RNA–Protein interactions for RNA: ENST00000431037.2

PMS2P1-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 1, humanhuman

BASIC

Gene PMS2P1, Length 1,228 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P1-201ENST00000431037 SHANK3Q9BYB0 1731 aa24.26■■□□□ 1.47
PMS2P1-201ENST00000431037 SLC24A1O60721 1099 aa24.25■■□□□ 1.47
PMS2P1-201ENST00000431037 GPR162Q16538 588 aa24.25■■□□□ 1.47
PMS2P1-201ENST00000431037 TFCP2L1Q9NZI6 479 aa24.25■■□□□ 1.47
PMS2P1-201ENST00000431037 RTL1A6NKG5 1358 aa24.25■■□□□ 1.47
PMS2P1-201ENST00000431037 SYTL4Q96C24 671 aaPredicted RBP24.24■■□□□ 1.47
PMS2P1-201ENST00000431037 LTV1Q96GA3 475 aaPredicted RBP24.24■■□□□ 1.47
PMS2P1-201ENST00000431037 MAP3K19Q56UN5 1328 aa24.24■■□□□ 1.47
PMS2P1-201ENST00000431037 GOLGB1Q14789 3259 aaKnown RBP24.23■■□□□ 1.47
PMS2P1-201ENST00000431037 HOXC9P31274 260 aa24.23■■□□□ 1.47
PMS2P1-201ENST00000431037 NSD2O96028 1365 aa24.22■■□□□ 1.47
PMS2P1-201ENST00000431037 PRIM1P49642 420 aaKnown RBP24.22■■□□□ 1.47
PMS2P1-201ENST00000431037 MEGF6O75095 1541 aa24.21■■□□□ 1.47
PMS2P1-201ENST00000431037 AMPHP49418 695 aa24.21■■□□□ 1.47
PMS2P1-201ENST00000431037 CGNL1Q0VF96 1302 aa24.2■■□□□ 1.46
PMS2P1-201ENST00000431037 C1QTNF8P60827 252 aa24.2■■□□□ 1.46
PMS2P1-201ENST00000431037 KLHL34Q8N239 644 aa24.2■■□□□ 1.46
PMS2P1-201ENST00000431037 ZCRB1Q8TBF4 217 aaKnown RBP24.2■■□□□ 1.46
PMS2P1-201ENST00000431037 RGPD2P0DJD1 1756 aa24.2■■□□□ 1.46
PMS2P1-201ENST00000431037 TESK2Q96S53 571 aa24.19■■□□□ 1.46
PMS2P1-201ENST00000431037 SMG6Q86US8 1419 aaKnown RBP24.18■■□□□ 1.46
PMS2P1-201ENST00000431037 USP47Q96K76 1375 aa24.17■■□□□ 1.46
PMS2P1-201ENST00000431037 SENP3-EIF4A1A0A087X0R7 540 aa24.17■■□□□ 1.46
PMS2P1-201ENST00000431037 CCNL1Q9UK58 526 aaPredicted RBP24.17■■□□□ 1.46
PMS2P1-201ENST00000431037 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
PMS2P1-201ENST00000431037 KCNQ4P56696 695 aa24.15■■□□□ 1.46
PMS2P1-201ENST00000431037 ST20-MTHFSA0A0A6YYL1 179 aa24.14■■□□□ 1.45
PMS2P1-201ENST00000431037 C5P01031 1676 aa24.14■■□□□ 1.45
PMS2P1-201ENST00000431037 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
PMS2P1-201ENST00000431037 GIGYF1O75420 1035 aaPredicted RBP24.12■■□□□ 1.45
PMS2P1-201ENST00000431037 RAPGEF4Q8WZA2 1011 aa24.12■■□□□ 1.45
PMS2P1-201ENST00000431037 NLGN2Q8NFZ4 835 aa24.11■■□□□ 1.45
PMS2P1-201ENST00000431037 GRIN3BO60391 1043 aa24.1■■□□□ 1.45
PMS2P1-201ENST00000431037 NBPF6Q5VWK0 638 aa24.1■■□□□ 1.45
PMS2P1-201ENST00000431037 NBPF4Q96M43 638 aa24.1■■□□□ 1.45
PMS2P1-201ENST00000431037 KIF24Q5T7B8 1368 aa24.1■■□□□ 1.45
PMS2P1-201ENST00000431037 PCDH11XQ9BZA7 1347 aa24.1■■□□□ 1.45
PMS2P1-201ENST00000431037 PCDH11YQ9BZA8 1340 aa24.1■■□□□ 1.45
PMS2P1-201ENST00000431037 MSH5O43196 834 aa24.09■■□□□ 1.45
PMS2P1-201ENST00000431037 FBLN1P23142 703 aa24.09■■□□□ 1.45
PMS2P1-201ENST00000431037 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
PMS2P1-201ENST00000431037 INSRP06213 1382 aa24.08■■□□□ 1.45
PMS2P1-201ENST00000431037 RRS1Q15050 365 aaKnown RBP24.08■■□□□ 1.45
PMS2P1-201ENST00000431037 FYB1O15117 783 aa24.07■■□□□ 1.44
PMS2P1-201ENST00000431037 TATP17735 454 aaPredicted RBP24.07■■□□□ 1.44
PMS2P1-201ENST00000431037 COL23A1Q86Y22 540 aaPredicted RBP24.07■■□□□ 1.44
PMS2P1-201ENST00000431037 FLT4P35916 1363 aa24.06■■□□□ 1.44
PMS2P1-201ENST00000431037 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
PMS2P1-201ENST00000431037 FLAD1Q8NFF5 587 aa24.06■■□□□ 1.44
PMS2P1-201ENST00000431037 TMF1P82094 1093 aa24.05■■□□□ 1.44
PMS2P1-201ENST00000431037 USHBP1Q8N6Y0 703 aa24.05■■□□□ 1.44
PMS2P1-201ENST00000431037 PALLDQ8WX93 1383 aa24.04■■□□□ 1.44
PMS2P1-201ENST00000431037 GGNBP2Q9H3C7 697 aa24.04■■□□□ 1.44
PMS2P1-201ENST00000431037 YBX3P16989 372 aaKnown RBP eCLIP24.03■■□□□ 1.44
PMS2P1-201ENST00000431037 PKD1L3Q7Z443 1732 aa24.02■■□□□ 1.44
PMS2P1-201ENST00000431037 CD2APQ9Y5K6 639 aa24.02■■□□□ 1.44
PMS2P1-201ENST00000431037 NSD3Q9BZ95 1437 aa24.01■■□□□ 1.43
PMS2P1-201ENST00000431037 C4BP0C0L5 1744 aa24.01■■□□□ 1.43
PMS2P1-201ENST00000431037 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
PMS2P1-201ENST00000431037 CDCA8Q53HL2 280 aa24■■□□□ 1.43
PMS2P1-201ENST00000431037 MSL1Q68DK7 614 aa24■■□□□ 1.43
PMS2P1-201ENST00000431037 CEP350Q5VT06 3117 aa23.99■■□□□ 1.43
PMS2P1-201ENST00000431037 ITGB4P16144 1822 aa23.99■■□□□ 1.43
PMS2P1-201ENST00000431037 HSP90AB2PQ58FF8 381 aa23.99■■□□□ 1.43
PMS2P1-201ENST00000431037 SMARCC1Q92922 1105 aaPredicted RBP23.99■■□□□ 1.43
PMS2P1-201ENST00000431037 MPRIPQ6WCQ1 1025 aa23.98■■□□□ 1.43
PMS2P1-201ENST00000431037 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
PMS2P1-201ENST00000431037 NCAPD2Q15021 1401 aa23.97■■□□□ 1.43
PMS2P1-201ENST00000431037 CYP27B1O15528 508 aa23.96■■□□□ 1.43
PMS2P1-201ENST00000431037 AK7Q96M32 723 aa23.96■■□□□ 1.43
PMS2P1-201ENST00000431037 UBR3Q6ZT12 1888 aa23.96■■□□□ 1.43
PMS2P1-201ENST00000431037 ATP10DQ9P241 1426 aa23.95■■□□□ 1.42
PMS2P1-201ENST00000431037 ADCY9O60503 1353 aa23.91■■□□□ 1.42
PMS2P1-201ENST00000431037 SPG7Q9UQ90 795 aa23.91■■□□□ 1.42
PMS2P1-201ENST00000431037 MAP2P11137 1827 aaKnown RBP23.91■■□□□ 1.42
PMS2P1-201ENST00000431037 SSFA2P28290 1259 aa23.9■■□□□ 1.42
PMS2P1-201ENST00000431037 NKX1-1Q15270 411 aaPredicted RBP23.9■■□□□ 1.42
PMS2P1-201ENST00000431037 PIGBQ92521 554 aa23.89■■□□□ 1.41
PMS2P1-201ENST00000431037 GPBP1L1Q9HC44 474 aaPredicted RBP23.89■■□□□ 1.41
PMS2P1-201ENST00000431037 EMILIN1Q9Y6C2 1016 aa23.89■■□□□ 1.41
PMS2P1-201ENST00000431037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
PMS2P1-201ENST00000431037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.88■■□□□ 1.41
PMS2P1-201ENST00000431037 PLEKHG2Q9H7P9 1386 aa23.87■■□□□ 1.41
PMS2P1-201ENST00000431037 LOC102724428A0A0B4J2F2 783 aa23.86■■□□□ 1.41
PMS2P1-201ENST00000431037 PHF14O94880 888 aa23.86■■□□□ 1.41
PMS2P1-201ENST00000431037 SIK1P57059 783 aa23.86■■□□□ 1.41
PMS2P1-201ENST00000431037 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
PMS2P1-201ENST00000431037 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
PMS2P1-201ENST00000431037 IGSF1Q8N6C5 1336 aa23.85■■□□□ 1.41
PMS2P1-201ENST00000431037 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
PMS2P1-201ENST00000431037 AMIGO3Q86WK7 504 aa23.85■■□□□ 1.41
PMS2P1-201ENST00000431037 TMOD3Q9NYL9 352 aa23.85■■□□□ 1.41
PMS2P1-201ENST00000431037 PPM1GO15355 546 aaPredicted RBP23.83■■□□□ 1.41
PMS2P1-201ENST00000431037 CICQ96RK0 1608 aaPredicted RBP23.83■■□□□ 1.41
PMS2P1-201ENST00000431037 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
PMS2P1-201ENST00000431037 LINC00116Q8NCU8 138 aa23.82■■□□□ 1.4
PMS2P1-201ENST00000431037 ZNF831Q5JPB2 1677 aa23.8■■□□□ 1.4
PMS2P1-201ENST00000431037 GNPATO15228 680 aa23.8■■□□□ 1.4
PMS2P1-201ENST00000431037 IFNL2Q8IZJ0 200 aa23.8■■□□□ 1.4
PMS2P1-201ENST00000431037 IFFO2Q5TF58 517 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms