RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
CSTF1-203ENST00000428552 COL23A1Q86Y22 540 aaPredicted RBP11.61□□□□□ -0.55
CSTF1-203ENST00000428552 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
CSTF1-203ENST00000428552 HSPA6P17066 643 aa11.59□□□□□ -0.55
CSTF1-203ENST00000428552 MEGF6O75095 1541 aa11.59□□□□□ -0.55
CSTF1-203ENST00000428552 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
CSTF1-203ENST00000428552 KAT6BQ8WYB5 2073 aa11.58□□□□□ -0.56
CSTF1-203ENST00000428552 MSL1Q68DK7 614 aa11.58□□□□□ -0.56
CSTF1-203ENST00000428552 IP6K1Q92551 441 aa11.58□□□□□ -0.56
CSTF1-203ENST00000428552 EDC4Q6P2E9 1401 aaKnown RBP11.58□□□□□ -0.56
CSTF1-203ENST00000428552 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
CSTF1-203ENST00000428552 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
CSTF1-203ENST00000428552 C5P01031 1676 aa11.57□□□□□ -0.56
CSTF1-203ENST00000428552 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
CSTF1-203ENST00000428552 CCNL1Q9UK58 526 aaPredicted RBP11.57□□□□□ -0.56
CSTF1-203ENST00000428552 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
CSTF1-203ENST00000428552 AMIGO3Q86WK7 504 aa11.56□□□□□ -0.56
CSTF1-203ENST00000428552 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
CSTF1-203ENST00000428552 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
CSTF1-203ENST00000428552 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
CSTF1-203ENST00000428552 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
CSTF1-203ENST00000428552 FBLN1P23142 703 aa11.55□□□□□ -0.56
CSTF1-203ENST00000428552 LTV1Q96GA3 475 aaPredicted RBP11.55□□□□□ -0.56
CSTF1-203ENST00000428552 KIF3CO14782 793 aa11.54□□□□□ -0.56
CSTF1-203ENST00000428552 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
CSTF1-203ENST00000428552 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
CSTF1-203ENST00000428552 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
CSTF1-203ENST00000428552 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
CSTF1-203ENST00000428552 MSH5O43196 834 aa11.53□□□□□ -0.56
CSTF1-203ENST00000428552 HOXC9P31274 260 aa11.53□□□□□ -0.56
CSTF1-203ENST00000428552 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
CSTF1-203ENST00000428552 USP47Q96K76 1375 aa11.53□□□□□ -0.56
CSTF1-203ENST00000428552 C4BP0C0L5 1744 aa11.52□□□□□ -0.57
CSTF1-203ENST00000428552 NBPF6Q5VWK0 638 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 HDGFL2Q7Z4V5 671 aaPredicted RBP11.51□□□□□ -0.57
CSTF1-203ENST00000428552 DNAJC5GQ8N7S2 189 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 NBPF4Q96M43 638 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 IGSF1Q8N6C5 1336 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 KIAA1551Q9HCM1 1747 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
CSTF1-203ENST00000428552 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
CSTF1-203ENST00000428552 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
CSTF1-203ENST00000428552 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
CSTF1-203ENST00000428552 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
CSTF1-203ENST00000428552 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
CSTF1-203ENST00000428552 TERF2IPQ9NYB0 399 aa11.48□□□□□ -0.57
CSTF1-203ENST00000428552 RTL1A6NKG5 1358 aa11.48□□□□□ -0.57
CSTF1-203ENST00000428552 ITGB4P16144 1822 aa11.47□□□□□ -0.57
CSTF1-203ENST00000428552 CYP27B1O15528 508 aa11.47□□□□□ -0.57
CSTF1-203ENST00000428552 NCBP3Q53F19 620 aaKnown RBP11.47□□□□□ -0.57
CSTF1-203ENST00000428552 PUS7Q96PZ0 661 aaKnown RBP11.47□□□□□ -0.57
CSTF1-203ENST00000428552 CGNL1Q0VF96 1302 aa11.46□□□□□ -0.57
CSTF1-203ENST00000428552 AMPHP49418 695 aa11.46□□□□□ -0.57
CSTF1-203ENST00000428552 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.57
CSTF1-203ENST00000428552 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
CSTF1-203ENST00000428552 PXDNLA1KZ92 1463 aa11.45□□□□□ -0.58
CSTF1-203ENST00000428552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
CSTF1-203ENST00000428552 APLP1P51693 650 aa11.45□□□□□ -0.58
CSTF1-203ENST00000428552 COG3Q96JB2 828 aa11.45□□□□□ -0.58
CSTF1-203ENST00000428552 TESK2Q96S53 571 aa11.45□□□□□ -0.58
CSTF1-203ENST00000428552 CARD11Q9BXL7 1154 aa11.45□□□□□ -0.58
CSTF1-203ENST00000428552 PKD1L3Q7Z443 1732 aa11.45□□□□□ -0.58
CSTF1-203ENST00000428552 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 PHF14O94880 888 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 NEUROD1Q13562 356 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 PIGBQ92521 554 aa11.44□□□□□ -0.58
CSTF1-203ENST00000428552 NCAPD2Q15021 1401 aa11.43□□□□□ -0.58
CSTF1-203ENST00000428552 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
CSTF1-203ENST00000428552 SSFA2P28290 1259 aa11.43□□□□□ -0.58
CSTF1-203ENST00000428552 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
CSTF1-203ENST00000428552 AK7Q96M32 723 aa11.43□□□□□ -0.58
CSTF1-203ENST00000428552 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
CSTF1-203ENST00000428552 INSRP06213 1382 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 FYB1O15117 783 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 TOMM70O94826 608 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
CSTF1-203ENST00000428552 ITPK1Q13572 414 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 NMRK2Q9NPI5 230 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
CSTF1-203ENST00000428552 BRCA1P38398 1863 aaKnown RBP11.41□□□□□ -0.58
CSTF1-203ENST00000428552 HTRA3P83110 453 aa11.41□□□□□ -0.58
CSTF1-203ENST00000428552 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
CSTF1-203ENST00000428552 COL13A1Q5TAT6 717 aaPredicted RBP11.41□□□□□ -0.58
CSTF1-203ENST00000428552 SMARCC1Q92922 1105 aaPredicted RBP11.41□□□□□ -0.58
CSTF1-203ENST00000428552 C10orf71Q711Q0 1435 aa11.41□□□□□ -0.58
CSTF1-203ENST00000428552 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
CSTF1-203ENST00000428552 SIK1P57059 783 aa11.4□□□□□ -0.58
CSTF1-203ENST00000428552 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
CSTF1-203ENST00000428552 GGNBP2Q9H3C7 697 aa11.4□□□□□ -0.58
CSTF1-203ENST00000428552 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
CSTF1-203ENST00000428552 PCNTO95613 3336 aa11.39□□□□□ -0.59
CSTF1-203ENST00000428552 MMP10P09238 476 aa11.39□□□□□ -0.59
CSTF1-203ENST00000428552 FLT4P35916 1363 aa11.39□□□□□ -0.59
CSTF1-203ENST00000428552 A0A0G2JLW4 131 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms