RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
TTC28-203ENST00000442232 INSRP06213 1382 aa16.31■□□□□ 0.2
TTC28-203ENST00000442232 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
TTC28-203ENST00000442232 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
TTC28-203ENST00000442232 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
TTC28-203ENST00000442232 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
TTC28-203ENST00000442232 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
TTC28-203ENST00000442232 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
TTC28-203ENST00000442232 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
TTC28-203ENST00000442232 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
TTC28-203ENST00000442232 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
TTC28-203ENST00000442232 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
TTC28-203ENST00000442232 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
TTC28-203ENST00000442232 MAP2P11137 1827 aaKnown RBP16.28■□□□□ 0.2
TTC28-203ENST00000442232 LY75O60449 1722 aa16.28■□□□□ 0.2
TTC28-203ENST00000442232 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
TTC28-203ENST00000442232 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
TTC28-203ENST00000442232 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.2
TTC28-203ENST00000442232 HSP90AB2PQ58FF8 381 aa16.27■□□□□ 0.2
TTC28-203ENST00000442232 PDGFDQ9GZP0 370 aaPredicted RBP16.27■□□□□ 0.2
TTC28-203ENST00000442232 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
TTC28-203ENST00000442232 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.19
TTC28-203ENST00000442232 CARD14Q9BXL6 1004 aa16.26■□□□□ 0.19
TTC28-203ENST00000442232 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
TTC28-203ENST00000442232 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
TTC28-203ENST00000442232 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
TTC28-203ENST00000442232 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
TTC28-203ENST00000442232 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
TTC28-203ENST00000442232 PTGER2P43116 358 aa16.23■□□□□ 0.19
TTC28-203ENST00000442232 YY1P25490 414 aa16.22■□□□□ 0.19
TTC28-203ENST00000442232 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
TTC28-203ENST00000442232 TFCP2L1Q9NZI6 479 aa16.22■□□□□ 0.19
TTC28-203ENST00000442232 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
TTC28-203ENST00000442232 NSD2O96028 1365 aa16.22■□□□□ 0.19
TTC28-203ENST00000442232 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
TTC28-203ENST00000442232 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
TTC28-203ENST00000442232 ITGB4P16144 1822 aa16.2■□□□□ 0.18
TTC28-203ENST00000442232 POLD1P28340 1107 aa16.2■□□□□ 0.18
TTC28-203ENST00000442232 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
TTC28-203ENST00000442232 ARXQ96QS3 562 aa16.2■□□□□ 0.18
TTC28-203ENST00000442232 C5P01031 1676 aa16.2■□□□□ 0.18
TTC28-203ENST00000442232 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
TTC28-203ENST00000442232 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
TTC28-203ENST00000442232 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
TTC28-203ENST00000442232 TNNT2P45379 298 aaPredicted RBP16.18■□□□□ 0.18
TTC28-203ENST00000442232 TOGARAM1Q9Y4F4 1720 aa16.18■□□□□ 0.18
TTC28-203ENST00000442232 PNPLA7Q6ZV29 1317 aa16.18■□□□□ 0.18
TTC28-203ENST00000442232 MSH5O43196 834 aa16.17■□□□□ 0.18
TTC28-203ENST00000442232 KCNQ4P56696 695 aa16.17■□□□□ 0.18
TTC28-203ENST00000442232 SGIP1Q9BQI5 828 aa16.17■□□□□ 0.18
TTC28-203ENST00000442232 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
TTC28-203ENST00000442232 NCAPD2Q15021 1401 aa16.17■□□□□ 0.18
TTC28-203ENST00000442232 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
TTC28-203ENST00000442232 PALLDQ8WX93 1383 aa16.16■□□□□ 0.18
TTC28-203ENST00000442232 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
TTC28-203ENST00000442232 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
TTC28-203ENST00000442232 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
TTC28-203ENST00000442232 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
TTC28-203ENST00000442232 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
TTC28-203ENST00000442232 CYP27B1O15528 508 aa16.15■□□□□ 0.18
TTC28-203ENST00000442232 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
TTC28-203ENST00000442232 EYA1Q99502 592 aa16.14■□□□□ 0.17
TTC28-203ENST00000442232 PANK3Q9H999 370 aa16.14■□□□□ 0.17
TTC28-203ENST00000442232 CHD4Q14839 1912 aa16.13■□□□□ 0.17
TTC28-203ENST00000442232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
TTC28-203ENST00000442232 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
TTC28-203ENST00000442232 EIF4A2Q14240 407 aaKnown RBP16.12■□□□□ 0.17
TTC28-203ENST00000442232 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
TTC28-203ENST00000442232 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
TTC28-203ENST00000442232 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
TTC28-203ENST00000442232 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
TTC28-203ENST00000442232 IFNL2Q8IZJ0 200 aa16.11■□□□□ 0.17
TTC28-203ENST00000442232 AK7Q96M32 723 aa16.11■□□□□ 0.17
TTC28-203ENST00000442232 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
TTC28-203ENST00000442232 NKX1-1Q15270 411 aaPredicted RBP16.1■□□□□ 0.17
TTC28-203ENST00000442232 GPR162Q16538 588 aa16.09■□□□□ 0.17
TTC28-203ENST00000442232 PIGBQ92521 554 aa16.09■□□□□ 0.17
TTC28-203ENST00000442232 PHKG2P15735 406 aa16.08■□□□□ 0.16
TTC28-203ENST00000442232 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
TTC28-203ENST00000442232 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
TTC28-203ENST00000442232 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
TTC28-203ENST00000442232 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
TTC28-203ENST00000442232 MSL1Q68DK7 614 aa16.07■□□□□ 0.16
TTC28-203ENST00000442232 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
TTC28-203ENST00000442232 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
TTC28-203ENST00000442232 LOC102724428A0A0B4J2F2 783 aa16.05■□□□□ 0.16
TTC28-203ENST00000442232 SIK1P57059 783 aa16.05■□□□□ 0.16
TTC28-203ENST00000442232 PHF14O94880 888 aa16.04■□□□□ 0.16
TTC28-203ENST00000442232 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
TTC28-203ENST00000442232 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
TTC28-203ENST00000442232 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
TTC28-203ENST00000442232 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
TTC28-203ENST00000442232 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
TTC28-203ENST00000442232 SSFA2P28290 1259 aa16.02■□□□□ 0.16
TTC28-203ENST00000442232 DCAF5Q96JK2 942 aa16.02■□□□□ 0.16
TTC28-203ENST00000442232 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.16
TTC28-203ENST00000442232 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
TTC28-203ENST00000442232 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
TTC28-203ENST00000442232 ZNF831Q5JPB2 1677 aa16■□□□□ 0.15
TTC28-203ENST00000442232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms