RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 CCDC66A2RUB6 948 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 HSP90AB2PQ58FF8 381 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
CPS1-203ENST00000430249 BTBD11A6QL63 1104 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 ERLIN1O75477 346 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 ZRSR2Q15696 482 aaKnown RBP8.31□□□□□ -1.08
CPS1-203ENST00000430249 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
CPS1-203ENST00000430249 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
CPS1-203ENST00000430249 KIF1BPQ96EK5 621 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
CPS1-203ENST00000430249 BMP2KQ9NSY1 1161 aaPredicted RBP8.3□□□□□ -1.08
CPS1-203ENST00000430249 PDRG1Q9NUG6 133 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 WDR97A6NE52 1622 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 LARP1Q6PKG0 1096 aaKnown RBP8.3□□□□□ -1.08
CPS1-203ENST00000430249 PPFIBP1Q86W92 1011 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 BACH2Q9BYV9 841 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 BLOC1S2Q6QNY1 142 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 TRIM21P19474 475 aaKnown RBP8.3□□□□□ -1.08
CPS1-203ENST00000430249 IGHMBP2P38935 993 aaKnown RBP8.3□□□□□ -1.08
CPS1-203ENST00000430249 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
CPS1-203ENST00000430249 GLRX3O76003 335 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 KRT18P05783 430 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 NBPF8Q3BBV2 869 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 NUDT16Q96DE0 195 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 SLC4A3P48751 1232 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 IMMTQ16891 758 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 TOM1L2Q6ZVM7 507 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 CEP57L1Q8IYX8 460 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 RBM42Q9BTD8 480 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 PDILTQ8N807 584 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 TNMDQ9H2S6 317 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 SHANK2Q9UPX8 1470 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 NBPF1Q3BBV0 1214 aa8.29□□□□□ -1.08
CPS1-203ENST00000430249 EIF3JO75822 258 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 TMPOP42166 694 aaKnown RBP8.29□□□□□ -1.08
CPS1-203ENST00000430249 CTAGE5O15320 804 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 IKQ13123 557 aaPredicted RBP8.28□□□□□ -1.08
CPS1-203ENST00000430249 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
CPS1-203ENST00000430249 NCBP3Q53F19 620 aaKnown RBP8.28□□□□□ -1.08
CPS1-203ENST00000430249 PDCL2Q8N4E4 241 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 HYPKQ9NX55 129 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 MCM3P25205 808 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 PPP4R3BQ5MIZ7 849 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 AACSQ86V21 672 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 EHMT1Q9H9B1 1298 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 U3KPZ7 1027 aaPredicted RBP8.28□□□□□ -1.08
CPS1-203ENST00000430249 CTTNBP2Q8WZ74 1663 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 SOS1Q07889 1333 aaPredicted RBP8.28□□□□□ -1.08
CPS1-203ENST00000430249 UBAC1Q9BSL1 405 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 UGGT2Q9NYU1 1516 aa8.28□□□□□ -1.08
CPS1-203ENST00000430249 KIF20AO95235 890 aa8.27□□□□□ -1.08
CPS1-203ENST00000430249 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.08
CPS1-203ENST00000430249 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.08
CPS1-203ENST00000430249 GOLGA6L10A6NI86 522 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 FGFR1OPO95684 399 aaKnown RBP8.27□□□□□ -1.09
CPS1-203ENST00000430249 TTC21AQ8NDW8 1320 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 FANCAO15360 1455 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 A0A087WZG4 1122 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 CCDC191Q8NCU4 936 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 FYB1O15117 783 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 TAF7Q15545 349 aaPredicted RBP8.27□□□□□ -1.09
CPS1-203ENST00000430249 GBP3Q9H0R5 595 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
CPS1-203ENST00000430249 PRPF40AO75400 957 aaKnown RBP8.27□□□□□ -1.09
CPS1-203ENST00000430249 TNIP1Q15025 636 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 CCDC178Q5BJE1 867 aa8.27□□□□□ -1.09
CPS1-203ENST00000430249 LARP1BQ659C4 914 aaKnown RBP8.27□□□□□ -1.09
CPS1-203ENST00000430249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPS1-203ENST00000430249 TCOF1Q13428 1488 aaKnown RBP8.27□□□□□ -1.09
CPS1-203ENST00000430249 SERPINC1P01008 464 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 TTF1Q15361 905 aaPredicted RBP8.26□□□□□ -1.09
CPS1-203ENST00000430249 SPATA32Q96LK8 384 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 NEMFO60524 1076 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 CAVIN2O95810 425 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 NUP62CLQ9H1M0 184 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 DMRT2Q9Y5R5 561 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
CPS1-203ENST00000430249 POTEJP0CG39 1038 aa8.26□□□□□ -1.09
CPS1-203ENST00000430249 ZNF397Q8NF99 534 aaPredicted RBP8.26□□□□□ -1.09
CPS1-203ENST00000430249 SCAND2PQ9GZW5 306 aaPredicted RBP8.26□□□□□ -1.09
CPS1-203ENST00000430249 LEKR1Q6ZMV7 388 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 CNKSR2Q8WXI2 1034 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 ARHGAP45Q92619 1136 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 TMOD2Q9NZR1 351 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 MX1P20591 662 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 CALRP27797 417 aaKnown RBP8.25□□□□□ -1.09
CPS1-203ENST00000430249 JAKMIP3Q5VZ66 844 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 IFIT1P09914 478 aaKnown RBP8.25□□□□□ -1.09
CPS1-203ENST00000430249 PDE4CQ08493 712 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 PRDM11Q9NQV5 511 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 ARHGEF12Q9NZN5 1544 aa8.25□□□□□ -1.09
CPS1-203ENST00000430249 CFAP43Q8NDM7 1665 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms