RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 NOD1Q9Y239 953 aa7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 HDGFP51858 240 aaKnown RBP7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 MCCD1P59942 119 aaPredicted RBP7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 ZNF662Q6ZS27 426 aa7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 FAM9BQ8IZU0 186 aa7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 LNPKQ9C0E8 428 aa7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 ECM1Q16610 540 aa7.71□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 NT5DC4Q86YG4 428 aa7.71□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TMEM87AQ8NBN3 555 aa7.71□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 PRKAG2Q9UGJ0 569 aa7.71□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ABCC8Q09428 1581 aa7.71□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ATP2B1P20020 1258 aa7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 RAD51AP2Q09MP3 1159 aa7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SIX5Q8N196 739 aa7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 DEKP35659 375 aaKnown RBP7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 XPCQ01831 940 aaPredicted RBP7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 FOXD4L6Q3SYB3 417 aaPredicted RBP7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ARSIQ5FYB1 569 aa7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 FOXD4L3Q6VB84 417 aaPredicted RBP7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SGSM3Q96HU1 749 aa7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 PCDHB9Q9Y5E1 797 aa7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 P4HBP07237 508 aaKnown RBP7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ITGAEP38570 1179 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 MTMR3Q13615 1198 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SEPT3Q9UH03 358 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 CFHP08603 1231 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 PROX2Q3B8N5 592 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TRAF7Q6Q0C0 670 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 MICAL1Q8TDZ2 1067 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 MKNK1Q9BUB5 465 aa7.69□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ATAD2BQ9ULI0 1458 aa7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 DKK1O94907 266 aa7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 GTF2F1P35269 517 aaKnown RBP eCLIP7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 PTK2Q05397 1052 aa7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 DHX38Q92620 1227 aaKnown RBP7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 CHIC2Q9UKJ5 165 aa7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 KIAA1024Q9UPX6 916 aa7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TLDC2A0PJX2 215 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 PSDA5PKW4 1024 aaPredicted RBP7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 HMGB1P1B2RPK0 211 aaPredicted RBP7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ZBTB7BO15156 539 aaPredicted RBP7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 Q3C1V9 767 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 LDLRAD1Q5T700 205 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 POTEGQ6S5H5 508 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 HINFPQ9BQA5 517 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TINF2Q9BSI4 451 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 CCSER2Q9H7U1 834 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 CAPN10Q9HC96 672 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 NLRP2Q9NX02 1062 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 BAZ1BQ9UIG0 1483 aaKnown RBP7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 RALBP1Q15311 655 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 METTL16Q86W50 562 aaKnown RBP7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 GPSM3Q9Y4H4 160 aa7.67□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 GNL2Q13823 731 aaKnown RBP7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 APBB1IPQ7Z5R6 666 aaPredicted RBP7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 FTSJ3Q8IY81 847 aaKnown RBP7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 RNF34Q969K3 372 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TGIF2Q9GZN2 237 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 KIAA1468Q9P260 1216 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 PTCD1O75127 700 aaKnown RBP7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 GTF2IP78347 998 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 CCDC144BQ3MJ40 725 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TMC7Q7Z402 723 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 MAP10Q9P2G4 905 aa7.66□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SFI1A8K8P3 1242 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 F12P00748 615 aaPredicted RBP7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TSGA10IPQ3SY00 556 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 TPCN2Q8NHX9 752 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SLC39A7Q92504 469 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 ARMC5Q96C12 935 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 FAM161BQ96MY7 647 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 RBCK1Q9BYM8 510 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 SBNO2Q9Y2G9 1366 aa7.65□□□□□ -1.18
ALMS1-IT1-201ENST00000441587 EEA1Q15075 1411 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 POTEFA5A3E0 1075 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 FAM193AP78312 1265 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PSME1Q06323 249 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 METTL5Q9NRN9 209 aaKnown RBP7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 SLC52A1Q9NWF4 448 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PARP2Q9UGN5 583 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 KCNG1Q9UIX4 513 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 DOLKQ9UPQ8 538 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 RIMBP2O15034 1052 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 SORBS3O60504 671 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms