RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 GLYCTKQ8IVS8 523 aa6.36□□□□□ -1.39
CDC42BPA-207ENST00000441725 TPCN2Q8NHX9 752 aa6.36□□□□□ -1.39
CDC42BPA-207ENST00000441725 EIF5BO60841 1220 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 MSS51Q4VC12 460 aa6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 SH3BP5LQ7L8J4 393 aa6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 SEPT3Q9UH03 358 aa6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 MAPK1P28482 360 aa6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 DZIP3Q86Y13 1208 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 CARD14Q9BXL6 1004 aa6.35□□□□□ -1.39
CDC42BPA-207ENST00000441725 MMP16P51512 607 aa6.34□□□□□ -1.39
CDC42BPA-207ENST00000441725 CAPN12Q6ZSI9 719 aa6.34□□□□□ -1.39
CDC42BPA-207ENST00000441725 GTF3C2Q8WUA4 911 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-207ENST00000441725 MKNK1Q9BUB5 465 aa6.34□□□□□ -1.39
CDC42BPA-207ENST00000441725 PCDHGA11Q9Y5H2 935 aa6.34□□□□□ -1.39
CDC42BPA-207ENST00000441725 MAGEB6P1A0A0J9YX57 407 aa6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 C21orf2O43822 256 aa6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 GIGYF1O75420 1035 aaPredicted RBP6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 RECKO95980 971 aa6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 SPSB2Q99619 263 aa6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 UNC93B1Q9H1C4 597 aa6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 DNMT3AQ9Y6K1 912 aaPredicted RBP6.34□□□□□ -1.4
CDC42BPA-207ENST00000441725 VAMP1P23763 118 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 ARHGAP4P98171 946 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 PSME1Q06323 249 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 ASB16Q96NS5 453 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 KCNC4Q03721 635 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 PTCRAQ6ISU1 281 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 SH3RF1Q7Z6J0 888 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 HINFPQ9BQA5 517 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 DCTN4Q9UJW0 460 aa6.33□□□□□ -1.4
CDC42BPA-207ENST00000441725 TJAP1Q5JTD0 557 aa6.32□□□□□ -1.4
CDC42BPA-207ENST00000441725 PURBQ96QR8 312 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-207ENST00000441725 MTRQ99707 1265 aa6.32□□□□□ -1.4
CDC42BPA-207ENST00000441725 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-207ENST00000441725 TSEN2Q8NCE0 465 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-207ENST00000441725 WEE1P30291 646 aa6.31□□□□□ -1.4
CDC42BPA-207ENST00000441725 FKBP4Q02790 459 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDC42BPA-207ENST00000441725 GAS2L2Q8NHY3 880 aa6.31□□□□□ -1.4
CDC42BPA-207ENST00000441725 IL21Q9HBE4 155 aa6.31□□□□□ -1.4
CDC42BPA-207ENST00000441725 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
CDC42BPA-207ENST00000441725 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
CDC42BPA-207ENST00000441725 A0A0G2JS52 829 aa6.3□□□□□ -1.4
CDC42BPA-207ENST00000441725 COPS2P61201 443 aa6.3□□□□□ -1.4
CDC42BPA-207ENST00000441725 TSNAXIP1Q2TAA8 658 aa6.3□□□□□ -1.4
CDC42BPA-207ENST00000441725 CCDC24Q8N4L8 307 aa6.3□□□□□ -1.4
CDC42BPA-207ENST00000441725 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-207ENST00000441725 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
CDC42BPA-207ENST00000441725 ZSCAN29Q8IWY8 852 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-207ENST00000441725 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-207ENST00000441725 TLL1O43897 1013 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 USP4Q13107 963 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 RGL4Q8IZJ4 473 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 SREK1Q8WXA9 508 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 DRC1Q96MC2 740 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 PCDHB11Q9Y5F2 797 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 ZC3H6P61129 1189 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 NAA30Q147X3 362 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 RNF20Q5VTR2 975 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 FOXJ1Q92949 421 aa6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 PUS7Q96PZ0 661 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-207ENST00000441725 HSP90B1P14625 803 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 AGERQ15109 404 aa6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 EAPPQ56P03 285 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 BAP1Q92560 729 aa6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 ZNF516Q92618 1163 aa6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 SLC10A4Q96EP9 437 aa6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 BACH2Q9BYV9 841 aa6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 PTCD1O75127 700 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 BPHLQ86WA6 291 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDC42BPA-207ENST00000441725 COL19A1Q14993 1142 aa6.26□□□□□ -1.41
CDC42BPA-207ENST00000441725 NBPF20Q3BBV1 942 aa6.26□□□□□ -1.41
CDC42BPA-207ENST00000441725 LINC01559Q495D7 138 aa6.26□□□□□ -1.41
CDC42BPA-207ENST00000441725 HELQQ8TDG4 1101 aa6.26□□□□□ -1.41
CDC42BPA-207ENST00000441725 ESPNB1AK53 854 aa6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 M0R2N6 131 aa6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 ZPR1O75312 459 aa6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 P4HBP07237 508 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 HMGB1P09429 215 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 NAALADL2Q58DX5 795 aa6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 TMC7Q7Z402 723 aa6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 MRPL58Q14197 206 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 ZNF511Q8NB15 262 aa6.25□□□□□ -1.41
CDC42BPA-207ENST00000441725 SCTRP47872 440 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 ZNF358Q9NW07 568 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 ADH1BP00325 375 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 RAB15P59190 212 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 CCDC125Q86Z20 511 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 NKX2-3Q8TAU0 364 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 COL26A1Q96A83 441 aa6.24□□□□□ -1.41
CDC42BPA-207ENST00000441725 TMEM229AB2RXF0 380 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 NPR3P17342 541 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 MPSTP25325 297 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 ERCC5P28715 1186 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 LDLRAD1Q5T700 205 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 C9orf131Q5VYM1 1079 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 SEPT12Q8IYM1 358 aa6.23□□□□□ -1.41
CDC42BPA-207ENST00000441725 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms