RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 TRIM35Q9UPQ4 493 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 CCDC141Q6ZP82 1450 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 BRINP3Q76B58 766 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 PIK3R4Q99570 1358 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 NEFLP07196 543 aa8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 C1QTNF8P60827 252 aa8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 FOXK1P85037 733 aa8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 VRTNQ9H8Y1 702 aa8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 PRDM10Q9NQV6 1147 aa8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 BCCIPQ9P287 314 aaKnown RBP eCLIP8.41□□□□□ -1.06
NIPAL3-205ENST00000432012 MAST1Q9Y2H9 1570 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 GPR37L1O60883 481 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 PPP1R12CQ9BZL4 782 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 RPRD2Q5VT52 1461 aaKnown RBP8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 RALGAPBQ86X10 1494 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 NINLQ9Y2I6 1382 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 LMOD1P29536 600 aaPredicted RBP8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 SLC26A8Q96RN1 970 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 UCN2Q96RP3 112 aa8.4□□□□□ -1.06
NIPAL3-205ENST00000432012 PALM3A6NDB9 673 aaPredicted RBP8.39□□□□□ -1.07
NIPAL3-205ENST00000432012 PLEKHG1Q9ULL1 1385 aa8.39□□□□□ -1.07
NIPAL3-205ENST00000432012 SCNN1AP37088 669 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 LAMC1P11047 1609 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 TBX22Q9Y458 520 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 CEP152O94986 1710 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 FOSBP53539 338 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 DEFB132Q7Z7B7 95 aa8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
NIPAL3-205ENST00000432012 ADGRB3O60242 1522 aa8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 PSDA5PKW4 1024 aaPredicted RBP8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 DNAJC14Q6Y2X3 702 aaPredicted RBP8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 ANP32EQ9BTT0 268 aa8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 COL22A1Q8NFW1 1626 aaPredicted RBP8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
NIPAL3-205ENST00000432012 ARHGEF5Q12774 1597 aa8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 TAGLNQ01995 201 aaKnown RBP8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 SPATA32Q96LK8 384 aa8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 HAX1O00165 279 aa8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 TSR1Q2NL82 804 aaKnown RBP8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 ZNF784Q8NCA9 323 aaPredicted RBP8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 HMX1Q9NP08 348 aaPredicted RBP8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 TFIP11Q9UBB9 837 aaKnown RBP8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 MTUS2Q5JR59 1369 aa8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 RGPD1P0DJD0 1748 aa8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 MARF1Q9Y4F3 1742 aaKnown RBP8.36□□□□□ -1.07
NIPAL3-205ENST00000432012 AP1G2O75843 785 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 TIE1P35590 1138 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 GIMAP6Q6P9H5 292 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 METTL3Q86U44 580 aaKnown RBP8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 EHBP1L1Q8N3D4 1523 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 RAB3GAP2Q9H2M9 1393 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 TSPY4P0CV99 314 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 TSPY10P0CW01 314 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 PHLDB3Q6NSJ2 640 aa8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 NOL8Q76FK4 1167 aaKnown RBP8.35□□□□□ -1.07
NIPAL3-205ENST00000432012 MST1RQ04912 1400 aa8.34□□□□□ -1.07
NIPAL3-205ENST00000432012 DISP2A7MBM2 1401 aa8.34□□□□□ -1.07
NIPAL3-205ENST00000432012 ATN1P54259 1190 aaPredicted RBP8.34□□□□□ -1.07
NIPAL3-205ENST00000432012 CFAP65Q6ZU64 1925 aaKnown RBP8.34□□□□□ -1.07
NIPAL3-205ENST00000432012 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 PARD3Q8TEW0 1356 aa8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 MARCH6O60337 910 aa8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 TMC2Q8TDI7 906 aa8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 PCDHB15Q9Y5E8 787 aa8.33□□□□□ -1.08
NIPAL3-205ENST00000432012 TRPM2O94759 1503 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 ITGAEP38570 1179 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 STK32AQ8WU08 396 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 SLC52A1Q9NWF4 448 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 BRWD3Q6RI45 1802 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 TCF3P15923 654 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 FGD1P98174 961 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 MICALL2Q8IY33 904 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 GIPC2Q8TF65 315 aa8.32□□□□□ -1.08
NIPAL3-205ENST00000432012 SLC34A2O95436 690 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 R3HDM1Q15032 1099 aaKnown RBP8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 SRCAPQ6ZRS2 3230 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 ADGRB2O60241 1585 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 CC2D2BQ6DHV5 1058 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 KANK1Q14678 1352 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 ANKRD62A6NC57 917 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 USP17L8P0C7I0 530 aa8.31□□□□□ -1.08
NIPAL3-205ENST00000432012 GLI3P10071 1580 aa8.3□□□□□ -1.08
NIPAL3-205ENST00000432012 SOS2Q07890 1332 aaPredicted RBP8.3□□□□□ -1.08
NIPAL3-205ENST00000432012 ZFYVE9O95405 1425 aa8.3□□□□□ -1.08
NIPAL3-205ENST00000432012 DUOX2Q9NRD8 1548 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms