RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 MEGF6O75095 1541 aa21.38■■□□□ 1.01
UBE2F-214ENST00000440223 BCL9O00512 1426 aa21.38■■□□□ 1.01
UBE2F-214ENST00000440223 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
UBE2F-214ENST00000440223 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
UBE2F-214ENST00000440223 MARCH10Q8NA82 808 aaPredicted RBP21.37■■□□□ 1.01
UBE2F-214ENST00000440223 RAPGEF4Q8WZA2 1011 aa21.37■■□□□ 1.01
UBE2F-214ENST00000440223 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
UBE2F-214ENST00000440223 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
UBE2F-214ENST00000440223 TRIM37O94972 964 aa21.36■■□□□ 1.01
UBE2F-214ENST00000440223 MTHFSP49914 203 aa21.35■■□□□ 1.01
UBE2F-214ENST00000440223 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
UBE2F-214ENST00000440223 PNISRQ8TF01 805 aaKnown RBP21.35■■□□□ 1.01
UBE2F-214ENST00000440223 TATP17735 454 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-214ENST00000440223 NHSQ6T4R5 1651 aa21.33■■□□□ 1
UBE2F-214ENST00000440223 PKD1L3Q7Z443 1732 aa21.32■■□□□ 1
UBE2F-214ENST00000440223 DEFB132Q7Z7B7 95 aa21.32■■□□□ 1
UBE2F-214ENST00000440223 EYA1Q99502 592 aa21.32■■□□□ 1
UBE2F-214ENST00000440223 ZCRB1Q8TBF4 217 aaKnown RBP21.31■■□□□ 1
UBE2F-214ENST00000440223 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
UBE2F-214ENST00000440223 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
UBE2F-214ENST00000440223 CENPBP07199 599 aaPredicted RBP21.3■■□□□ 1
UBE2F-214ENST00000440223 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
UBE2F-214ENST00000440223 PLEKHG2Q9H7P9 1386 aa21.29■■□□□ 1
UBE2F-214ENST00000440223 APBA3O96018 575 aa21.29■■□□□ 1
UBE2F-214ENST00000440223 DDX54Q8TDD1 881 aaKnown RBP21.29■■□□□ 1
UBE2F-214ENST00000440223 NUDCQ9Y266 331 aa21.29■■□□□ 1
UBE2F-214ENST00000440223 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
UBE2F-214ENST00000440223 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
UBE2F-214ENST00000440223 DOT1LQ8TEK3 1739 aa21.28■■□□□ 1
UBE2F-214ENST00000440223 PCDH11XQ9BZA7 1347 aa21.28■■□□□ 1
UBE2F-214ENST00000440223 PCDH11YQ9BZA8 1340 aa21.28■■□□□ 1
UBE2F-214ENST00000440223 RREB1Q92766 1687 aa21.27■■□□□ 1
UBE2F-214ENST00000440223 EN1Q05925 392 aaPredicted RBP21.26■□□□□ 0.99
UBE2F-214ENST00000440223 HNRNPUQ00839 825 aaKnown RBP eCLIP21.25■□□□□ 0.99
UBE2F-214ENST00000440223 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
UBE2F-214ENST00000440223 DIAPH1O60610 1272 aaKnown RBP21.24■□□□□ 0.99
UBE2F-214ENST00000440223 SPG7Q9UQ90 795 aa21.24■□□□□ 0.99
UBE2F-214ENST00000440223 BTAF1O14981 1849 aa21.23■□□□□ 0.99
UBE2F-214ENST00000440223 IL13P35225 146 aa21.23■□□□□ 0.99
UBE2F-214ENST00000440223 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
UBE2F-214ENST00000440223 EZH2Q15910 746 aaKnown RBP21.22■□□□□ 0.99
UBE2F-214ENST00000440223 CAMKK2Q96RR4 588 aa21.22■□□□□ 0.99
UBE2F-214ENST00000440223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.22■□□□□ 0.99
UBE2F-214ENST00000440223 NUP188Q5SRE5 1749 aa21.21■□□□□ 0.99
UBE2F-214ENST00000440223 PLSCR1O15162 318 aa21.2■□□□□ 0.98
UBE2F-214ENST00000440223 KDRP35968 1356 aa21.2■□□□□ 0.98
UBE2F-214ENST00000440223 KCNQ2O43526 872 aa21.19■□□□□ 0.98
UBE2F-214ENST00000440223 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
UBE2F-214ENST00000440223 U2SURPO15042 1029 aaKnown RBP21.18■□□□□ 0.98
UBE2F-214ENST00000440223 U2AF1L5P0DN76 240 aaPredicted RBP21.18■□□□□ 0.98
UBE2F-214ENST00000440223 U2AF1Q01081 240 aaKnown RBP eCLIP21.18■□□□□ 0.98
UBE2F-214ENST00000440223 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
UBE2F-214ENST00000440223 PTF1AQ7RTS3 328 aa21.18■□□□□ 0.98
UBE2F-214ENST00000440223 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
UBE2F-214ENST00000440223 CYP27B1O15528 508 aa21.17■□□□□ 0.98
UBE2F-214ENST00000440223 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
UBE2F-214ENST00000440223 ZBED9Q6R2W3 1325 aa21.16■□□□□ 0.98
UBE2F-214ENST00000440223 AMOTQ4VCS5 1084 aa21.16■□□□□ 0.98
UBE2F-214ENST00000440223 AEBP1Q8IUX7 1158 aa21.16■□□□□ 0.98
UBE2F-214ENST00000440223 SYTL4Q96C24 671 aaPredicted RBP21.16■□□□□ 0.98
UBE2F-214ENST00000440223 PLEKHO1Q53GL0 409 aaPredicted RBP21.15■□□□□ 0.98
UBE2F-214ENST00000440223 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
UBE2F-214ENST00000440223 ITGB4P16144 1822 aa21.15■□□□□ 0.98
UBE2F-214ENST00000440223 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.97
UBE2F-214ENST00000440223 NEFMP07197 916 aa21.13■□□□□ 0.97
UBE2F-214ENST00000440223 PHKG2P15735 406 aa21.13■□□□□ 0.97
UBE2F-214ENST00000440223 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
UBE2F-214ENST00000440223 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
UBE2F-214ENST00000440223 HMOX1P09601 288 aa21.11■□□□□ 0.97
UBE2F-214ENST00000440223 NBPF14Q5TI25 921 aa21.11■□□□□ 0.97
UBE2F-214ENST00000440223 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
UBE2F-214ENST00000440223 NGEFQ8N5V2 710 aa21.11■□□□□ 0.97
UBE2F-214ENST00000440223 RUNDC1Q96C34 613 aa21.11■□□□□ 0.97
UBE2F-214ENST00000440223 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
UBE2F-214ENST00000440223 LY75O60449 1722 aa21.1■□□□□ 0.97
UBE2F-214ENST00000440223 TXNRD1Q16881 649 aa21.1■□□□□ 0.97
UBE2F-214ENST00000440223 C1orf141Q5JVX7 400 aa21.1■□□□□ 0.97
UBE2F-214ENST00000440223 FCHSD2O94868 740 aa21.08■□□□□ 0.97
UBE2F-214ENST00000440223 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.97
UBE2F-214ENST00000440223 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
UBE2F-214ENST00000440223 DCAF5Q96JK2 942 aa21.06■□□□□ 0.96
UBE2F-214ENST00000440223 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
UBE2F-214ENST00000440223 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
UBE2F-214ENST00000440223 PROM2Q8N271 834 aa21.05■□□□□ 0.96
UBE2F-214ENST00000440223 TMOD3Q9NYL9 352 aa21.05■□□□□ 0.96
UBE2F-214ENST00000440223 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
UBE2F-214ENST00000440223 PSDA5PKW4 1024 aaPredicted RBP21.04■□□□□ 0.96
UBE2F-214ENST00000440223 R3HDM1Q15032 1099 aaKnown RBP21.04■□□□□ 0.96
UBE2F-214ENST00000440223 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
UBE2F-214ENST00000440223 DLG5Q8TDM6 1919 aa21.04■□□□□ 0.96
UBE2F-214ENST00000440223 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
UBE2F-214ENST00000440223 AKAP4Q5JQC9 854 aa21.03■□□□□ 0.96
UBE2F-214ENST00000440223 ERVV-2B6SEH9 535 aa21.02■□□□□ 0.96
UBE2F-214ENST00000440223 APAF1O14727 1248 aa21.02■□□□□ 0.96
UBE2F-214ENST00000440223 SMARCC1Q92922 1105 aaPredicted RBP21.02■□□□□ 0.96
UBE2F-214ENST00000440223 RSPH6AQ9H0K4 717 aa21.02■□□□□ 0.96
UBE2F-214ENST00000440223 PALLDQ8WX93 1383 aa21.01■□□□□ 0.95
UBE2F-214ENST00000440223 PRKAR2BP31323 418 aa21.01■□□□□ 0.95
UBE2F-214ENST00000440223 STK32BQ9NY57 414 aa21.01■□□□□ 0.95
UBE2F-214ENST00000440223 MTHFSDQ2M296 383 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms