RNA–Protein interactions for RNA: ENST00000429260.6

C9orf116-205, Transcript of chromosome 9 open reading frame 116, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf116, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf116-205ENST00000429260 DDB1Q16531 1140 aa20.09■□□□□ 0.81
C9orf116-205ENST00000429260 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
C9orf116-205ENST00000429260 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
C9orf116-205ENST00000429260 THSD7AQ9UPZ6 1657 aa20.08■□□□□ 0.81
C9orf116-205ENST00000429260 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.81
C9orf116-205ENST00000429260 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.81
C9orf116-205ENST00000429260 DISP2A7MBM2 1401 aa20.08■□□□□ 0.8
C9orf116-205ENST00000429260 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
C9orf116-205ENST00000429260 COL3A1P02461 1466 aaPredicted RBP20.06■□□□□ 0.8
C9orf116-205ENST00000429260 SULT6B1Q6IMI4 303 aa20.05■□□□□ 0.8
C9orf116-205ENST00000429260 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
C9orf116-205ENST00000429260 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
C9orf116-205ENST00000429260 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
C9orf116-205ENST00000429260 MEGF6O75095 1541 aa20.03■□□□□ 0.8
C9orf116-205ENST00000429260 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
C9orf116-205ENST00000429260 ZCRB1Q8TBF4 217 aaKnown RBP20.03■□□□□ 0.8
C9orf116-205ENST00000429260 BRWD3Q6RI45 1802 aa20.02■□□□□ 0.8
C9orf116-205ENST00000429260 HMOX1P09601 288 aa20.02■□□□□ 0.8
C9orf116-205ENST00000429260 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.79
C9orf116-205ENST00000429260 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
C9orf116-205ENST00000429260 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
C9orf116-205ENST00000429260 LRRC37A3O60309 1634 aa20.01■□□□□ 0.79
C9orf116-205ENST00000429260 TNS2Q63HR2 1409 aa20.01■□□□□ 0.79
C9orf116-205ENST00000429260 RGPD1P0DJD0 1748 aa20■□□□□ 0.79
C9orf116-205ENST00000429260 FAM182BQ5T319 152 aa20■□□□□ 0.79
C9orf116-205ENST00000429260 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
C9orf116-205ENST00000429260 SPG7Q9UQ90 795 aa20■□□□□ 0.79
C9orf116-205ENST00000429260 KDRP35968 1356 aa19.99■□□□□ 0.79
C9orf116-205ENST00000429260 PLEKHO1Q53GL0 409 aaPredicted RBP19.98■□□□□ 0.79
C9orf116-205ENST00000429260 DIEXFQ68CQ4 756 aaKnown RBP19.98■□□□□ 0.79
C9orf116-205ENST00000429260 FAM196AQ6ZSG2 479 aa19.98■□□□□ 0.79
C9orf116-205ENST00000429260 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
C9orf116-205ENST00000429260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.97■□□□□ 0.79
C9orf116-205ENST00000429260 AMOTQ4VCS5 1084 aa19.96■□□□□ 0.79
C9orf116-205ENST00000429260 PCDH11XQ9BZA7 1347 aa19.96■□□□□ 0.79
C9orf116-205ENST00000429260 PCDH11YQ9BZA8 1340 aa19.96■□□□□ 0.79
C9orf116-205ENST00000429260 PLEKHG2Q9H7P9 1386 aa19.95■□□□□ 0.79
C9orf116-205ENST00000429260 FCHSD2O94868 740 aa19.95■□□□□ 0.78
C9orf116-205ENST00000429260 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
C9orf116-205ENST00000429260 PRKAR2BP31323 418 aa19.93■□□□□ 0.78
C9orf116-205ENST00000429260 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
C9orf116-205ENST00000429260 ZNF530Q6P9A1 599 aaPredicted RBP19.92■□□□□ 0.78
C9orf116-205ENST00000429260 IFNL2Q8IZJ0 200 aa19.92■□□□□ 0.78
C9orf116-205ENST00000429260 MRS2Q9HD23 443 aa19.92■□□□□ 0.78
C9orf116-205ENST00000429260 CYP27B1O15528 508 aa19.91■□□□□ 0.78
C9orf116-205ENST00000429260 NEFMP07197 916 aa19.91■□□□□ 0.78
C9orf116-205ENST00000429260 CCDC184Q52MB2 194 aa19.91■□□□□ 0.78
C9orf116-205ENST00000429260 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
C9orf116-205ENST00000429260 C1orf141Q5JVX7 400 aa19.9■□□□□ 0.78
C9orf116-205ENST00000429260 RNF39Q9H2S5 420 aa19.9■□□□□ 0.78
C9orf116-205ENST00000429260 PKD1L3Q7Z443 1732 aa19.9■□□□□ 0.78
C9orf116-205ENST00000429260 PHKG2P15735 406 aa19.89■□□□□ 0.77
C9orf116-205ENST00000429260 UPF1Q92900 1129 aaKnown RBP eCLIP19.89■□□□□ 0.77
C9orf116-205ENST00000429260 SHANK3Q9BYB0 1731 aa19.88■□□□□ 0.77
C9orf116-205ENST00000429260 BCL9O00512 1426 aa19.88■□□□□ 0.77
C9orf116-205ENST00000429260 TRIM37O94972 964 aa19.88■□□□□ 0.77
C9orf116-205ENST00000429260 SF3B2Q13435 895 aaKnown RBP19.88■□□□□ 0.77
C9orf116-205ENST00000429260 MTHFSDQ2M296 383 aaKnown RBP19.88■□□□□ 0.77
C9orf116-205ENST00000429260 ACSBG1Q96GR2 724 aa19.88■□□□□ 0.77
C9orf116-205ENST00000429260 SOCS7O14512 581 aa19.87■□□□□ 0.77
C9orf116-205ENST00000429260 HSP90AB1P08238 724 aaKnown RBP19.87■□□□□ 0.77
C9orf116-205ENST00000429260 CCDC125Q86Z20 511 aa19.87■□□□□ 0.77
C9orf116-205ENST00000429260 GAS2L2Q8NHY3 880 aa19.87■□□□□ 0.77
C9orf116-205ENST00000429260 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
C9orf116-205ENST00000429260 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
C9orf116-205ENST00000429260 NKX1-1Q15270 411 aaPredicted RBP19.86■□□□□ 0.77
C9orf116-205ENST00000429260 MAPK8IP3Q9UPT6 1336 aa19.85■□□□□ 0.77
C9orf116-205ENST00000429260 AKAP4Q5JQC9 854 aa19.85■□□□□ 0.77
C9orf116-205ENST00000429260 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
C9orf116-205ENST00000429260 PLEKHF1Q96S99 279 aa19.84■□□□□ 0.77
C9orf116-205ENST00000429260 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
C9orf116-205ENST00000429260 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.77
C9orf116-205ENST00000429260 KCNQ2O43526 872 aa19.83■□□□□ 0.77
C9orf116-205ENST00000429260 PRIM1P49642 420 aaKnown RBP19.83■□□□□ 0.77
C9orf116-205ENST00000429260 DCAF5Q96JK2 942 aa19.83■□□□□ 0.77
C9orf116-205ENST00000429260 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
C9orf116-205ENST00000429260 APBA3O96018 575 aa19.81■□□□□ 0.76
C9orf116-205ENST00000429260 MPRIPQ6WCQ1 1025 aa19.81■□□□□ 0.76
C9orf116-205ENST00000429260 CCDC146Q8IYE0 955 aa19.81■□□□□ 0.76
C9orf116-205ENST00000429260 RUNDC1Q96C34 613 aa19.81■□□□□ 0.76
C9orf116-205ENST00000429260 GNAT3A8MTJ3 354 aa19.8■□□□□ 0.76
C9orf116-205ENST00000429260 CCER2I3L3R5 266 aa19.8■□□□□ 0.76
C9orf116-205ENST00000429260 MIER1Q8N108 512 aa19.8■□□□□ 0.76
C9orf116-205ENST00000429260 SBF2Q86WG5 1849 aa19.79■□□□□ 0.76
C9orf116-205ENST00000429260 BAG6P46379 1132 aa19.79■□□□□ 0.76
C9orf116-205ENST00000429260 PTF1AQ7RTS3 328 aa19.79■□□□□ 0.76
C9orf116-205ENST00000429260 EP400Q96L91 3159 aa19.79■□□□□ 0.76
C9orf116-205ENST00000429260 MAP3K5Q99683 1374 aa19.79■□□□□ 0.76
C9orf116-205ENST00000429260 ERVV-2B6SEH9 535 aa19.78■□□□□ 0.76
C9orf116-205ENST00000429260 RNMTO43148 476 aaKnown RBP19.78■□□□□ 0.76
C9orf116-205ENST00000429260 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
C9orf116-205ENST00000429260 DOT1LQ8TEK3 1739 aa19.77■□□□□ 0.76
C9orf116-205ENST00000429260 NFE2L2Q16236 605 aa19.77■□□□□ 0.76
C9orf116-205ENST00000429260 FAM9BQ8IZU0 186 aa19.77■□□□□ 0.76
C9orf116-205ENST00000429260 LGR6Q9HBX8 967 aa19.77■□□□□ 0.76
C9orf116-205ENST00000429260 TMOD3Q9NYL9 352 aa19.77■□□□□ 0.76
C9orf116-205ENST00000429260 ZNF219Q9P2Y4 722 aaPredicted RBP19.77■□□□□ 0.76
C9orf116-205ENST00000429260 NHSQ6T4R5 1651 aa19.77■□□□□ 0.76
C9orf116-205ENST00000429260 KDM6AO15550 1401 aaPredicted RBP19.76■□□□□ 0.75
C9orf116-205ENST00000429260 CABP4P57796 275 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms