RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.93■□□□□ 0.94
PCDH8P1-201ENST00000428983 NGDNQ8NEJ9 315 aaKnown RBP20.92■□□□□ 0.94
PCDH8P1-201ENST00000428983 NECTIN2Q92692 538 aa20.92■□□□□ 0.94
PCDH8P1-201ENST00000428983 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
PCDH8P1-201ENST00000428983 AATKQ6ZMQ8 1374 aa20.91■□□□□ 0.94
PCDH8P1-201ENST00000428983 C16orf71Q8IYS4 520 aaPredicted RBP20.91■□□□□ 0.94
PCDH8P1-201ENST00000428983 GAS2L2Q8NHY3 880 aa20.91■□□□□ 0.94
PCDH8P1-201ENST00000428983 ISY1Q9ULR0 285 aaKnown RBP20.9■□□□□ 0.94
PCDH8P1-201ENST00000428983 MAP3K19Q56UN5 1328 aa20.9■□□□□ 0.94
PCDH8P1-201ENST00000428983 CALD1Q05682 793 aaKnown RBP20.89■□□□□ 0.93
PCDH8P1-201ENST00000428983 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
PCDH8P1-201ENST00000428983 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
PCDH8P1-201ENST00000428983 EID1Q9Y6B2 187 aa20.88■□□□□ 0.93
PCDH8P1-201ENST00000428983 MTHFSDQ2M296 383 aaKnown RBP20.88■□□□□ 0.93
PCDH8P1-201ENST00000428983 CIZ1Q9ULV3 898 aaPredicted RBP20.88■□□□□ 0.93
PCDH8P1-201ENST00000428983 F6X3S4 739 aa20.87■□□□□ 0.93
PCDH8P1-201ENST00000428983 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
PCDH8P1-201ENST00000428983 NASPP49321 788 aaPredicted RBP20.87■□□□□ 0.93
PCDH8P1-201ENST00000428983 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
PCDH8P1-201ENST00000428983 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
PCDH8P1-201ENST00000428983 OTUD7AQ8TE49 926 aaPredicted RBP20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 TECPR2O15040 1411 aa20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 K7ELQ4 463 aaPredicted RBP20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 SMARCA5O60264 1052 aaPredicted RBP20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 SKOR2Q2VWA4 1001 aaPredicted RBP20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 SLC4A10Q6U841 1118 aa20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 G2E3Q7L622 706 aa20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 ABCC4O15439 1325 aa20.86■□□□□ 0.93
PCDH8P1-201ENST00000428983 ZBTB7CA1YPR0 619 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 LMOD3Q0VAK6 560 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 C3P01024 1663 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 USP6P35125 1406 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 AMPHP49418 695 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 BMP2KLQ5H9B9 411 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 DDX49Q9Y6V7 483 aaKnown RBP20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 MON2Q7Z3U7 1717 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 PLEKHG3A1L390 1219 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 NLRP6P59044 892 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
PCDH8P1-201ENST00000428983 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
PCDH8P1-201ENST00000428983 KCNA6P17658 529 aa20.84■□□□□ 0.93
PCDH8P1-201ENST00000428983 EYA1Q99502 592 aa20.83■□□□□ 0.93
PCDH8P1-201ENST00000428983 RIMS1Q86UR5 1692 aaKnown RBP20.83■□□□□ 0.93
PCDH8P1-201ENST00000428983 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
PCDH8P1-201ENST00000428983 BRPF1P55201 1214 aaPredicted RBP20.83■□□□□ 0.92
PCDH8P1-201ENST00000428983 MEIS3Q99687 375 aa20.83■□□□□ 0.92
PCDH8P1-201ENST00000428983 CHL1O00533 1208 aa20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 PTCH1Q13635 1447 aa20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 BAG4O95429 457 aaKnown RBP20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 NCLP19338 710 aaKnown RBP20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 RBM10P98175 930 aaKnown RBP20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 PEAK1Q9H792 1746 aa20.82■□□□□ 0.92
PCDH8P1-201ENST00000428983 OVOS2A0A0J9YW53 1432 aa20.81■□□□□ 0.92
PCDH8P1-201ENST00000428983 OVOS2Q6IE36 1432 aa20.81■□□□□ 0.92
PCDH8P1-201ENST00000428983 ZNF428Q96B54 188 aa20.81■□□□□ 0.92
PCDH8P1-201ENST00000428983 CCDC173Q0VFZ6 552 aa20.81■□□□□ 0.92
PCDH8P1-201ENST00000428983 AKAP12Q02952 1782 aa20.81■□□□□ 0.92
PCDH8P1-201ENST00000428983 PLEKHG1Q9ULL1 1385 aa20.81■□□□□ 0.92
PCDH8P1-201ENST00000428983 PPP1R9BQ96SB3 815 aa20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 API5Q9BZZ5 524 aaKnown RBP20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 TSPYL4Q9UJ04 414 aa20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 PKP1Q13835 747 aa20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 ZSCAN30Q86W11 494 aa20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 RGPD8O14715 1765 aaPredicted RBP20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 TPM2P07951 284 aa20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 MCTP1Q6DN14 999 aa20.8■□□□□ 0.92
PCDH8P1-201ENST00000428983 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
PCDH8P1-201ENST00000428983 CAVIN1Q6NZI2 390 aaKnown RBP20.78■□□□□ 0.92
PCDH8P1-201ENST00000428983 MSH6P52701 1360 aa20.78■□□□□ 0.92
PCDH8P1-201ENST00000428983 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
PCDH8P1-201ENST00000428983 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
PCDH8P1-201ENST00000428983 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
PCDH8P1-201ENST00000428983 KLHL40Q2TBA0 621 aa20.77■□□□□ 0.92
PCDH8P1-201ENST00000428983 GOLGA6L22H0YM25 854 aa20.76■□□□□ 0.91
PCDH8P1-201ENST00000428983 TSHZ3Q63HK5 1081 aa20.76■□□□□ 0.91
PCDH8P1-201ENST00000428983 ABTB2Q8N961 1025 aa20.76■□□□□ 0.91
PCDH8P1-201ENST00000428983 SETD1BQ9UPS6 1966 aaKnown RBP20.76■□□□□ 0.91
PCDH8P1-201ENST00000428983 PIK3R4Q99570 1358 aa20.76■□□□□ 0.91
PCDH8P1-201ENST00000428983 MSNP26038 577 aaKnown RBP20.75■□□□□ 0.91
PCDH8P1-201ENST00000428983 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
PCDH8P1-201ENST00000428983 OFD1O75665 1012 aa20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 PLEKHM2Q8IWE5 1019 aa20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 ANP32BQ92688 251 aaKnown RBP20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 PDCL3Q9H2J4 239 aa20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 RGS12O14924 1447 aa20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 RBSNQ9H1K0 784 aa20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 R3HCC1Q9Y3T6 440 aaKnown RBP20.74■□□□□ 0.91
PCDH8P1-201ENST00000428983 CEP170BQ9Y4F5 1589 aaPredicted RBP20.73■□□□□ 0.91
PCDH8P1-201ENST00000428983 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
PCDH8P1-201ENST00000428983 RBM27Q9P2N5 1060 aaKnown RBP20.73■□□□□ 0.91
PCDH8P1-201ENST00000428983 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
PCDH8P1-201ENST00000428983 CRB1P82279 1406 aa20.72■□□□□ 0.91
PCDH8P1-201ENST00000428983 PTMSP20962 102 aa20.72■□□□□ 0.91
PCDH8P1-201ENST00000428983 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
PCDH8P1-201ENST00000428983 TBX22Q9Y458 520 aa20.72■□□□□ 0.91
PCDH8P1-201ENST00000428983 THEMISQ8N1K5 641 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms