RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
LYSMD1-202ENST00000440902 MEGF6O75095 1541 aa11.31□□□□□ -0.6
LYSMD1-202ENST00000440902 HOXC9P31274 260 aa11.31□□□□□ -0.6
LYSMD1-202ENST00000440902 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
LYSMD1-202ENST00000440902 ARXQ96QS3 562 aa11.31□□□□□ -0.6
LYSMD1-202ENST00000440902 COL24A1Q17RW2 1714 aa11.31□□□□□ -0.6
LYSMD1-202ENST00000440902 KCNQ4P56696 695 aa11.3□□□□□ -0.6
LYSMD1-202ENST00000440902 ANKRD36BQ8N2N9 1353 aa11.29□□□□□ -0.6
LYSMD1-202ENST00000440902 RRS1Q15050 365 aaKnown RBP11.29□□□□□ -0.6
LYSMD1-202ENST00000440902 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
LYSMD1-202ENST00000440902 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
LYSMD1-202ENST00000440902 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 NSD2O96028 1365 aa11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 C5P01031 1676 aa11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 ZNF784Q8NCA9 323 aaPredicted RBP11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 PNPLA7Q6ZV29 1317 aa11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
LYSMD1-202ENST00000440902 SMG6Q86US8 1419 aaKnown RBP11.27□□□□□ -0.6
LYSMD1-202ENST00000440902 GGNBP2Q9H3C7 697 aa11.27□□□□□ -0.61
LYSMD1-202ENST00000440902 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.61
LYSMD1-202ENST00000440902 TAF1LQ8IZX4 1826 aa11.27□□□□□ -0.61
LYSMD1-202ENST00000440902 USP47Q96K76 1375 aa11.27□□□□□ -0.61
LYSMD1-202ENST00000440902 ITGB4P16144 1822 aa11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 POLD1P28340 1107 aa11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 GPR162Q16538 588 aa11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 SLC16A10Q8TF71 515 aa11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
LYSMD1-202ENST00000440902 FYB1O15117 783 aa11.25□□□□□ -0.61
LYSMD1-202ENST00000440902 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
LYSMD1-202ENST00000440902 TMF1P82094 1093 aa11.25□□□□□ -0.61
LYSMD1-202ENST00000440902 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
LYSMD1-202ENST00000440902 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
LYSMD1-202ENST00000440902 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
LYSMD1-202ENST00000440902 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
LYSMD1-202ENST00000440902 TATP17735 454 aaPredicted RBP11.24□□□□□ -0.61
LYSMD1-202ENST00000440902 RAPGEF4Q8WZA2 1011 aa11.24□□□□□ -0.61
LYSMD1-202ENST00000440902 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
LYSMD1-202ENST00000440902 INSRP06213 1382 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 FLT4P35916 1363 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 HSP90AB2PQ58FF8 381 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 PCDH11XQ9BZA7 1347 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 PCDH11YQ9BZA8 1340 aa11.22□□□□□ -0.61
LYSMD1-202ENST00000440902 C4BP0C0L5 1744 aa11.21□□□□□ -0.61
LYSMD1-202ENST00000440902 NSD3Q9BZ95 1437 aa11.21□□□□□ -0.61
LYSMD1-202ENST00000440902 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
LYSMD1-202ENST00000440902 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
LYSMD1-202ENST00000440902 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
LYSMD1-202ENST00000440902 UBR3Q6ZT12 1888 aa11.2□□□□□ -0.62
LYSMD1-202ENST00000440902 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
LYSMD1-202ENST00000440902 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
LYSMD1-202ENST00000440902 MPRIPQ6WCQ1 1025 aa11.19□□□□□ -0.62
LYSMD1-202ENST00000440902 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
LYSMD1-202ENST00000440902 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
LYSMD1-202ENST00000440902 CYP27B1O15528 508 aa11.18□□□□□ -0.62
LYSMD1-202ENST00000440902 YBX3P16989 372 aaKnown RBP eCLIP11.17□□□□□ -0.62
LYSMD1-202ENST00000440902 C1QTNF8P60827 252 aa11.17□□□□□ -0.62
LYSMD1-202ENST00000440902 CARD14Q9BXL6 1004 aa11.17□□□□□ -0.62
LYSMD1-202ENST00000440902 NCAPD2Q15021 1401 aa11.16□□□□□ -0.62
LYSMD1-202ENST00000440902 GIGYF1O75420 1035 aaPredicted RBP11.15□□□□□ -0.62
LYSMD1-202ENST00000440902 PHF14O94880 888 aa11.15□□□□□ -0.62
LYSMD1-202ENST00000440902 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
LYSMD1-202ENST00000440902 FLAD1Q8NFF5 587 aa11.15□□□□□ -0.62
LYSMD1-202ENST00000440902 AK7Q96M32 723 aa11.15□□□□□ -0.62
LYSMD1-202ENST00000440902 POLR3GLQ9BT43 218 aa11.15□□□□□ -0.62
LYSMD1-202ENST00000440902 SMIM5Q71RC9 77 aa11.14□□□□□ -0.63
LYSMD1-202ENST00000440902 PIGBQ92521 554 aa11.14□□□□□ -0.63
LYSMD1-202ENST00000440902 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
LYSMD1-202ENST00000440902 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
LYSMD1-202ENST00000440902 GRIN3BO60391 1043 aa11.13□□□□□ -0.63
LYSMD1-202ENST00000440902 AMIGO3Q86WK7 504 aa11.13□□□□□ -0.63
LYSMD1-202ENST00000440902 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 EYA1Q99502 592 aa11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 TMOD3Q9NYL9 352 aa11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 CD2APQ9Y5K6 639 aa11.12□□□□□ -0.63
LYSMD1-202ENST00000440902 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
LYSMD1-202ENST00000440902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
LYSMD1-202ENST00000440902 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
LYSMD1-202ENST00000440902 SIK1P57059 783 aa11.11□□□□□ -0.63
LYSMD1-202ENST00000440902 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
LYSMD1-202ENST00000440902 LINC00116Q8NCU8 138 aa11.11□□□□□ -0.63
LYSMD1-202ENST00000440902 UTRNP46939 3433 aa11.1□□□□□ -0.63
LYSMD1-202ENST00000440902 PHKG2P15735 406 aa11.1□□□□□ -0.63
LYSMD1-202ENST00000440902 POLKQ9UBT6 870 aa11.1□□□□□ -0.63
LYSMD1-202ENST00000440902 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
LYSMD1-202ENST00000440902 N4BP2Q86UW6 1770 aaPredicted RBP11.1□□□□□ -0.63
LYSMD1-202ENST00000440902 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 COL5A3P25940 1745 aaPredicted RBP11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 GNPATO15228 680 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms