RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
NUP50-208ENST00000430547 KCNQ2O43526 872 aa24.14■■□□□ 1.45
NUP50-208ENST00000430547 ZCRB1Q8TBF4 217 aaKnown RBP24.14■■□□□ 1.45
NUP50-208ENST00000430547 DOT1LQ8TEK3 1739 aa24.14■■□□□ 1.45
NUP50-208ENST00000430547 NSD2O96028 1365 aa24.14■■□□□ 1.45
NUP50-208ENST00000430547 TNNT2P45379 298 aaPredicted RBP24.13■■□□□ 1.45
NUP50-208ENST00000430547 TATP17735 454 aaPredicted RBP24.12■■□□□ 1.45
NUP50-208ENST00000430547 KNSTRNQ9Y448 316 aa24.11■■□□□ 1.45
NUP50-208ENST00000430547 WASHC2AQ641Q2 1341 aa24.1■■□□□ 1.45
NUP50-208ENST00000430547 KIF7Q2M1P5 1343 aa24.1■■□□□ 1.45
NUP50-208ENST00000430547 TXNRD1Q16881 649 aa24.09■■□□□ 1.45
NUP50-208ENST00000430547 POLKQ9UBT6 870 aa24.09■■□□□ 1.45
NUP50-208ENST00000430547 SYTL4Q96C24 671 aaPredicted RBP24.07■■□□□ 1.44
NUP50-208ENST00000430547 MORC1Q86VD1 984 aa24.06■■□□□ 1.44
NUP50-208ENST00000430547 PROM2Q8N271 834 aa24.06■■□□□ 1.44
NUP50-208ENST00000430547 PKD1L3Q7Z443 1732 aa24.06■■□□□ 1.44
NUP50-208ENST00000430547 PCDH11XQ9BZA7 1347 aa24.06■■□□□ 1.44
NUP50-208ENST00000430547 PCDH11YQ9BZA8 1340 aa24.06■■□□□ 1.44
NUP50-208ENST00000430547 STK32BQ9NY57 414 aa24.04■■□□□ 1.44
NUP50-208ENST00000430547 ANO8Q9HCE9 1232 aaPredicted RBP24.03■■□□□ 1.44
NUP50-208ENST00000430547 NCAPD2Q15021 1401 aa24.02■■□□□ 1.44
NUP50-208ENST00000430547 PRIM1P49642 420 aaKnown RBP24.01■■□□□ 1.43
NUP50-208ENST00000430547 EYA1Q99502 592 aa24.01■■□□□ 1.43
NUP50-208ENST00000430547 CASZ1Q86V15 1759 aa24■■□□□ 1.43
NUP50-208ENST00000430547 EIF4A2Q14240 407 aaKnown RBP23.99■■□□□ 1.43
NUP50-208ENST00000430547 LY75O60449 1722 aa23.98■■□□□ 1.43
NUP50-208ENST00000430547 SPG7Q9UQ90 795 aa23.98■■□□□ 1.43
NUP50-208ENST00000430547 PAPPAQ13219 1627 aa23.98■■□□□ 1.43
NUP50-208ENST00000430547 ITGB4P16144 1822 aa23.97■■□□□ 1.43
NUP50-208ENST00000430547 SLC15A2Q16348 729 aa23.97■■□□□ 1.43
NUP50-208ENST00000430547 SPON1Q9HCB6 807 aa23.97■■□□□ 1.43
NUP50-208ENST00000430547 AMER1Q5JTC6 1135 aaPredicted RBP23.95■■□□□ 1.42
NUP50-208ENST00000430547 SLC27A3Q5K4L6 730 aa23.95■■□□□ 1.42
NUP50-208ENST00000430547 TOGARAM1Q9Y4F4 1720 aa23.95■■□□□ 1.42
NUP50-208ENST00000430547 CYP27B1O15528 508 aa23.94■■□□□ 1.42
NUP50-208ENST00000430547 PPP1R1BQ9UD71 204 aaPredicted RBP23.93■■□□□ 1.42
NUP50-208ENST00000430547 IGSF1Q8N6C5 1336 aa23.92■■□□□ 1.42
NUP50-208ENST00000430547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.92■■□□□ 1.425e-6■□□□□ 10.1
NUP50-208ENST00000430547 LRRC4BQ9NT99 713 aa23.91■■□□□ 1.42
NUP50-208ENST00000430547 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
NUP50-208ENST00000430547 QSER1Q2KHR3 1735 aa23.9■■□□□ 1.42
NUP50-208ENST00000430547 CC2D1BQ5T0F9 858 aaKnown RBP23.9■■□□□ 1.42
NUP50-208ENST00000430547 MPRIPQ6WCQ1 1025 aa23.89■■□□□ 1.41
NUP50-208ENST00000430547 PER1O15534 1290 aaPredicted RBP23.88■■□□□ 1.41
NUP50-208ENST00000430547 ZBTB7AO95365 584 aa23.88■■□□□ 1.41
NUP50-208ENST00000430547 IFNL2Q8IZJ0 200 aa23.88■■□□□ 1.41
NUP50-208ENST00000430547 PDGFDQ9GZP0 370 aaPredicted RBP23.88■■□□□ 1.41
NUP50-208ENST00000430547 CCNL1Q9UK58 526 aaPredicted RBP23.88■■□□□ 1.41
NUP50-208ENST00000430547 TUBGCP6Q96RT7 1819 aa23.87■■□□□ 1.41
NUP50-208ENST00000430547 C5P01031 1676 aa23.86■■□□□ 1.41
NUP50-208ENST00000430547 NKX1-1Q15270 411 aaPredicted RBP23.86■■□□□ 1.41
NUP50-208ENST00000430547 ZNF827Q17R98 1081 aa23.86■■□□□ 1.41
NUP50-208ENST00000430547 PHKG2P15735 406 aa23.85■■□□□ 1.41
NUP50-208ENST00000430547 KCNQ4P56696 695 aa23.85■■□□□ 1.41
NUP50-208ENST00000430547 CNGB1Q14028 1251 aaPredicted RBP23.85■■□□□ 1.41
NUP50-208ENST00000430547 TAF1LQ8IZX4 1826 aa23.84■■□□□ 1.41
NUP50-208ENST00000430547 PALLDQ8WX93 1383 aa23.84■■□□□ 1.41
NUP50-208ENST00000430547 PLEKHO1Q53GL0 409 aaPredicted RBP23.84■■□□□ 1.41
NUP50-208ENST00000430547 NPC1L1Q9UHC9 1359 aa23.83■■□□□ 1.41
NUP50-208ENST00000430547 HMGB2P26583 209 aaKnown RBP23.83■■□□□ 1.41
NUP50-208ENST00000430547 MTHFSP49914 203 aa23.83■■□□□ 1.41
NUP50-208ENST00000430547 SMARCC1Q92922 1105 aaPredicted RBP23.83■■□□□ 1.41
NUP50-208ENST00000430547 AKT1S1Q96B36 256 aa23.83■■□□□ 1.41
NUP50-208ENST00000430547 MTFR1LQ9H019 292 aa23.83■■□□□ 1.41
NUP50-208ENST00000430547 TFCP2L1Q9NZI6 479 aa23.83■■□□□ 1.41
NUP50-208ENST00000430547 ATF5Q9Y2D1 282 aaPredicted RBP23.83■■□□□ 1.41
NUP50-208ENST00000430547 AMOTQ4VCS5 1084 aa23.82■■□□□ 1.4
NUP50-208ENST00000430547 TMOD3Q9NYL9 352 aa23.82■■□□□ 1.4
NUP50-208ENST00000430547 SULT6B1Q6IMI4 303 aa23.81■■□□□ 1.4
NUP50-208ENST00000430547 HSP90AB1P08238 724 aaKnown RBP23.8■■□□□ 1.4
NUP50-208ENST00000430547 IL13P35225 146 aa23.8■■□□□ 1.4
NUP50-208ENST00000430547 AEBP1Q8IUX7 1158 aa23.8■■□□□ 1.4
NUP50-208ENST00000430547 PIGBQ92521 554 aa23.8■■□□□ 1.4
NUP50-208ENST00000430547 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
NUP50-208ENST00000430547 C1orf141Q5JVX7 400 aa23.78■■□□□ 1.4
NUP50-208ENST00000430547 KDRP35968 1356 aa23.78■■□□□ 1.4
NUP50-208ENST00000430547 PNPLA7Q6ZV29 1317 aa23.77■■□□□ 1.4
NUP50-208ENST00000430547 DIAPH1O60610 1272 aaKnown RBP23.76■■□□□ 1.39
NUP50-208ENST00000430547 PTGER2P43116 358 aa23.76■■□□□ 1.39
NUP50-208ENST00000430547 DCAF5Q96JK2 942 aa23.76■■□□□ 1.39
NUP50-208ENST00000430547 SLC16A10Q8TF71 515 aa23.75■■□□□ 1.39
NUP50-208ENST00000430547 C4BP0C0L5 1744 aa23.75■■□□□ 1.39
NUP50-208ENST00000430547 VIRMAQ69YN4 1812 aaKnown RBP23.73■■□□□ 1.39
NUP50-208ENST00000430547 ERVV-2B6SEH9 535 aa23.73■■□□□ 1.39
NUP50-208ENST00000430547 MSH5O43196 834 aa23.73■■□□□ 1.39
NUP50-208ENST00000430547 SCN11AQ9UI33 1791 aa23.73■■□□□ 1.39
NUP50-208ENST00000430547 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
NUP50-208ENST00000430547 HMOX1P09601 288 aa23.71■■□□□ 1.39
NUP50-208ENST00000430547 AK7Q96M32 723 aa23.71■■□□□ 1.39
NUP50-208ENST00000430547 ASAP1Q9ULH1 1129 aa23.71■■□□□ 1.39
NUP50-208ENST00000430547 COL24A1Q17RW2 1714 aa23.7■■□□□ 1.39
NUP50-208ENST00000430547 KDM6AO15550 1401 aaPredicted RBP23.7■■□□□ 1.38
NUP50-208ENST00000430547 LOC102724428A0A0B4J2F2 783 aa23.7■■□□□ 1.38
NUP50-208ENST00000430547 POLD1P28340 1107 aa23.7■■□□□ 1.38
NUP50-208ENST00000430547 SIK1P57059 783 aa23.7■■□□□ 1.38
NUP50-208ENST00000430547 CABP4P57796 275 aa23.7■■□□□ 1.38
NUP50-208ENST00000430547 UBR3Q6ZT12 1888 aa23.69■■□□□ 1.38
NUP50-208ENST00000430547 ARXQ96QS3 562 aa23.69■■□□□ 1.38
NUP50-208ENST00000430547 SGIP1Q9BQI5 828 aa23.69■■□□□ 1.38
NUP50-208ENST00000430547 COL3A1P02461 1466 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms