RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 HSP90AB2PQ58FF8 381 aa12.05□□□□□ -0.48
USP6NL-203ENST00000443016 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
USP6NL-203ENST00000443016 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-203ENST00000443016 FLT4P35916 1363 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 NBPF6Q5VWK0 638 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 NBPF4Q96M43 638 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
USP6NL-203ENST00000443016 ZCRB1Q8TBF4 217 aaKnown RBP12.03□□□□□ -0.48
USP6NL-203ENST00000443016 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
USP6NL-203ENST00000443016 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
USP6NL-203ENST00000443016 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
USP6NL-203ENST00000443016 PROM2Q8N271 834 aa12.02□□□□□ -0.48
USP6NL-203ENST00000443016 MYOM1P52179 1685 aa12.02□□□□□ -0.48
USP6NL-203ENST00000443016 RREB1Q92766 1687 aa12.02□□□□□ -0.48
USP6NL-203ENST00000443016 FAM208AQ9UK61 1670 aaKnown RBP12.02□□□□□ -0.49
USP6NL-203ENST00000443016 INSRP06213 1382 aa12.02□□□□□ -0.49
USP6NL-203ENST00000443016 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
USP6NL-203ENST00000443016 PANK3Q9H999 370 aa12.02□□□□□ -0.49
USP6NL-203ENST00000443016 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
USP6NL-203ENST00000443016 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-203ENST00000443016 NUP188Q5SRE5 1749 aa12.01□□□□□ -0.49
USP6NL-203ENST00000443016 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-203ENST00000443016 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
USP6NL-203ENST00000443016 LRP5O75197 1615 aa12□□□□□ -0.49
USP6NL-203ENST00000443016 SPON1Q9HCB6 807 aa12□□□□□ -0.49
USP6NL-203ENST00000443016 PPP1R1BQ9UD71 204 aaPredicted RBP12□□□□□ -0.49
USP6NL-203ENST00000443016 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
USP6NL-203ENST00000443016 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
USP6NL-203ENST00000443016 MEGF6O75095 1541 aa11.99□□□□□ -0.49
USP6NL-203ENST00000443016 RGPD3A6NKT7 1758 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-203ENST00000443016 RGPD4Q7Z3J3 1758 aa11.99□□□□□ -0.49
USP6NL-203ENST00000443016 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
USP6NL-203ENST00000443016 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
USP6NL-203ENST00000443016 KNSTRNQ9Y448 316 aa11.98□□□□□ -0.49
USP6NL-203ENST00000443016 WASHC2AQ641Q2 1341 aa11.98□□□□□ -0.49
USP6NL-203ENST00000443016 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
USP6NL-203ENST00000443016 RGPD2P0DJD1 1756 aa11.97□□□□□ -0.49
USP6NL-203ENST00000443016 UTRNP46939 3433 aa11.97□□□□□ -0.49
USP6NL-203ENST00000443016 PCDH11XQ9BZA7 1347 aa11.97□□□□□ -0.49
USP6NL-203ENST00000443016 PCDH11YQ9BZA8 1340 aa11.97□□□□□ -0.49
USP6NL-203ENST00000443016 ZBTB7AO95365 584 aa11.96□□□□□ -0.49
USP6NL-203ENST00000443016 MORC1Q86VD1 984 aa11.96□□□□□ -0.49
USP6NL-203ENST00000443016 PDGFDQ9GZP0 370 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-203ENST00000443016 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
USP6NL-203ENST00000443016 EYA1Q99502 592 aa11.95□□□□□ -0.5
USP6NL-203ENST00000443016 NSD2O96028 1365 aa11.94□□□□□ -0.5
USP6NL-203ENST00000443016 BTAF1O14981 1849 aa11.94□□□□□ -0.5
USP6NL-203ENST00000443016 LRRC4BQ9NT99 713 aa11.94□□□□□ -0.5
USP6NL-203ENST00000443016 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
USP6NL-203ENST00000443016 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-203ENST00000443016 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
USP6NL-203ENST00000443016 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
USP6NL-203ENST00000443016 KCNQ4P56696 695 aa11.93□□□□□ -0.5
USP6NL-203ENST00000443016 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
USP6NL-203ENST00000443016 CYP27B1O15528 508 aa11.93□□□□□ -0.5
USP6NL-203ENST00000443016 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
USP6NL-203ENST00000443016 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
USP6NL-203ENST00000443016 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
USP6NL-203ENST00000443016 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-203ENST00000443016 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
USP6NL-203ENST00000443016 ZNF827Q17R98 1081 aa11.91□□□□□ -0.5
USP6NL-203ENST00000443016 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
USP6NL-203ENST00000443016 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
USP6NL-203ENST00000443016 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-203ENST00000443016 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
USP6NL-203ENST00000443016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP6NL-203ENST00000443016 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
USP6NL-203ENST00000443016 MSH5O43196 834 aa11.89□□□□□ -0.51
USP6NL-203ENST00000443016 ANKRD26Q9UPS8 1709 aa11.89□□□□□ -0.51
USP6NL-203ENST00000443016 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
USP6NL-203ENST00000443016 HMGB2P26583 209 aaKnown RBP11.88□□□□□ -0.51
USP6NL-203ENST00000443016 PTGER2P43116 358 aa11.88□□□□□ -0.51
USP6NL-203ENST00000443016 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
USP6NL-203ENST00000443016 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
USP6NL-203ENST00000443016 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
USP6NL-203ENST00000443016 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-203ENST00000443016 TMOD3Q9NYL9 352 aa11.87□□□□□ -0.51
USP6NL-203ENST00000443016 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
USP6NL-203ENST00000443016 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
USP6NL-203ENST00000443016 PHKG2P15735 406 aa11.87□□□□□ -0.51
USP6NL-203ENST00000443016 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-203ENST00000443016 PLEKHO1Q53GL0 409 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-203ENST00000443016 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
USP6NL-203ENST00000443016 PIGBQ92521 554 aa11.86□□□□□ -0.51
USP6NL-203ENST00000443016 POLD1P28340 1107 aa11.86□□□□□ -0.51
USP6NL-203ENST00000443016 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
USP6NL-203ENST00000443016 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
USP6NL-203ENST00000443016 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
USP6NL-203ENST00000443016 MTHFSP49914 203 aa11.85□□□□□ -0.51
USP6NL-203ENST00000443016 AMOTQ4VCS5 1084 aa11.85□□□□□ -0.51
USP6NL-203ENST00000443016 FHDC1Q9C0D6 1143 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-203ENST00000443016 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
USP6NL-203ENST00000443016 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
USP6NL-203ENST00000443016 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
USP6NL-203ENST00000443016 PKD1L3Q7Z443 1732 aa11.84□□□□□ -0.51
USP6NL-203ENST00000443016 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
USP6NL-203ENST00000443016 C1orf141Q5JVX7 400 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms