RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
LINC00348-201ENST00000428761 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
LINC00348-201ENST00000428761 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
LINC00348-201ENST00000428761 CBLBQ13191 982 aa9.44□□□□□ -0.9
LINC00348-201ENST00000428761 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
LINC00348-201ENST00000428761 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
LINC00348-201ENST00000428761 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
LINC00348-201ENST00000428761 Q6ZVU0 165 aa9.43□□□□□ -0.9
LINC00348-201ENST00000428761 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
LINC00348-201ENST00000428761 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
LINC00348-201ENST00000428761 LILRA1O75019 489 aa9.42□□□□□ -0.9
LINC00348-201ENST00000428761 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
LINC00348-201ENST00000428761 EIF4G2P78344 907 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC00348-201ENST00000428761 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
LINC00348-201ENST00000428761 ZNF784Q8NCA9 323 aaPredicted RBP9.42□□□□□ -0.9
LINC00348-201ENST00000428761 SOS2Q07890 1332 aaPredicted RBP9.41□□□□□ -0.9
LINC00348-201ENST00000428761 DNMT3LQ9UJW3 386 aa9.41□□□□□ -0.9
LINC00348-201ENST00000428761 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
LINC00348-201ENST00000428761 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
LINC00348-201ENST00000428761 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
LINC00348-201ENST00000428761 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
LINC00348-201ENST00000428761 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
LINC00348-201ENST00000428761 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
LINC00348-201ENST00000428761 KDF1Q8NAX2 398 aaPredicted RBP9.38□□□□□ -0.91
LINC00348-201ENST00000428761 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
LINC00348-201ENST00000428761 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
LINC00348-201ENST00000428761 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
LINC00348-201ENST00000428761 CCDC85AQ96PX6 553 aaPredicted RBP9.37□□□□□ -0.91
LINC00348-201ENST00000428761 FIGNL2A6NMB9 653 aa9.36□□□□□ -0.91
LINC00348-201ENST00000428761 TTLL8A6PVC2 850 aa9.36□□□□□ -0.91
LINC00348-201ENST00000428761 PDE4CQ08493 712 aa9.36□□□□□ -0.91
LINC00348-201ENST00000428761 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.36□□□□□ -0.91
LINC00348-201ENST00000428761 GLMNQ92990 594 aa9.36□□□□□ -0.91
LINC00348-201ENST00000428761 ALG2Q9H553 416 aa9.36□□□□□ -0.91
LINC00348-201ENST00000428761 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
LINC00348-201ENST00000428761 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
LINC00348-201ENST00000428761 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
LINC00348-201ENST00000428761 SOX11P35716 441 aa9.35□□□□□ -0.91
LINC00348-201ENST00000428761 ERVK-9P63128 1117 aa9.35□□□□□ -0.91
LINC00348-201ENST00000428761 SEMA3FQ13275 785 aa9.35□□□□□ -0.91
LINC00348-201ENST00000428761 GPR161Q8N6U8 529 aaKnown RBP9.35□□□□□ -0.91
LINC00348-201ENST00000428761 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
LINC00348-201ENST00000428761 SPINT1O43278 529 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 ADH1AP07327 375 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 SCTRP47872 440 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 RELBQ01201 579 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 PTSQ03393 145 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 CNTNAP3BQ96NU0 1288 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 CNTNAP3Q9BZ76 1288 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 CHIC2Q9UKJ5 165 aa9.34□□□□□ -0.91
LINC00348-201ENST00000428761 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
LINC00348-201ENST00000428761 ZNF395Q9H8N7 513 aaPredicted RBP9.33□□□□□ -0.92
LINC00348-201ENST00000428761 PTGIRP43119 386 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 KRT76Q01546 638 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 KCNMA1Q12791 1236 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 ADAMTS19Q8TE59 1207 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
LINC00348-201ENST00000428761 RGS22Q8NE09 1264 aa9.31□□□□□ -0.92
LINC00348-201ENST00000428761 OSBPL3Q9H4L5 887 aa9.31□□□□□ -0.92
LINC00348-201ENST00000428761 TMCO4Q5TGY1 634 aa9.3□□□□□ -0.92
LINC00348-201ENST00000428761 PBXIP1Q96AQ6 731 aa9.3□□□□□ -0.92
LINC00348-201ENST00000428761 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
LINC00348-201ENST00000428761 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
LINC00348-201ENST00000428761 PIK3CDO00329 1044 aa9.29□□□□□ -0.92
LINC00348-201ENST00000428761 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
LINC00348-201ENST00000428761 CCDC155Q8N6L0 562 aa9.29□□□□□ -0.92
LINC00348-201ENST00000428761 GZF1Q9H116 711 aaPredicted RBP9.29□□□□□ -0.92
LINC00348-201ENST00000428761 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
LINC00348-201ENST00000428761 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
LINC00348-201ENST00000428761 GSK3AP49840 483 aa9.28□□□□□ -0.92
LINC00348-201ENST00000428761 SRPK2P78362 688 aaKnown RBP9.28□□□□□ -0.92
LINC00348-201ENST00000428761 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
LINC00348-201ENST00000428761 ADAMTS8Q9UP79 889 aa9.28□□□□□ -0.92
LINC00348-201ENST00000428761 DOLKQ9UPQ8 538 aa9.28□□□□□ -0.92
LINC00348-201ENST00000428761 LOC100996750A0A140TA64 210 aa9.27□□□□□ -0.93
LINC00348-201ENST00000428761 TMEM151AQ8N4L1 468 aa9.27□□□□□ -0.93
LINC00348-201ENST00000428761 KRTAP4-6Q9BYQ5 205 aa9.27□□□□□ -0.93
LINC00348-201ENST00000428761 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
LINC00348-201ENST00000428761 USP4Q13107 963 aa9.26□□□□□ -0.93
LINC00348-201ENST00000428761 SUZ12Q15022 739 aaKnown RBP9.26□□□□□ -0.93
LINC00348-201ENST00000428761 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
LINC00348-201ENST00000428761 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
LINC00348-201ENST00000428761 USTQ9Y2C2 406 aa9.26□□□□□ -0.93
LINC00348-201ENST00000428761 GDF11O95390 407 aa9.25□□□□□ -0.93
LINC00348-201ENST00000428761 RASSF7Q02833 373 aa9.25□□□□□ -0.93
LINC00348-201ENST00000428761 RNFT1Q5M7Z0 435 aa9.25□□□□□ -0.93
LINC00348-201ENST00000428761 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
LINC00348-201ENST00000428761 CYP2U1Q7Z449 544 aa9.25□□□□□ -0.93
LINC00348-201ENST00000428761 VWA5B2Q8N398 1253 aa9.25□□□□□ -0.93
LINC00348-201ENST00000428761 NANOS1Q8WY41 292 aaKnown RBP9.25□□□□□ -0.93
LINC00348-201ENST00000428761 ESF1Q9H501 851 aaKnown RBP9.25□□□□□ -0.93
LINC00348-201ENST00000428761 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
LINC00348-201ENST00000428761 CDC14CA4D256 554 aa9.24□□□□□ -0.93
LINC00348-201ENST00000428761 BRD1O95696 1058 aa9.24□□□□□ -0.93
LINC00348-201ENST00000428761 MYCP01106 439 aaPredicted RBP9.24□□□□□ -0.93
LINC00348-201ENST00000428761 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
LINC00348-201ENST00000428761 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
LINC00348-201ENST00000428761 FOXD4L5Q5VV16 416 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms