RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 DOT1LQ8TEK3 1739 aa28.97■■■□□ 2.23
LMBR1-210ENST00000434503 USP47Q96K76 1375 aa28.97■■■□□ 2.23
LMBR1-210ENST00000434503 SHANK3Q9BYB0 1731 aa28.97■■■□□ 2.23
LMBR1-210ENST00000434503 PNPLA7Q6ZV29 1317 aa28.96■■■□□ 2.23
LMBR1-210ENST00000434503 CHD4Q14839 1912 aa28.96■■■□□ 2.23
LMBR1-210ENST00000434503 KCNQ4P56696 695 aa28.96■■■□□ 2.23
LMBR1-210ENST00000434503 MEGF6O75095 1541 aa28.95■■■□□ 2.23
LMBR1-210ENST00000434503 UTRNP46939 3433 aa28.95■■■□□ 2.23
LMBR1-210ENST00000434503 NSD2O96028 1365 aa28.95■■■□□ 2.22
LMBR1-210ENST00000434503 RTL1A6NKG5 1358 aa28.94■■■□□ 2.22
LMBR1-210ENST00000434503 FYB1O15117 783 aa28.94■■■□□ 2.22
LMBR1-210ENST00000434503 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
LMBR1-210ENST00000434503 LY75O60449 1722 aa28.94■■■□□ 2.22
LMBR1-210ENST00000434503 RRS1Q15050 365 aaKnown RBP28.93■■■□□ 2.22
LMBR1-210ENST00000434503 NBPF6Q5VWK0 638 aa28.93■■■□□ 2.22
LMBR1-210ENST00000434503 NBPF4Q96M43 638 aa28.93■■■□□ 2.22
LMBR1-210ENST00000434503 COL24A1Q17RW2 1714 aa28.92■■■□□ 2.22
LMBR1-210ENST00000434503 POLD1P28340 1107 aa28.92■■■□□ 2.22
LMBR1-210ENST00000434503 TMF1P82094 1093 aa28.92■■■□□ 2.22
LMBR1-210ENST00000434503 GGNBP2Q9H3C7 697 aa28.92■■■□□ 2.22
LMBR1-210ENST00000434503 TUBGCP6Q96RT7 1819 aa28.92■■■□□ 2.22
LMBR1-210ENST00000434503 CGNL1Q0VF96 1302 aa28.89■■■□□ 2.21
LMBR1-210ENST00000434503 GPR162Q16538 588 aa28.88■■■□□ 2.21
LMBR1-210ENST00000434503 USHBP1Q8N6Y0 703 aa28.88■■■□□ 2.21
LMBR1-210ENST00000434503 CCNL1Q9UK58 526 aaPredicted RBP28.88■■■□□ 2.21
LMBR1-210ENST00000434503 TIMELESSQ9UNS1 1208 aa28.88■■■□□ 2.21
LMBR1-210ENST00000434503 KLHL34Q8N239 644 aa28.87■■■□□ 2.21
LMBR1-210ENST00000434503 RAPGEF4Q8WZA2 1011 aa28.86■■■□□ 2.21
LMBR1-210ENST00000434503 CLSPNQ9HAW4 1339 aa28.86■■■□□ 2.21
LMBR1-210ENST00000434503 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
LMBR1-210ENST00000434503 TATP17735 454 aaPredicted RBP28.83■■■□□ 2.21
LMBR1-210ENST00000434503 HSP90AB2PQ58FF8 381 aa28.83■■■□□ 2.21
LMBR1-210ENST00000434503 INSRP06213 1382 aa28.83■■■□□ 2.21
LMBR1-210ENST00000434503 KIF20BQ96Q89 1820 aa28.8■■■□□ 2.2
LMBR1-210ENST00000434503 CDCA8Q53HL2 280 aa28.8■■■□□ 2.2
LMBR1-210ENST00000434503 COL23A1Q86Y22 540 aaPredicted RBP28.8■■■□□ 2.2
LMBR1-210ENST00000434503 FLT4P35916 1363 aa28.79■■■□□ 2.2
LMBR1-210ENST00000434503 KIF24Q5T7B8 1368 aa28.79■■■□□ 2.2
LMBR1-210ENST00000434503 PCDH11XQ9BZA7 1347 aa28.78■■■□□ 2.2
LMBR1-210ENST00000434503 PCDH11YQ9BZA8 1340 aa28.78■■■□□ 2.2
LMBR1-210ENST00000434503 MSH5O43196 834 aa28.78■■■□□ 2.2
LMBR1-210ENST00000434503 PELP1Q8IZL8 1130 aaKnown RBP28.78■■■□□ 2.2
LMBR1-210ENST00000434503 NLGN2Q8NFZ4 835 aa28.78■■■□□ 2.2
LMBR1-210ENST00000434503 C5P01031 1676 aa28.74■■■□□ 2.19
LMBR1-210ENST00000434503 CARD14Q9BXL6 1004 aa28.74■■■□□ 2.19
LMBR1-210ENST00000434503 CYP27B1O15528 508 aa28.73■■■□□ 2.19
LMBR1-210ENST00000434503 MPRIPQ6WCQ1 1025 aa28.73■■■□□ 2.19
LMBR1-210ENST00000434503 HMGB2P26583 209 aaKnown RBP28.72■■■□□ 2.19
LMBR1-210ENST00000434503 C1QTNF8P60827 252 aa28.72■■■□□ 2.19
LMBR1-210ENST00000434503 PALLDQ8WX93 1383 aa28.72■■■□□ 2.19
LMBR1-210ENST00000434503 EMILIN1Q9Y6C2 1016 aa28.71■■■□□ 2.19
LMBR1-210ENST00000434503 MSL1Q68DK7 614 aa28.7■■■□□ 2.18
LMBR1-210ENST00000434503 CCER1Q8TC90 406 aaPredicted RBP28.7■■■□□ 2.18
LMBR1-210ENST00000434503 TAF1LQ8IZX4 1826 aa28.7■■■□□ 2.18
LMBR1-210ENST00000434503 NSD3Q9BZ95 1437 aa28.69■■■□□ 2.18
LMBR1-210ENST00000434503 FLAD1Q8NFF5 587 aa28.68■■■□□ 2.18
LMBR1-210ENST00000434503 ITGB4P16144 1822 aa28.68■■■□□ 2.18
LMBR1-210ENST00000434503 TOGARAM1Q9Y4F4 1720 aa28.68■■■□□ 2.18
LMBR1-210ENST00000434503 PKD1L3Q7Z443 1732 aa28.67■■■□□ 2.18
LMBR1-210ENST00000434503 GRIN3BO60391 1043 aa28.67■■■□□ 2.18
LMBR1-210ENST00000434503 YBX3P16989 372 aaKnown RBP eCLIP28.67■■■□□ 2.189e-8■■■□□ 14.6
LMBR1-210ENST00000434503 SMARCC1Q92922 1105 aaPredicted RBP28.66■■■□□ 2.18
LMBR1-210ENST00000434503 SENP3-EIF4A1A0A087X0R7 540 aa28.65■■■□□ 2.18
LMBR1-210ENST00000434503 NCAPD2Q15021 1401 aa28.65■■■□□ 2.18
LMBR1-210ENST00000434503 GOLGB1Q14789 3259 aaKnown RBP28.64■■■□□ 2.18
LMBR1-210ENST00000434503 PPM1GO15355 546 aaPredicted RBP28.64■■■□□ 2.18
LMBR1-210ENST00000434503 NKX1-1Q15270 411 aaPredicted RBP28.63■■■□□ 2.17
LMBR1-210ENST00000434503 PIGBQ92521 554 aa28.63■■■□□ 2.17
LMBR1-210ENST00000434503 CD2APQ9Y5K6 639 aa28.63■■■□□ 2.17
LMBR1-210ENST00000434503 C4BP0C0L5 1744 aa28.63■■■□□ 2.17
LMBR1-210ENST00000434503 SPG7Q9UQ90 795 aa28.62■■■□□ 2.17
LMBR1-210ENST00000434503 ANKRD26Q9UPS8 1709 aa28.62■■■□□ 2.17
LMBR1-210ENST00000434503 WASHC2AQ641Q2 1341 aa28.62■■■□□ 2.17
LMBR1-210ENST00000434503 POLR3GLQ9BT43 218 aa28.61■■■□□ 2.17
LMBR1-210ENST00000434503 GIGYF1O75420 1035 aaPredicted RBP28.6■■■□□ 2.17
LMBR1-210ENST00000434503 AK7Q96M32 723 aa28.6■■■□□ 2.17
LMBR1-210ENST00000434503 MAP2P11137 1827 aaKnown RBP28.59■■■□□ 2.17
LMBR1-210ENST00000434503 EYA1Q99502 592 aa28.59■■■□□ 2.17
LMBR1-210ENST00000434503 AMIGO3Q86WK7 504 aa28.58■■■□□ 2.17
LMBR1-210ENST00000434503 UBR3Q6ZT12 1888 aa28.57■■■□□ 2.16
LMBR1-210ENST00000434503 EIF4G2P78344 907 aaKnown RBP eCLIP28.57■■■□□ 2.16
LMBR1-210ENST00000434503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.57■■■□□ 2.164e-7■□□□□ 11.1
LMBR1-210ENST00000434503 HSPA5P11021 654 aaKnown RBP28.56■■■□□ 2.16
LMBR1-210ENST00000434503 SMIM5Q71RC9 77 aa28.55■■■□□ 2.16
LMBR1-210ENST00000434503 POLKQ9UBT6 870 aa28.55■■■□□ 2.16
LMBR1-210ENST00000434503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.54■■■□□ 2.16
LMBR1-210ENST00000434503 LOC102724428A0A0B4J2F2 783 aa28.54■■■□□ 2.16
LMBR1-210ENST00000434503 PHF14O94880 888 aa28.54■■■□□ 2.16
LMBR1-210ENST00000434503 SIK1P57059 783 aa28.54■■■□□ 2.16
LMBR1-210ENST00000434503 TMOD3Q9NYL9 352 aa28.53■■■□□ 2.16
LMBR1-210ENST00000434503 SSFA2P28290 1259 aa28.52■■■□□ 2.16
LMBR1-210ENST00000434503 IFNL2Q8IZJ0 200 aa28.52■■■□□ 2.16
LMBR1-210ENST00000434503 LINC00116Q8NCU8 138 aa28.52■■■□□ 2.16
LMBR1-210ENST00000434503 PHKG2P15735 406 aa28.51■■■□□ 2.15
LMBR1-210ENST00000434503 ASAP1Q9ULH1 1129 aa28.51■■■□□ 2.15
LMBR1-210ENST00000434503 ITPK1Q13572 414 aa28.48■■■□□ 2.15
LMBR1-210ENST00000434503 ATP10DQ9P241 1426 aa28.47■■■□□ 2.15
LMBR1-210ENST00000434503 ATP6V1AP38606 617 aa28.47■■■□□ 2.15
LMBR1-210ENST00000434503 EIF4A2Q14240 407 aaKnown RBP28.47■■■□□ 2.15
LMBR1-210ENST00000434503 TNNT2P45379 298 aaPredicted RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms