RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 TMEM94Q12767 1356 aa13.05□□□□□ -0.32
NOD1-206ENST00000434755 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
NOD1-206ENST00000434755 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
NOD1-206ENST00000434755 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
NOD1-206ENST00000434755 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
NOD1-206ENST00000434755 BACH2Q9BYV9 841 aa13.05□□□□□ -0.32
NOD1-206ENST00000434755 FBLN1P23142 703 aa13.05□□□□□ -0.32
NOD1-206ENST00000434755 LRRFIP1Q32MZ4 808 aaKnown RBP13.05□□□□□ -0.32
NOD1-206ENST00000434755 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
NOD1-206ENST00000434755 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
NOD1-206ENST00000434755 ROBO2Q9HCK4 1378 aa13.04□□□□□ -0.32
NOD1-206ENST00000434755 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
NOD1-206ENST00000434755 TEX13AQ9BXU3 409 aaPredicted RBP13.04□□□□□ -0.32
NOD1-206ENST00000434755 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
NOD1-206ENST00000434755 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
NOD1-206ENST00000434755 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
NOD1-206ENST00000434755 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
NOD1-206ENST00000434755 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 EXOC5O00471 708 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 REC8O95072 547 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 CDK11BP21127 795 aaKnown RBP13.03□□□□□ -0.32
NOD1-206ENST00000434755 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 BABAM1Q9NWV8 329 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
NOD1-206ENST00000434755 NGLY1Q96IV0 654 aa13.03□□□□□ -0.32
NOD1-206ENST00000434755 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
NOD1-206ENST00000434755 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
NOD1-206ENST00000434755 PTPRMP28827 1452 aa13.02□□□□□ -0.33
NOD1-206ENST00000434755 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
NOD1-206ENST00000434755 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
NOD1-206ENST00000434755 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
NOD1-206ENST00000434755 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
NOD1-206ENST00000434755 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 PIK3C2BO00750 1634 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 BCORL1Q5H9F3 1711 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 ST18O60284 1047 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 STARD3NLO95772 234 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
NOD1-206ENST00000434755 RTL1A6NKG5 1358 aa13□□□□□ -0.33
NOD1-206ENST00000434755 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
NOD1-206ENST00000434755 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
NOD1-206ENST00000434755 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
NOD1-206ENST00000434755 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
NOD1-206ENST00000434755 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
NOD1-206ENST00000434755 SLC4A2P04920 1241 aa13□□□□□ -0.33
NOD1-206ENST00000434755 HOXC9P31274 260 aa13□□□□□ -0.33
NOD1-206ENST00000434755 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
NOD1-206ENST00000434755 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
NOD1-206ENST00000434755 IFIT2P09913 472 aaKnown RBP12.99□□□□□ -0.33
NOD1-206ENST00000434755 DNTTIP2Q5QJE6 756 aaKnown RBP12.99□□□□□ -0.33
NOD1-206ENST00000434755 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
NOD1-206ENST00000434755 USP6P35125 1406 aa12.99□□□□□ -0.33
NOD1-206ENST00000434755 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
NOD1-206ENST00000434755 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
NOD1-206ENST00000434755 CHMP4CQ96CF2 233 aa12.99□□□□□ -0.33
NOD1-206ENST00000434755 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
NOD1-206ENST00000434755 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
NOD1-206ENST00000434755 PTPRCP08575 1304 aa12.99□□□□□ -0.33
NOD1-206ENST00000434755 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
NOD1-206ENST00000434755 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
NOD1-206ENST00000434755 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
NOD1-206ENST00000434755 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
NOD1-206ENST00000434755 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
NOD1-206ENST00000434755 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
NOD1-206ENST00000434755 SF3B2Q13435 895 aaKnown RBP12.97□□□□□ -0.33
NOD1-206ENST00000434755 RUFY2Q8WXA3 655 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 CDC45O75419 566 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 ZCRB1Q8TBF4 217 aaKnown RBP12.97□□□□□ -0.33
NOD1-206ENST00000434755 RIMS1Q86UR5 1692 aaKnown RBP12.97□□□□□ -0.33
NOD1-206ENST00000434755 TECPR2O15040 1411 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 SRCIN1Q9C0H9 1055 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
NOD1-206ENST00000434755 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
NOD1-206ENST00000434755 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
NOD1-206ENST00000434755 GNAI2P04899 355 aa12.96□□□□□ -0.33
NOD1-206ENST00000434755 IL2RBP14784 551 aa12.96□□□□□ -0.33
NOD1-206ENST00000434755 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.34
NOD1-206ENST00000434755 SURF6O75683 361 aaKnown RBP12.96□□□□□ -0.34
NOD1-206ENST00000434755 MCM10Q7L590 875 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 ANO2Q9NQ90 1003 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 APPP05067 770 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 MYL6BP14649 208 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
NOD1-206ENST00000434755 DBF4Q9UBU7 674 aaPredicted RBP12.95□□□□□ -0.34
NOD1-206ENST00000434755 IL13P35225 146 aa12.95□□□□□ -0.34
NOD1-206ENST00000434755 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
NOD1-206ENST00000434755 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
NOD1-206ENST00000434755 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms