RNA–Protein interactions for RNA: ENST00000430297.6

RETREG2-203, Transcript of reticulophagy regulator family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG2, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-203ENST00000430297 BRPF3Q9ULD4 1205 aa23.28■■□□□ 1.32
RETREG2-203ENST00000430297 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
RETREG2-203ENST00000430297 FIBPO43427 364 aa23.28■■□□□ 1.32
RETREG2-203ENST00000430297 ARHGAP45Q92619 1136 aa23.28■■□□□ 1.32
RETREG2-203ENST00000430297 CNNM1Q9NRU3 951 aa23.27■■□□□ 1.32
RETREG2-203ENST00000430297 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
RETREG2-203ENST00000430297 SAFBQ15424 915 aaKnown RBP eCLIP23.27■■□□□ 1.32
RETREG2-203ENST00000430297 TPD52L1Q16890 204 aaPredicted RBP23.27■■□□□ 1.32
RETREG2-203ENST00000430297 CEP170Q5SW79 1584 aa23.27■■□□□ 1.31
RETREG2-203ENST00000430297 CLSTN1O94985 981 aa23.26■■□□□ 1.31
RETREG2-203ENST00000430297 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
RETREG2-203ENST00000430297 RAB11FIP3O75154 756 aa23.25■■□□□ 1.31
RETREG2-203ENST00000430297 CCDC57Q2TAC2 916 aa23.25■■□□□ 1.31
RETREG2-203ENST00000430297 DNAAF4Q8WXU2 420 aa23.25■■□□□ 1.31
RETREG2-203ENST00000430297 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
RETREG2-203ENST00000430297 HDAC1Q13547 482 aaPredicted RBP23.25■■□□□ 1.31
RETREG2-203ENST00000430297 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
RETREG2-203ENST00000430297 WDR33Q9C0J8 1336 aaKnown RBP23.25■■□□□ 1.31
RETREG2-203ENST00000430297 BMP2KLQ5H9B9 411 aa23.25■■□□□ 1.31
RETREG2-203ENST00000430297 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
RETREG2-203ENST00000430297 PES1O00541 588 aaKnown RBP23.24■■□□□ 1.31
RETREG2-203ENST00000430297 GLRX3O76003 335 aaKnown RBP23.24■■□□□ 1.31
RETREG2-203ENST00000430297 FAM43AQ8N2R8 423 aa23.24■■□□□ 1.31
RETREG2-203ENST00000430297 DBF4Q9UBU7 674 aaPredicted RBP23.24■■□□□ 1.31
RETREG2-203ENST00000430297 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
RETREG2-203ENST00000430297 TTC39AQ5SRH9 613 aa23.23■■□□□ 1.31
RETREG2-203ENST00000430297 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
RETREG2-203ENST00000430297 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
RETREG2-203ENST00000430297 SDF4Q9BRK5 362 aa23.23■■□□□ 1.31
RETREG2-203ENST00000430297 PTCD1O75127 700 aaKnown RBP23.23■■□□□ 1.31
RETREG2-203ENST00000430297 ANKRD1Q15327 319 aa23.23■■□□□ 1.31
RETREG2-203ENST00000430297 BLOC1S2Q6QNY1 142 aa23.23■■□□□ 1.31
RETREG2-203ENST00000430297 A0A1W2PP64 1363 aa23.22■■□□□ 1.31
RETREG2-203ENST00000430297 NPC1L1Q9UHC9 1359 aa23.22■■□□□ 1.31
RETREG2-203ENST00000430297 JAKMIP1Q96N16 626 aaKnown RBP23.22■■□□□ 1.31
RETREG2-203ENST00000430297 UPF3BQ9BZI7 483 aaKnown RBP23.22■■□□□ 1.31
RETREG2-203ENST00000430297 TNNQ9UQP3 1299 aa23.21■■□□□ 1.31
RETREG2-203ENST00000430297 TTC21AQ8NDW8 1320 aa23.21■■□□□ 1.31
RETREG2-203ENST00000430297 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
RETREG2-203ENST00000430297 FBXW7Q969H0 707 aa23.21■■□□□ 1.31
RETREG2-203ENST00000430297 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
RETREG2-203ENST00000430297 RLBP1P12271 317 aa23.21■■□□□ 1.31
RETREG2-203ENST00000430297 STK3Q13188 491 aa23.2■■□□□ 1.31
RETREG2-203ENST00000430297 EIF4A2Q14240 407 aaKnown RBP23.2■■□□□ 1.31
RETREG2-203ENST00000430297 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
RETREG2-203ENST00000430297 HOOK1Q9UJC3 728 aaKnown RBP23.2■■□□□ 1.3
RETREG2-203ENST00000430297 FKBP4Q02790 459 aaKnown RBP eCLIP23.19■■□□□ 1.3
RETREG2-203ENST00000430297 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
RETREG2-203ENST00000430297 VPS53Q5VIR6 699 aa23.19■■□□□ 1.3
RETREG2-203ENST00000430297 DHX16O60231 1041 aaKnown RBP23.19■■□□□ 1.3
RETREG2-203ENST00000430297 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
RETREG2-203ENST00000430297 PDRG1Q9NUG6 133 aa23.19■■□□□ 1.3
RETREG2-203ENST00000430297 MAST1Q9Y2H9 1570 aa23.19■■□□□ 1.3
RETREG2-203ENST00000430297 LARP1BQ659C4 914 aaKnown RBP23.18■■□□□ 1.3
RETREG2-203ENST00000430297 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
RETREG2-203ENST00000430297 TBC1D32Q96NH3 1257 aa23.18■■□□□ 1.3
RETREG2-203ENST00000430297 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
RETREG2-203ENST00000430297 LETM1O95202 739 aaPredicted RBP23.18■■□□□ 1.3
RETREG2-203ENST00000430297 SART3Q15020 963 aaKnown RBP23.18■■□□□ 1.3
RETREG2-203ENST00000430297 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.18■■□□□ 1.3
RETREG2-203ENST00000430297 MBD5Q9P267 1494 aa23.17■■□□□ 1.3
RETREG2-203ENST00000430297 TPM3P06753 285 aa23.17■■□□□ 1.3
RETREG2-203ENST00000430297 NUCB1Q02818 461 aa23.17■■□□□ 1.3
RETREG2-203ENST00000430297 GCC2Q8IWJ2 1684 aa23.17■■□□□ 1.3
RETREG2-203ENST00000430297 HYPKQ9NX55 129 aa23.17■■□□□ 1.3
RETREG2-203ENST00000430297 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
RETREG2-203ENST00000430297 RAD21O60216 631 aa23.16■■□□□ 1.3
RETREG2-203ENST00000430297 MYD88Q99836 296 aa23.16■■□□□ 1.3
RETREG2-203ENST00000430297 TSPY26PQ9H489 355 aa23.16■■□□□ 1.3
RETREG2-203ENST00000430297 PI4KAP2A4QPH2 592 aa23.16■■□□□ 1.3
RETREG2-203ENST00000430297 MRPL50Q8N5N7 158 aaKnown RBP23.16■■□□□ 1.3
RETREG2-203ENST00000430297 PI4KAP1Q8N8J0 262 aa23.16■■□□□ 1.3
RETREG2-203ENST00000430297 CCDC85AQ96PX6 553 aaPredicted RBP23.16■■□□□ 1.3
RETREG2-203ENST00000430297 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
RETREG2-203ENST00000430297 MEIS3Q99687 375 aa23.16■■□□□ 1.3
RETREG2-203ENST00000430297 VAMP4O75379 141 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 HSP90AA2PQ14568 343 aaPredicted RBP23.15■■□□□ 1.3
RETREG2-203ENST00000430297 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 NPATQ14207 1427 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 KDM4AO75164 1064 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 TPM1P09493 284 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 TSR1Q2NL82 804 aaKnown RBP23.15■■□□□ 1.3
RETREG2-203ENST00000430297 MPHOSPH8Q99549 860 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
RETREG2-203ENST00000430297 ZNF592Q92610 1267 aa23.14■■□□□ 1.3
RETREG2-203ENST00000430297 KINO60870 393 aaKnown RBP23.14■■□□□ 1.29
RETREG2-203ENST00000430297 CEBPZQ03701 1054 aaKnown RBP23.14■■□□□ 1.29
RETREG2-203ENST00000430297 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
RETREG2-203ENST00000430297 GRPEL1Q9HAV7 217 aa23.14■■□□□ 1.29
RETREG2-203ENST00000430297 RRP12Q5JTH9 1297 aaKnown RBP23.14■■□□□ 1.29
RETREG2-203ENST00000430297 CASTP20810 708 aaKnown RBP23.13■■□□□ 1.29
RETREG2-203ENST00000430297 KRT85P78386 507 aa23.13■■□□□ 1.29
RETREG2-203ENST00000430297 KRT32Q14532 448 aa23.13■■□□□ 1.29
RETREG2-203ENST00000430297 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.13■■□□□ 1.29
RETREG2-203ENST00000430297 NUTM2BA6NNL0 878 aaPredicted RBP23.13■■□□□ 1.29
RETREG2-203ENST00000430297 NUTM2EB1AL46 878 aaPredicted RBP23.13■■□□□ 1.29
RETREG2-203ENST00000430297 STARD3NLO95772 234 aa23.13■■□□□ 1.29
RETREG2-203ENST00000430297 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
RETREG2-203ENST00000430297 ANXA1P04083 346 aa23.12■■□□□ 1.29
RETREG2-203ENST00000430297 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms