM1-210ENST00000443537 USB1Q9BQ65 265 aaKnown RBP10.2□□□□□ -0.78
R3HDM1-210ENST00000443537 CLTCL1P53675 1640 aa10.19□□□□□ -0.78
R3HDM1-210ENST00000443537 ERVK-7P63135 1459 aa10.19□□□□□ -0.78
R3HDM1-210ENST00000443537 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
R3HDM1-210ENST00000443537 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
R3HDM1-210ENST00000443537 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
R3HDM1-210ENST00000443537 C3P01024 1663 aa10.18□□□□□ -0.78
R3HDM1-210ENST00000443537 PLA2R1Q13018 1463 aa10.18□□□□□ -0.78
R3HDM1-210ENST00000443537 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
R3HDM1-210ENST00000443537 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
R3HDM1-210ENST00000443537 MTMR14Q8NCE2 650 aa10.17□□□□□ -0.78
R3HDM1-210ENST00000443537 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
R3HDM1-210ENST00000443537 MTRQ99707 1265 aa10.17□□□□□ -0.78
R3HDM1-210ENST00000443537 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
R3HDM1-210ENST00000443537 SYNMO15061 1565 aa10.17□□□□□ -0.78
R3HDM1-210ENST00000443537 ADGRB3O60242 1522 aa10.17□□□□□ -0.78
R3HDM1-210ENST00000443537 IFT172Q9UG01 1749 aa10.16□□□□□ -0.78
R3HDM1-210ENST00000443537 ZMYM3Q14202 1370 aa10.16□□□□□ -0.78
R3HDM1-210ENST00000443537 SPSB2Q99619 263 aa10.16□□□□□ -0.78
R3HDM1-210ENST00000443537 NLRP1Q9C000 1473 aa10.16□□□□□ -0.78
R3HDM1-210ENST00000443537 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.78
R3HDM1-210ENST00000443537 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
R3HDM1-210ENST00000443537 THAP11Q96EK4 314 aa10.15□□□□□ -0.78
R3HDM1-210ENST00000443537 SPATA31E1Q6ZUB1 1445 aa10.15□□□□□ -0.79
R3HDM1-210ENST00000443537 PPLO60437 1756 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 KIAA1210Q9ULL0 1709 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 ZPR1O75312 459 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 POM121Q96HA1 1249 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 HCSTQ9UBK5 93 aa10.14□□□□□ -0.79
R3HDM1-210ENST00000443537 RPGRIP1LQ68CZ1 1315 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 MYOM2P54296 1465 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 TLL1O43897 1013 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 NEUROD1Q13562 356 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 DESI1Q6ICB0 168 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 SIN3AQ96ST3 1273 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 TMEM131LA2VDJ0 1609 aa10.13□□□□□ -0.79
R3HDM1-210ENST00000443537 UHRF1BP1Q6BDS2 1440 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms