RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
DDX56-205ENST00000433257 FYB1O15117 783 aa18.32■□□□□ 0.52
DDX56-205ENST00000433257 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
DDX56-205ENST00000433257 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
DDX56-205ENST00000433257 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
DDX56-205ENST00000433257 BRINP3Q76B58 766 aa18.31■□□□□ 0.52
DDX56-205ENST00000433257 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
DDX56-205ENST00000433257 TNPO1Q92973 898 aaKnown RBP18.31■□□□□ 0.52
DDX56-205ENST00000433257 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
DDX56-205ENST00000433257 CDC45O75419 566 aa18.31■□□□□ 0.52
DDX56-205ENST00000433257 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
DDX56-205ENST00000433257 ESPNB1AK53 854 aa18.29■□□□□ 0.52
DDX56-205ENST00000433257 ZBTB7BO15156 539 aaPredicted RBP18.29■□□□□ 0.52
DDX56-205ENST00000433257 CCDC173Q0VFZ6 552 aa18.29■□□□□ 0.52
DDX56-205ENST00000433257 NFE2L2Q16236 605 aa18.29■□□□□ 0.52
DDX56-205ENST00000433257 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
DDX56-205ENST00000433257 GZF1Q9H116 711 aaPredicted RBP18.29■□□□□ 0.52
DDX56-205ENST00000433257 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
DDX56-205ENST00000433257 RABEP1Q15276 862 aa18.28■□□□□ 0.52
DDX56-205ENST00000433257 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
DDX56-205ENST00000433257 ABCC4O15439 1325 aa18.28■□□□□ 0.52
DDX56-205ENST00000433257 NUCB2P80303 420 aa18.28■□□□□ 0.52
DDX56-205ENST00000433257 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.52
DDX56-205ENST00000433257 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.52
DDX56-205ENST00000433257 RRP9O43818 475 aaKnown RBP18.27■□□□□ 0.52
DDX56-205ENST00000433257 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
DDX56-205ENST00000433257 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
DDX56-205ENST00000433257 NAP1L5Q96NT1 182 aaPredicted RBP18.27■□□□□ 0.52
DDX56-205ENST00000433257 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
DDX56-205ENST00000433257 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
DDX56-205ENST00000433257 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
DDX56-205ENST00000433257 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.51
DDX56-205ENST00000433257 TPM2P07951 284 aa18.25■□□□□ 0.51
DDX56-205ENST00000433257 HSPA1LP34931 641 aa18.25■□□□□ 0.51
DDX56-205ENST00000433257 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
DDX56-205ENST00000433257 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
DDX56-205ENST00000433257 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
DDX56-205ENST00000433257 FOXO3O43524 673 aa18.25■□□□□ 0.51
DDX56-205ENST00000433257 VAMP4O75379 141 aa18.25■□□□□ 0.51
DDX56-205ENST00000433257 AATKQ6ZMQ8 1374 aa18.24■□□□□ 0.51
DDX56-205ENST00000433257 PRR36Q9H6K5 1346 aa18.24■□□□□ 0.51
DDX56-205ENST00000433257 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
DDX56-205ENST00000433257 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
DDX56-205ENST00000433257 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
DDX56-205ENST00000433257 PSME1Q06323 249 aa18.23■□□□□ 0.51
DDX56-205ENST00000433257 HS1BP3Q53T59 392 aa18.23■□□□□ 0.51
DDX56-205ENST00000433257 TBC1D9Q6ZT07 1266 aa18.23■□□□□ 0.51
DDX56-205ENST00000433257 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
DDX56-205ENST00000433257 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
DDX56-205ENST00000433257 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
DDX56-205ENST00000433257 DDX17Q92841 729 aaKnown RBP18.22■□□□□ 0.51
DDX56-205ENST00000433257 PPP1R9BQ96SB3 815 aa18.22■□□□□ 0.51
DDX56-205ENST00000433257 KIF2CQ99661 725 aa18.22■□□□□ 0.51
DDX56-205ENST00000433257 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
DDX56-205ENST00000433257 TERF1P54274 439 aa18.21■□□□□ 0.51
DDX56-205ENST00000433257 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
DDX56-205ENST00000433257 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
DDX56-205ENST00000433257 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
DDX56-205ENST00000433257 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
DDX56-205ENST00000433257 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
DDX56-205ENST00000433257 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
DDX56-205ENST00000433257 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
DDX56-205ENST00000433257 ZNF445P59923 1031 aa18.18■□□□□ 0.5
DDX56-205ENST00000433257 KRT28Q7Z3Y7 464 aa18.18■□□□□ 0.5
DDX56-205ENST00000433257 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
DDX56-205ENST00000433257 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
DDX56-205ENST00000433257 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
DDX56-205ENST00000433257 ST18O60284 1047 aa18.17■□□□□ 0.5
DDX56-205ENST00000433257 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
DDX56-205ENST00000433257 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
DDX56-205ENST00000433257 ACEP12821 1306 aa18.17■□□□□ 0.5
DDX56-205ENST00000433257 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
DDX56-205ENST00000433257 ARXQ96QS3 562 aa18.16■□□□□ 0.5
DDX56-205ENST00000433257 PHLPP1O60346 1717 aa18.16■□□□□ 0.5
DDX56-205ENST00000433257 KIF1AQ12756 1690 aa18.16■□□□□ 0.5
DDX56-205ENST00000433257 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
DDX56-205ENST00000433257 REC8O95072 547 aa18.15■□□□□ 0.5
DDX56-205ENST00000433257 BAG4O95429 457 aaKnown RBP18.15■□□□□ 0.5
DDX56-205ENST00000433257 HSP90AA2PQ14568 343 aaPredicted RBP18.15■□□□□ 0.5
DDX56-205ENST00000433257 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
DDX56-205ENST00000433257 ZSCAN30Q86W11 494 aa18.15■□□□□ 0.5
DDX56-205ENST00000433257 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
DDX56-205ENST00000433257 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
DDX56-205ENST00000433257 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.14■□□□□ 0.49
DDX56-205ENST00000433257 PTPRCP08575 1304 aa18.14■□□□□ 0.49
DDX56-205ENST00000433257 KIAA0232Q92628 1395 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 MSNP26038 577 aaKnown RBP18.13■□□□□ 0.49
DDX56-205ENST00000433257 IL13P35225 146 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 MCM2P49736 904 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 ANKRD44Q8N8A2 993 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 MBIPQ9NS73 344 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 DLG5Q8TDM6 1919 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 NHSL1Q5SYE7 1610 aa18.13■□□□□ 0.49
DDX56-205ENST00000433257 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
DDX56-205ENST00000433257 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
DDX56-205ENST00000433257 HMMRO75330 724 aa18.12■□□□□ 0.49
DDX56-205ENST00000433257 MCM5P33992 734 aa18.12■□□□□ 0.49
DDX56-205ENST00000433257 GAS2L2Q8NHY3 880 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms