RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RNF217Q8TC41 542 aa10.72□□□□□ -0.69
HMGB3P5-201ENST00000428894 WIPF1O43516 503 aa10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 ERBB4Q15303 1308 aa10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 SLFNL1Q499Z3 407 aa10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 PHTF2Q8N3S3 785 aa10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 POM121Q96HA1 1249 aa10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
HMGB3P5-201ENST00000428894 MEN1O00255 615 aa10.7□□□□□ -0.7
HMGB3P5-201ENST00000428894 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
HMGB3P5-201ENST00000428894 TSGA10IPQ3SY00 556 aa10.7□□□□□ -0.7
HMGB3P5-201ENST00000428894 CYP2U1Q7Z449 544 aa10.7□□□□□ -0.7
HMGB3P5-201ENST00000428894 RNF135Q8IUD6 432 aa10.7□□□□□ -0.7
HMGB3P5-201ENST00000428894 A0A1W2PRU2 124 aa10.69□□□□□ -0.7
HMGB3P5-201ENST00000428894 RAD21O60216 631 aa10.69□□□□□ -0.7
HMGB3P5-201ENST00000428894 GMPRP36959 345 aa10.69□□□□□ -0.7
HMGB3P5-201ENST00000428894 TRAK2O60296 914 aa10.68□□□□□ -0.7
HMGB3P5-201ENST00000428894 MYCP01106 439 aaPredicted RBP10.68□□□□□ -0.7
HMGB3P5-201ENST00000428894 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
HMGB3P5-201ENST00000428894 RNF144AP50876 292 aaPredicted RBP10.68□□□□□ -0.7
HMGB3P5-201ENST00000428894 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
HMGB3P5-201ENST00000428894 SOX11P35716 441 aa10.67□□□□□ -0.7
HMGB3P5-201ENST00000428894 LYSMD3Q7Z3D4 306 aa10.67□□□□□ -0.7
HMGB3P5-201ENST00000428894 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
HMGB3P5-201ENST00000428894 NLRP3Q96P20 1036 aa10.67□□□□□ -0.7
HMGB3P5-201ENST00000428894 DOLKQ9UPQ8 538 aa10.67□□□□□ -0.7
HMGB3P5-201ENST00000428894 SLC35F4A4IF30 521 aa10.66□□□□□ -0.7
HMGB3P5-201ENST00000428894 PRICKLE2Q7Z3G6 844 aa10.66□□□□□ -0.7
HMGB3P5-201ENST00000428894 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
HMGB3P5-201ENST00000428894 GNRH1P01148 92 aa10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 GPC1P35052 558 aa10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 USP4Q13107 963 aa10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 CLN3Q13286 438 aa10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
HMGB3P5-201ENST00000428894 RHOQP17081 205 aa10.63□□□□□ -0.71
HMGB3P5-201ENST00000428894 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
HMGB3P5-201ENST00000428894 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
HMGB3P5-201ENST00000428894 SLC27A3Q5K4L6 730 aa10.62□□□□□ -0.71
HMGB3P5-201ENST00000428894 SENP3-EIF4A1A0A087X0R7 540 aa10.61□□□□□ -0.71
HMGB3P5-201ENST00000428894 PLPP7Q8NBV4 271 aa10.61□□□□□ -0.71
HMGB3P5-201ENST00000428894 SIRT1Q96EB6 747 aa10.61□□□□□ -0.71
HMGB3P5-201ENST00000428894 ALG2Q9H553 416 aa10.61□□□□□ -0.71
HMGB3P5-201ENST00000428894 ITGA6P23229 1130 aa10.6□□□□□ -0.71
HMGB3P5-201ENST00000428894 MAP7D1Q3KQU3 841 aa10.6□□□□□ -0.71
HMGB3P5-201ENST00000428894 GRIP2Q9C0E4 1043 aa10.6□□□□□ -0.71
HMGB3P5-201ENST00000428894 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 IL2RAP01589 272 aa10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 POU4F2Q12837 409 aa10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 NANOS1Q8WY41 292 aaKnown RBP10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 ESYT1Q9BSJ8 1104 aa10.59□□□□□ -0.71
HMGB3P5-201ENST00000428894 VWA5B2Q8N398 1253 aa10.58□□□□□ -0.72
HMGB3P5-201ENST00000428894 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
HMGB3P5-201ENST00000428894 CDC14CA4D256 554 aa10.57□□□□□ -0.72
HMGB3P5-201ENST00000428894 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
HMGB3P5-201ENST00000428894 CENPCQ03188 943 aa10.57□□□□□ -0.72
HMGB3P5-201ENST00000428894 ESCO1Q5FWF5 840 aa10.56□□□□□ -0.72
HMGB3P5-201ENST00000428894 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
HMGB3P5-201ENST00000428894 CLUAP1Q96AJ1 413 aa10.56□□□□□ -0.72
HMGB3P5-201ENST00000428894 STAU1O95793 577 aaKnown RBP10.55□□□□□ -0.72
HMGB3P5-201ENST00000428894 SKIP12755 728 aa10.55□□□□□ -0.72
HMGB3P5-201ENST00000428894 SPATA31C2B4DYI2 1134 aa10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 NBPF10Q6P3W6 841 aaKnown RBP10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 NBPF15Q8N660 670 aa10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 ZSCAN10Q96SZ4 725 aaPredicted RBP10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 ETNK1Q9HBU6 452 aa10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 STK17AQ9UEE5 414 aa10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 HRH3Q9Y5N1 445 aa10.54□□□□□ -0.72
HMGB3P5-201ENST00000428894 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
HMGB3P5-201ENST00000428894 TAS1R3Q7RTX0 852 aa10.53□□□□□ -0.72
HMGB3P5-201ENST00000428894 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
HMGB3P5-201ENST00000428894 CUEDC1Q9NWM3 386 aaPredicted RBP10.53□□□□□ -0.72
HMGB3P5-201ENST00000428894 WASLO00401 505 aaPredicted RBP10.52□□□□□ -0.73
HMGB3P5-201ENST00000428894 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
HMGB3P5-201ENST00000428894 ADAMTS19Q8TE59 1207 aa10.52□□□□□ -0.73
HMGB3P5-201ENST00000428894 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
HMGB3P5-201ENST00000428894 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
HMGB3P5-201ENST00000428894 DYRK1BQ9Y463 629 aa10.52□□□□□ -0.73
HMGB3P5-201ENST00000428894 GTF2E1P29083 439 aaPredicted RBP10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 EML3Q32P44 896 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 WDR44Q5JSH3 913 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 CNTNAP3BQ96NU0 1288 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 CNTNAP3Q9BZ76 1288 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 FHDC1Q9C0D6 1143 aaPredicted RBP10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 TIMMDC1Q9NPL8 285 aa10.51□□□□□ -0.73
HMGB3P5-201ENST00000428894 GDF10P55107 478 aa10.5□□□□□ -0.73
HMGB3P5-201ENST00000428894 KRT76Q01546 638 aa10.5□□□□□ -0.73
HMGB3P5-201ENST00000428894 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
HMGB3P5-201ENST00000428894 PROSER2Q86WR7 435 aaPredicted RBP10.5□□□□□ -0.73
HMGB3P5-201ENST00000428894 LZTS3O60299 673 aaPredicted RBP10.49□□□□□ -0.73
HMGB3P5-201ENST00000428894 PHKA2P46019 1235 aa10.49□□□□□ -0.73
HMGB3P5-201ENST00000428894 SCNN1DP51172 638 aa10.49□□□□□ -0.73
HMGB3P5-201ENST00000428894 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
HMGB3P5-201ENST00000428894 NOD1Q9Y239 953 aa10.49□□□□□ -0.73
HMGB3P5-201ENST00000428894 INHAP05111 366 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms