RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
SLC48A1-201ENST00000442218 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
SLC48A1-201ENST00000442218 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
SLC48A1-201ENST00000442218 PNNQ9H307 717 aaKnown RBP16.3■□□□□ 0.2
SLC48A1-201ENST00000442218 PNPLA6Q8IY17 1366 aa16.3■□□□□ 0.2
SLC48A1-201ENST00000442218 ATP7BP35670 1465 aa16.3■□□□□ 0.2
SLC48A1-201ENST00000442218 GNAI1P63096 354 aa16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 IL16Q14005 1332 aa16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 MCTP1Q6DN14 999 aa16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
SLC48A1-201ENST00000442218 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
SLC48A1-201ENST00000442218 MEIS3Q99687 375 aa16.28■□□□□ 0.2
SLC48A1-201ENST00000442218 ACEP12821 1306 aa16.28■□□□□ 0.2
SLC48A1-201ENST00000442218 KCNA6P17658 529 aa16.28■□□□□ 0.2
SLC48A1-201ENST00000442218 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
SLC48A1-201ENST00000442218 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
SLC48A1-201ENST00000442218 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
SLC48A1-201ENST00000442218 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.2
SLC48A1-201ENST00000442218 DDX49Q9Y6V7 483 aaKnown RBP16.27■□□□□ 0.2
SLC48A1-201ENST00000442218 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
SLC48A1-201ENST00000442218 MRE11P49959 708 aa16.26■□□□□ 0.19
SLC48A1-201ENST00000442218 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
SLC48A1-201ENST00000442218 GBP4Q96PP9 640 aa16.26■□□□□ 0.19
SLC48A1-201ENST00000442218 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
SLC48A1-201ENST00000442218 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
SLC48A1-201ENST00000442218 CDC45O75419 566 aa16.25■□□□□ 0.19
SLC48A1-201ENST00000442218 RAB3GAP1Q15042 981 aa16.25■□□□□ 0.19
SLC48A1-201ENST00000442218 TRIM44Q96DX7 344 aaPredicted RBP16.25■□□□□ 0.19
SLC48A1-201ENST00000442218 SETD1BQ9UPS6 1966 aaKnown RBP16.25■□□□□ 0.19
SLC48A1-201ENST00000442218 G2E3Q7L622 706 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 RBM27Q9P2N5 1060 aaKnown RBP16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 CDC42BPGQ6DT37 1551 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 DDIT3P35638 169 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
SLC48A1-201ENST00000442218 DIP2AQ14689 1571 aa16.23■□□□□ 0.19
SLC48A1-201ENST00000442218 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
SLC48A1-201ENST00000442218 SDSP20132 328 aa16.23■□□□□ 0.19
SLC48A1-201ENST00000442218 ZNF142P52746 1687 aaPredicted RBP16.22■□□□□ 0.19
SLC48A1-201ENST00000442218 MPNDQ8N594 471 aa16.22■□□□□ 0.19
SLC48A1-201ENST00000442218 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
SLC48A1-201ENST00000442218 SNX21Q969T3 373 aa16.22■□□□□ 0.19
SLC48A1-201ENST00000442218 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
SLC48A1-201ENST00000442218 ABCC4O15439 1325 aa16.22■□□□□ 0.19
SLC48A1-201ENST00000442218 TTC21BQ7Z4L5 1316 aa16.21■□□□□ 0.19
SLC48A1-201ENST00000442218 BAG4O95429 457 aaKnown RBP16.21■□□□□ 0.19
SLC48A1-201ENST00000442218 ESPNB1AK53 854 aa16.21■□□□□ 0.18
SLC48A1-201ENST00000442218 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
SLC48A1-201ENST00000442218 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
SLC48A1-201ENST00000442218 MSH6P52701 1360 aa16.2■□□□□ 0.18
SLC48A1-201ENST00000442218 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
SLC48A1-201ENST00000442218 TTC22Q5TAA0 569 aa16.2■□□□□ 0.18
SLC48A1-201ENST00000442218 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
SLC48A1-201ENST00000442218 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 PRPF40AO75400 957 aaKnown RBP16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 LARP6Q9BRS8 491 aaKnown RBP16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 NGDNQ8NEJ9 315 aaKnown RBP16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 ARID3AQ99856 593 aa16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
SLC48A1-201ENST00000442218 TOPAZ1Q8N9V7 1692 aa16.18■□□□□ 0.18
SLC48A1-201ENST00000442218 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 RILPL2Q969X0 211 aa16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 USP26Q9BXU7 913 aa16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 RNF214Q8ND24 703 aa16.17■□□□□ 0.18
SLC48A1-201ENST00000442218 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
SLC48A1-201ENST00000442218 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
SLC48A1-201ENST00000442218 NCOA3Q9Y6Q9 1424 aa16.16■□□□□ 0.18
SLC48A1-201ENST00000442218 GOLGA6L22H0YM25 854 aa16.16■□□□□ 0.18
SLC48A1-201ENST00000442218 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
SLC48A1-201ENST00000442218 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 GDPD2Q9HCC8 539 aa16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 USP6P35125 1406 aa16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 CLCN1P35523 988 aa16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 TSPYL4Q9UJ04 414 aa16.15■□□□□ 0.18
SLC48A1-201ENST00000442218 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.18
SLC48A1-201ENST00000442218 AMPHP49418 695 aa16.14■□□□□ 0.17
SLC48A1-201ENST00000442218 NEK4P51957 841 aa16.14■□□□□ 0.17
SLC48A1-201ENST00000442218 NLRP6P59044 892 aa16.14■□□□□ 0.17
SLC48A1-201ENST00000442218 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
SLC48A1-201ENST00000442218 IL1RAPL2Q9NP60 686 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms