RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
NR1I3-211ENST00000442691 E9PSI1 815 aa11.92□□□□□ -0.5
NR1I3-211ENST00000442691 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
NR1I3-211ENST00000442691 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NR1I3-211ENST00000442691 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
NR1I3-211ENST00000442691 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
NR1I3-211ENST00000442691 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
NR1I3-211ENST00000442691 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NR1I3-211ENST00000442691 ROBO1Q9Y6N7 1651 aa11.91□□□□□ -0.5
NR1I3-211ENST00000442691 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-211ENST00000442691 FBLN1P23142 703 aa11.9□□□□□ -0.5
NR1I3-211ENST00000442691 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
NR1I3-211ENST00000442691 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
NR1I3-211ENST00000442691 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
NR1I3-211ENST00000442691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-211ENST00000442691 TOM1O60784 492 aa11.89□□□□□ -0.51
NR1I3-211ENST00000442691 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-211ENST00000442691 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
NR1I3-211ENST00000442691 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
NR1I3-211ENST00000442691 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-211ENST00000442691 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
NR1I3-211ENST00000442691 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 ABCA3Q99758 1704 aa11.88□□□□□ -0.51
NR1I3-211ENST00000442691 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-211ENST00000442691 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
NR1I3-211ENST00000442691 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
NR1I3-211ENST00000442691 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-211ENST00000442691 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-211ENST00000442691 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
NR1I3-211ENST00000442691 COL18A1P39060 1754 aa11.87□□□□□ -0.51
NR1I3-211ENST00000442691 SOX12O15370 315 aa11.86□□□□□ -0.51
NR1I3-211ENST00000442691 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
NR1I3-211ENST00000442691 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-211ENST00000442691 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
NR1I3-211ENST00000442691 EYA1Q99502 592 aa11.86□□□□□ -0.51
NR1I3-211ENST00000442691 ERBB3P21860 1342 aa11.86□□□□□ -0.51
NR1I3-211ENST00000442691 NEFLP07196 543 aa11.85□□□□□ -0.51
NR1I3-211ENST00000442691 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
NR1I3-211ENST00000442691 HMOX1P09601 288 aa11.84□□□□□ -0.51
NR1I3-211ENST00000442691 RIPK4P57078 832 aa11.84□□□□□ -0.51
NR1I3-211ENST00000442691 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
NR1I3-211ENST00000442691 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
NR1I3-211ENST00000442691 COL16A1Q07092 1604 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-211ENST00000442691 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
NR1I3-211ENST00000442691 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
NR1I3-211ENST00000442691 KIAA0232Q92628 1395 aa11.82□□□□□ -0.52
NR1I3-211ENST00000442691 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
NR1I3-211ENST00000442691 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
NR1I3-211ENST00000442691 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
NR1I3-211ENST00000442691 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
NR1I3-211ENST00000442691 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
NR1I3-211ENST00000442691 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-211ENST00000442691 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 GNAI1P63096 354 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
NR1I3-211ENST00000442691 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 LRRC37A3O60309 1634 aa11.81□□□□□ -0.52
NR1I3-211ENST00000442691 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
NR1I3-211ENST00000442691 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-211ENST00000442691 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
NR1I3-211ENST00000442691 PRDM11Q9NQV5 511 aa11.8□□□□□ -0.52
NR1I3-211ENST00000442691 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
NR1I3-211ENST00000442691 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-211ENST00000442691 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
NR1I3-211ENST00000442691 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
NR1I3-211ENST00000442691 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
NR1I3-211ENST00000442691 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
NR1I3-211ENST00000442691 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
NR1I3-211ENST00000442691 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
NR1I3-211ENST00000442691 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
NR1I3-211ENST00000442691 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
NR1I3-211ENST00000442691 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
NR1I3-211ENST00000442691 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-211ENST00000442691 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
NR1I3-211ENST00000442691 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-211ENST00000442691 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NR1I3-211ENST00000442691 PLEKHO1Q53GL0 409 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-211ENST00000442691 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
NR1I3-211ENST00000442691 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
NR1I3-211ENST00000442691 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
NR1I3-211ENST00000442691 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
NR1I3-211ENST00000442691 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
NR1I3-211ENST00000442691 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
NR1I3-211ENST00000442691 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
NR1I3-211ENST00000442691 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
NR1I3-211ENST00000442691 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
NR1I3-211ENST00000442691 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
NR1I3-211ENST00000442691 CRB1P82279 1406 aa11.76□□□□□ -0.53
NR1I3-211ENST00000442691 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
NR1I3-211ENST00000442691 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms